RNA–Protein interactions for RNA: ENST00000561059.5

PSME1-208, Transcript of proteasome activator subunit 1, humanhuman

TSL 2

Gene PSME1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME1-208ENST00000561059 SERPINA10Q9UK55 444 aa16.84■□□□□ 0.29
PSME1-208ENST00000561059 IREB2P48200 963 aaKnown RBP16.83■□□□□ 0.28
PSME1-208ENST00000561059 SLFN5Q08AF3 891 aa16.83■□□□□ 0.28
PSME1-208ENST00000561059 TEPSINQ96N21 525 aa16.83■□□□□ 0.28
PSME1-208ENST00000561059 PTPRCP08575 1304 aa16.82■□□□□ 0.28
PSME1-208ENST00000561059 PDE8BO95263 885 aa16.82■□□□□ 0.28
PSME1-208ENST00000561059 ZBTB48P10074 688 aaPredicted RBP16.82■□□□□ 0.28
PSME1-208ENST00000561059 SMC4Q9NTJ3 1288 aa16.82■□□□□ 0.28
PSME1-208ENST00000561059 ECM29Q5VYK3 1845 aa16.82■□□□□ 0.28
PSME1-208ENST00000561059 TNFAIP1Q13829 316 aa16.81■□□□□ 0.28
PSME1-208ENST00000561059 PKN2Q16513 984 aaKnown RBP16.81■□□□□ 0.28
PSME1-208ENST00000561059 CAVIN4Q5BKX8 364 aa16.81■□□□□ 0.28
PSME1-208ENST00000561059 ANKRD13AQ8IZ07 590 aa16.81■□□□□ 0.28
PSME1-208ENST00000561059 OPTNQ96CV9 577 aa16.81■□□□□ 0.28
PSME1-208ENST00000561059 PTPN18Q99952 460 aa16.81■□□□□ 0.28
PSME1-208ENST00000561059 CENPFP49454 3210 aa16.81■□□□□ 0.28
PSME1-208ENST00000561059 ALDH1A1P00352 501 aa16.8■□□□□ 0.28
PSME1-208ENST00000561059 CRHR2Q13324 411 aa16.8■□□□□ 0.28
PSME1-208ENST00000561059 FBXO46Q6PJ61 603 aaPredicted RBP16.8■□□□□ 0.28
PSME1-208ENST00000561059 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.8■□□□□ 0.28
PSME1-208ENST00000561059 CFHR5Q9BXR6 569 aa16.8■□□□□ 0.28
PSME1-208ENST00000561059 SIL1Q9H173 461 aa16.8■□□□□ 0.28
PSME1-208ENST00000561059 RFX5P48382 616 aaPredicted RBP16.79■□□□□ 0.28
PSME1-208ENST00000561059 NOM1Q5C9Z4 860 aaKnown RBP16.79■□□□□ 0.28
PSME1-208ENST00000561059 CD99L2Q8TCZ2 262 aa16.79■□□□□ 0.28
PSME1-208ENST00000561059 TRIM17Q9Y577 477 aa16.79■□□□□ 0.28
PSME1-208ENST00000561059 FGFR2P21802 821 aa16.78■□□□□ 0.28
PSME1-208ENST00000561059 INHBEP58166 350 aa16.78■□□□□ 0.28
PSME1-208ENST00000561059 CAP1Q01518 475 aa16.78■□□□□ 0.28
PSME1-208ENST00000561059 VGLL4Q14135 290 aa16.78■□□□□ 0.28
PSME1-208ENST00000561059 PUM3Q15397 648 aaKnown RBP16.78■□□□□ 0.28
PSME1-208ENST00000561059 TEKT1Q969V4 418 aa16.78■□□□□ 0.28
PSME1-208ENST00000561059 PDE4DIPQ5VU43 2346 aa16.78■□□□□ 0.28
PSME1-208ENST00000561059 OTOFQ9HC10 1997 aa16.77■□□□□ 0.28
PSME1-208ENST00000561059 ARAP2Q8WZ64 1704 aa16.77■□□□□ 0.28
PSME1-208ENST00000561059 EYA2O00167 538 aa16.77■□□□□ 0.28
PSME1-208ENST00000561059 IFIT1P09914 478 aaKnown RBP16.77■□□□□ 0.28
PSME1-208ENST00000561059 TNNI2P48788 182 aa16.77■□□□□ 0.28
PSME1-208ENST00000561059 MAP3K9P80192 1104 aa16.77■□□□□ 0.28
PSME1-208ENST00000561059 APOBEC3HQ6NTF7 200 aaKnown RBP16.77■□□□□ 0.28
PSME1-208ENST00000561059 OTOP1Q7RTM1 612 aa16.77■□□□□ 0.28
PSME1-208ENST00000561059 TBC1D22AQ8WUA7 517 aa16.77■□□□□ 0.28
PSME1-208ENST00000561059 OTUD5Q96G74 571 aa16.77■□□□□ 0.28
PSME1-208ENST00000561059 NOB1Q9ULX3 412 aaKnown RBP16.77■□□□□ 0.28
PSME1-208ENST00000561059 ATG9AQ7Z3C6 839 aa16.76■□□□□ 0.27
PSME1-208ENST00000561059 BRI3BPQ8WY22 251 aa16.76■□□□□ 0.27
PSME1-208ENST00000561059 PA2G4Q9UQ80 394 aaKnown RBP16.76■□□□□ 0.27
PSME1-208ENST00000561059 CCL15-CCL14A0A0B4J2E2 113 aa16.75■□□□□ 0.27
PSME1-208ENST00000561059 UNCXA6NJT0 531 aa16.75■□□□□ 0.27
PSME1-208ENST00000561059 UBTFL1P0CB47 393 aaPredicted RBP16.75■□□□□ 0.27
PSME1-208ENST00000561059 SLC5A1P13866 664 aa16.75■□□□□ 0.27
PSME1-208ENST00000561059 CCL15Q16663 113 aa16.75■□□□□ 0.27
PSME1-208ENST00000561059 ALDH1L2Q3SY69 923 aa16.75■□□□□ 0.27
PSME1-208ENST00000561059 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.75■□□□□ 0.273e-7■■■■□ 25.2
PSME1-208ENST00000561059 ZKSCAN4Q969J2 545 aaPredicted RBP16.75■□□□□ 0.27
PSME1-208ENST00000561059 MS4A4AQ96JQ5 239 aa16.75■□□□□ 0.27
PSME1-208ENST00000561059 ZDHHC15Q96MV8 337 aa16.75■□□□□ 0.27
PSME1-208ENST00000561059 MKI67P46013 3256 aaKnown RBP16.74■□□□□ 0.27
PSME1-208ENST00000561059 ECM2O94769 699 aaPredicted RBP16.74■□□□□ 0.27
PSME1-208ENST00000561059 SLC34A2O95436 690 aa16.74■□□□□ 0.27
PSME1-208ENST00000561059 HDLBPQ00341 1268 aaKnown RBP16.74■□□□□ 0.27
PSME1-208ENST00000561059 DIXDC1Q155Q3 683 aa16.74■□□□□ 0.27
PSME1-208ENST00000561059 OTUD7BQ6GQQ9 843 aa16.74■□□□□ 0.27
PSME1-208ENST00000561059 MIGA2Q7L4E1 593 aa16.74■□□□□ 0.27
PSME1-208ENST00000561059 LPIN2Q92539 896 aa16.74■□□□□ 0.27
PSME1-208ENST00000561059 WRNIP1Q96S55 665 aa16.74■□□□□ 0.27
PSME1-208ENST00000561059 CSADQ9Y600 493 aa16.74■□□□□ 0.27
PSME1-208ENST00000561059 LRRFIP2Q9Y608 721 aaKnown RBP16.74■□□□□ 0.27
PSME1-208ENST00000561059 TESPA1A2RU30 521 aaPredicted RBP16.73■□□□□ 0.27
PSME1-208ENST00000561059 PRDX5P30044 214 aa16.73■□□□□ 0.27
PSME1-208ENST00000561059 TCP10Q12799 353 aa16.73■□□□□ 0.27
PSME1-208ENST00000561059 ATP2B3Q16720 1220 aa16.73■□□□□ 0.27
PSME1-208ENST00000561059 FAM43AQ8N2R8 423 aa16.73■□□□□ 0.27
PSME1-208ENST00000561059 TMOD2Q9NZR1 351 aa16.73■□□□□ 0.27
PSME1-208ENST00000561059 SNCAIPQ9Y6H5 919 aa16.73■□□□□ 0.27
PSME1-208ENST00000561059 BRCA2P51587 3418 aa16.73■□□□□ 0.27
PSME1-208ENST00000561059 ADORA1P30542 326 aa16.72■□□□□ 0.27
PSME1-208ENST00000561059 SP3Q02447 781 aa16.72■□□□□ 0.27
PSME1-208ENST00000561059 TAF1CQ15572 869 aaPredicted RBP16.72■□□□□ 0.27
PSME1-208ENST00000561059 TRMT2AQ8IZ69 625 aaKnown RBP16.72■□□□□ 0.27
PSME1-208ENST00000561059 ERO1AQ96HE7 468 aa16.72■□□□□ 0.27
PSME1-208ENST00000561059 MEIS3Q99687 375 aa16.72■□□□□ 0.27
PSME1-208ENST00000561059 EFCC1Q9HA90 598 aa16.72■□□□□ 0.27
PSME1-208ENST00000561059 KIF16BQ96L93 1317 aa16.71■□□□□ 0.27
PSME1-208ENST00000561059 POTEFA5A3E0 1075 aa16.71■□□□□ 0.27
PSME1-208ENST00000561059 PHKA1P46020 1223 aa16.71■□□□□ 0.27
PSME1-208ENST00000561059 GTF2A2P52657 109 aa16.71■□□□□ 0.27
PSME1-208ENST00000561059 NFIAQ12857 509 aa16.71■□□□□ 0.27
PSME1-208ENST00000561059 WDR66Q8TBY9 1149 aa16.71■□□□□ 0.27
PSME1-208ENST00000561059 CEP126Q9P2H0 1117 aa16.71■□□□□ 0.27
PSME1-208ENST00000561059 PTPN22Q9Y2R2 807 aa16.71■□□□□ 0.27
PSME1-208ENST00000561059 DAGLAQ9Y4D2 1042 aa16.71■□□□□ 0.27
PSME1-208ENST00000561059 MAST3O60307 1309 aa16.7■□□□□ 0.26
PSME1-208ENST00000561059 SPDYE5A6NIY4 337 aa16.7■□□□□ 0.26
PSME1-208ENST00000561059 INPP5BP32019 993 aa16.7■□□□□ 0.26
PSME1-208ENST00000561059 CDC42EP5Q6NZY7 148 aa16.7■□□□□ 0.26
PSME1-208ENST00000561059 FAM83AQ86UY5 434 aa16.7■□□□□ 0.26
PSME1-208ENST00000561059 IRF6O14896 467 aa16.69■□□□□ 0.26
PSME1-208ENST00000561059 MYCP01106 439 aaPredicted RBP16.69■□□□□ 0.26
PSME1-208ENST00000561059 HHIPL2Q6UWX4 724 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms