RNA–Protein interactions for RNA: ENST00000561164.1

MARK3-224, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 4

Gene MARK3, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-224ENST00000561164 TTBK2Q6IQ55 1244 aa9.56□□□□□ -0.88
MARK3-224ENST00000561164 USP48Q86UV5 1035 aa9.56□□□□□ -0.88
MARK3-224ENST00000561164 RELL1Q8IUW5 271 aa9.56□□□□□ -0.88
MARK3-224ENST00000561164 RSRP1Q9BUV0 290 aa9.56□□□□□ -0.88
MARK3-224ENST00000561164 A0A0A0MRY4 1105 aa9.55□□□□□ -0.88
MARK3-224ENST00000561164 LIG3P49916 1009 aa9.55□□□□□ -0.88
MARK3-224ENST00000561164 AP3B2Q13367 1082 aa9.55□□□□□ -0.88
MARK3-224ENST00000561164 ZNF394Q53GI3 561 aa9.55□□□□□ -0.88
MARK3-224ENST00000561164 PCNX4Q63HM2 1172 aa9.55□□□□□ -0.88
MARK3-224ENST00000561164 SULF2Q8IWU5 870 aa9.55□□□□□ -0.88
MARK3-224ENST00000561164 DCAF11Q8TEB1 546 aa9.55□□□□□ -0.88
MARK3-224ENST00000561164 COPRSQ9NQ92 184 aa9.55□□□□□ -0.88
MARK3-224ENST00000561164 KBTBD4Q9NVX7 518 aa9.55□□□□□ -0.88
MARK3-224ENST00000561164 F6X3S4 739 aa9.54□□□□□ -0.88
MARK3-224ENST00000561164 DEAF1O75398 565 aaPredicted RBP9.54□□□□□ -0.88
MARK3-224ENST00000561164 SUZ12Q15022 739 aaKnown RBP9.54□□□□□ -0.88
MARK3-224ENST00000561164 FMR1NBQ8N0W7 255 aaPredicted RBP9.54□□□□□ -0.88
MARK3-224ENST00000561164 GALNT11Q8NCW6 608 aa9.54□□□□□ -0.88
MARK3-224ENST00000561164 KLHDC7BQ96G42 594 aa9.54□□□□□ -0.88
MARK3-224ENST00000561164 ADAMTS8Q9UP79 889 aa9.54□□□□□ -0.88
MARK3-224ENST00000561164 PCDHGB7Q9Y5F8 929 aa9.54□□□□□ -0.88
MARK3-224ENST00000561164 CYP11A1P05108 521 aa9.53□□□□□ -0.88
MARK3-224ENST00000561164 GBP2P32456 591 aaPredicted RBP9.53□□□□□ -0.88
MARK3-224ENST00000561164 RAD51AP2Q09MP3 1159 aa9.53□□□□□ -0.88
MARK3-224ENST00000561164 BEND7Q8N7W2 519 aaPredicted RBP9.53□□□□□ -0.88
MARK3-224ENST00000561164 TMEM74Q96NL1 305 aa9.53□□□□□ -0.88
MARK3-224ENST00000561164 EMILIN2Q9BXX0 1053 aa9.53□□□□□ -0.88
MARK3-224ENST00000561164 TGIF2Q9GZN2 237 aa9.53□□□□□ -0.88
MARK3-224ENST00000561164 CCSER2Q9H7U1 834 aa9.53□□□□□ -0.88
MARK3-224ENST00000561164 CBX8Q9HC52 389 aa9.53□□□□□ -0.88
MARK3-224ENST00000561164 NOP53Q9NZM5 478 aaKnown RBP9.53□□□□□ -0.88
MARK3-224ENST00000561164 LMNB1P20700 586 aa9.52□□□□□ -0.89
MARK3-224ENST00000561164 ARNTP27540 789 aa9.52□□□□□ -0.89
MARK3-224ENST00000561164 CD68P34810 354 aaPredicted RBP9.52□□□□□ -0.89
MARK3-224ENST00000561164 NLRP12P59046 1061 aa9.52□□□□□ -0.89
MARK3-224ENST00000561164 RPS26P62854 115 aaKnown RBP9.52□□□□□ -0.89
MARK3-224ENST00000561164 TRIM28Q13263 835 aaKnown RBP9.52□□□□□ -0.89
MARK3-224ENST00000561164 FBXO11Q86XK2 927 aa9.52□□□□□ -0.89
MARK3-224ENST00000561164 ZNF654Q8IZM8 581 aa9.52□□□□□ -0.89
MARK3-224ENST00000561164 CORO1BQ9BR76 489 aa9.52□□□□□ -0.89
MARK3-224ENST00000561164 DDX41Q9UJV9 622 aaKnown RBP9.52□□□□□ -0.89
MARK3-224ENST00000561164 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.52□□□□□ -0.89
MARK3-224ENST00000561164 CNTNAP5Q8WYK1 1306 aa9.52□□□□□ -0.89
MARK3-224ENST00000561164 MINDY4BA8MYZ0 360 aa9.51□□□□□ -0.89
MARK3-224ENST00000561164 TM4SF5O14894 197 aa9.51□□□□□ -0.89
MARK3-224ENST00000561164 BMP6P22004 513 aa9.51□□□□□ -0.89
MARK3-224ENST00000561164 LRRC14Q15048 493 aa9.51□□□□□ -0.89
MARK3-224ENST00000561164 POU4F3Q15319 338 aa9.51□□□□□ -0.89
MARK3-224ENST00000561164 PRRT3Q5FWE3 981 aa9.51□□□□□ -0.89
MARK3-224ENST00000561164 LLGL2Q6P1M3 1020 aa9.51□□□□□ -0.89
MARK3-224ENST00000561164 AGMOQ6ZNB7 445 aa9.51□□□□□ -0.89
MARK3-224ENST00000561164 PHC3Q8NDX5 983 aa9.51□□□□□ -0.89
MARK3-224ENST00000561164 STK35Q8TDR2 534 aa9.51□□□□□ -0.89
MARK3-224ENST00000561164 USP26Q9BXU7 913 aa9.51□□□□□ -0.89
MARK3-224ENST00000561164 NRSN2Q9GZP1 204 aa9.51□□□□□ -0.89
MARK3-224ENST00000561164 CYP8B1Q9UNU6 501 aa9.51□□□□□ -0.89
MARK3-224ENST00000561164 TLR6Q9Y2C9 796 aa9.51□□□□□ -0.89
MARK3-224ENST00000561164 FAM229AH3BQW9 127 aa9.5□□□□□ -0.89
MARK3-224ENST00000561164 GSTP1P09211 210 aaKnown RBP9.5□□□□□ -0.89
MARK3-224ENST00000561164 MAOBP27338 520 aa9.5□□□□□ -0.89
MARK3-224ENST00000561164 RACK1P63244 317 aaKnown RBP9.5□□□□□ -0.89
MARK3-224ENST00000561164 FOXD4L6Q3SYB3 417 aaPredicted RBP9.5□□□□□ -0.89
MARK3-224ENST00000561164 RASIP1Q5U651 963 aa9.5□□□□□ -0.89
MARK3-224ENST00000561164 FOXD4L3Q6VB84 417 aaPredicted RBP9.5□□□□□ -0.89
MARK3-224ENST00000561164 RHOVQ96L33 236 aa9.5□□□□□ -0.89
MARK3-224ENST00000561164 DDX3YO15523 660 aaKnown RBP9.49□□□□□ -0.89
MARK3-224ENST00000561164 PDZD3Q86UT5 571 aa9.49□□□□□ -0.89
MARK3-224ENST00000561164 SCARF2Q96GP6 870 aaPredicted RBP9.49□□□□□ -0.89
MARK3-224ENST00000561164 DLL1O00548 723 aa9.48□□□□□ -0.89
MARK3-224ENST00000561164 ADAM11O75078 769 aa9.48□□□□□ -0.89
MARK3-224ENST00000561164 ELNP15502 786 aa9.48□□□□□ -0.89
MARK3-224ENST00000561164 TFE3P19532 575 aaPredicted RBP9.48□□□□□ -0.89
MARK3-224ENST00000561164 ZC3H6P61129 1189 aaKnown RBP9.48□□□□□ -0.89
MARK3-224ENST00000561164 LMNB2Q03252 620 aa9.48□□□□□ -0.89
MARK3-224ENST00000561164 ZNF252P-AS1Q0IIN9 211 aa9.48□□□□□ -0.89
MARK3-224ENST00000561164 MAP1SQ66K74 1059 aaPredicted RBP9.48□□□□□ -0.89
MARK3-224ENST00000561164 GRIN3AQ8TCU5 1115 aa9.48□□□□□ -0.89
MARK3-224ENST00000561164 KCNB2Q92953 911 aa9.48□□□□□ -0.89
MARK3-224ENST00000561164 ZC3H12CQ9C0D7 883 aaKnown RBP9.48□□□□□ -0.89
MARK3-224ENST00000561164 KCNK4Q9NYG8 393 aa9.48□□□□□ -0.89
MARK3-224ENST00000561164 ECEL1O95672 775 aa9.47□□□□□ -0.89
MARK3-224ENST00000561164 PF4P02776 101 aa9.47□□□□□ -0.89
MARK3-224ENST00000561164 EIF4A3P38919 411 aaKnown RBP9.47□□□□□ -0.89
MARK3-224ENST00000561164 HNRNPUQ00839 825 aaKnown RBP eCLIP9.47□□□□□ -0.89
MARK3-224ENST00000561164 CAMK2GQ13555 558 aaPredicted RBP9.47□□□□□ -0.89
MARK3-224ENST00000561164 SNAP47Q5SQN1 464 aa9.47□□□□□ -0.89
MARK3-224ENST00000561164 MIR1-1HGQ9H1L0 117 aa9.47□□□□□ -0.89
MARK3-224ENST00000561164 ACBD3Q9H3P7 528 aa9.47□□□□□ -0.89
MARK3-224ENST00000561164 LOC100289279A0A1B0GTE1 492 aa9.46□□□□□ -0.9
MARK3-224ENST00000561164 FAM160A1Q05DH4 1040 aa9.46□□□□□ -0.9
MARK3-224ENST00000561164 PDE3AQ14432 1141 aa9.46□□□□□ -0.9
MARK3-224ENST00000561164 DUOXA2Q1HG44 320 aa9.46□□□□□ -0.9
MARK3-224ENST00000561164 HP1BP3Q5SSJ5 553 aaPredicted RBP9.46□□□□□ -0.9
MARK3-224ENST00000561164 KIAA0825Q8IV33 1275 aa9.46□□□□□ -0.9
MARK3-224ENST00000561164 UBASH3BQ8TF42 649 aa9.46□□□□□ -0.9
MARK3-224ENST00000561164 SPON2Q9BUD6 331 aa9.46□□□□□ -0.9
MARK3-224ENST00000561164 ADAMTS1Q9UHI8 967 aa9.46□□□□□ -0.9
MARK3-224ENST00000561164 PCDHB5Q9Y5E4 795 aa9.46□□□□□ -0.9
MARK3-224ENST00000561164 FAM181BA6NEQ2 426 aa9.45□□□□□ -0.9
MARK3-224ENST00000561164 TRIM37O94972 964 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms