RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 BEND3Q5T5X7 828 aa23.55■■□□□ 1.36
TPM1-226ENST00000560959 JAG2Q9Y219 1238 aa23.55■■□□□ 1.36
TPM1-226ENST00000560959 CHMP3Q9Y3E7 222 aa23.55■■□□□ 1.36
TPM1-226ENST00000560959 CSADQ9Y600 493 aa23.55■■□□□ 1.36
TPM1-226ENST00000560959 HIBADHP31937 336 aaKnown RBP23.54■■□□□ 1.36
TPM1-226ENST00000560959 VGLL4Q14135 290 aa23.54■■□□□ 1.36
TPM1-226ENST00000560959 SLC4A8Q2Y0W8 1093 aa23.54■■□□□ 1.36
TPM1-226ENST00000560959 CNNM1Q9NRU3 951 aa23.54■■□□□ 1.36
TPM1-226ENST00000560959 TLR2O60603 784 aa23.53■■□□□ 1.36
TPM1-226ENST00000560959 VAMP4O75379 141 aa23.53■■□□□ 1.36
TPM1-226ENST00000560959 HDLBPQ00341 1268 aaKnown RBP23.53■■□□□ 1.36
TPM1-226ENST00000560959 TAF7LQ5H9L4 462 aa23.53■■□□□ 1.36
TPM1-226ENST00000560959 FAM43AQ8N2R8 423 aa23.53■■□□□ 1.36
TPM1-226ENST00000560959 COLQQ9Y215 455 aaPredicted RBP23.53■■□□□ 1.36
TPM1-226ENST00000560959 PLIN1O60240 522 aa23.52■■□□□ 1.36
TPM1-226ENST00000560959 CRKP46108 304 aa23.52■■□□□ 1.36
TPM1-226ENST00000560959 PRMT2P55345 433 aa23.52■■□□□ 1.36
TPM1-226ENST00000560959 CNKSR2Q8WXI2 1034 aa23.52■■□□□ 1.36
TPM1-226ENST00000560959 FAM84BQ96KN1 310 aaPredicted RBP23.52■■□□□ 1.36
TPM1-226ENST00000560959 TMEM39BQ9GZU3 492 aa23.52■■□□□ 1.36
TPM1-226ENST00000560959 SPDYE5A6NIY4 337 aa23.51■■□□□ 1.35
TPM1-226ENST00000560959 TCP10L2B9ZVM9 353 aa23.51■■□□□ 1.35
TPM1-226ENST00000560959 GRM8O00222 908 aa23.51■■□□□ 1.35
TPM1-226ENST00000560959 CETPP11597 493 aa23.51■■□□□ 1.35
TPM1-226ENST00000560959 KIF22Q14807 665 aa23.51■■□□□ 1.35
TPM1-226ENST00000560959 EPHA10Q5JZY3 1008 aa23.51■■□□□ 1.35
TPM1-226ENST00000560959 ZNF594Q96JF6 807 aaPredicted RBP23.51■■□□□ 1.35
TPM1-226ENST00000560959 MRIQ9BWK5 157 aa23.51■■□□□ 1.35
TPM1-226ENST00000560959 ERO1BQ86YB8 467 aa23.5■■□□□ 1.35
TPM1-226ENST00000560959 CDAN1Q8IWY9 1227 aa23.5■■□□□ 1.35
TPM1-226ENST00000560959 OTUD5Q96G74 571 aa23.5■■□□□ 1.35
TPM1-226ENST00000560959 CACNA1FO60840 1977 aa23.49■■□□□ 1.35
TPM1-226ENST00000560959 GYG1P46976 350 aa23.49■■□□□ 1.35
TPM1-226ENST00000560959 LACTBP83111 547 aaPredicted RBP23.49■■□□□ 1.35
TPM1-226ENST00000560959 HOOK2Q96ED9 719 aa23.49■■□□□ 1.35
TPM1-226ENST00000560959 FKBP1CQ5VVH2 108 aa23.48■■□□□ 1.35
TPM1-226ENST00000560959 TBC1D22AQ8WUA7 517 aa23.48■■□□□ 1.35
TPM1-226ENST00000560959 FANCIQ9NVI1 1328 aa23.48■■□□□ 1.35
TPM1-226ENST00000560959 A0A1B0GUL6 1792 aa23.47■■□□□ 1.35
TPM1-226ENST00000560959 OTOFQ9HC10 1997 aa23.47■■□□□ 1.35
TPM1-226ENST00000560959 F6X3S4 739 aa23.47■■□□□ 1.35
TPM1-226ENST00000560959 SNAPC2Q13487 334 aa23.47■■□□□ 1.35
TPM1-226ENST00000560959 FBXO33Q7Z6M2 555 aa23.47■■□□□ 1.35
TPM1-226ENST00000560959 FAM83AQ86UY5 434 aa23.47■■□□□ 1.35
TPM1-226ENST00000560959 BTBD19C9JJ37 291 aa23.46■■□□□ 1.35
TPM1-226ENST00000560959 ALDH1L1O75891 902 aa23.46■■□□□ 1.35
TPM1-226ENST00000560959 WDR63Q8IWG1 891 aa23.46■■□□□ 1.35
TPM1-226ENST00000560959 C9orf78Q9NZ63 289 aaPredicted RBP23.46■■□□□ 1.35
TPM1-226ENST00000560959 RIPOR2Q9Y4F9 1068 aa23.46■■□□□ 1.35
TPM1-226ENST00000560959 SNCAIPQ9Y6H5 919 aa23.46■■□□□ 1.35
TPM1-226ENST00000560959 MROH5Q6ZUA9 1318 aa23.45■■□□□ 1.34
TPM1-226ENST00000560959 H0YGN5 161 aa23.45■■□□□ 1.34
TPM1-226ENST00000560959 PPIL2Q13356 520 aa23.45■■□□□ 1.34
TPM1-226ENST00000560959 TEKT1Q969V4 418 aa23.45■■□□□ 1.34
TPM1-226ENST00000560959 IRF6O14896 467 aa23.44■■□□□ 1.34
TPM1-226ENST00000560959 C17orf99Q6UX52 265 aa23.44■■□□□ 1.34
TPM1-226ENST00000560959 VPS37DQ86XT2 251 aa23.44■■□□□ 1.34
TPM1-226ENST00000560959 SH3TC2Q8TF17 1288 aa23.44■■□□□ 1.34
TPM1-226ENST00000560959 ZDHHC15Q96MV8 337 aa23.44■■□□□ 1.34
TPM1-226ENST00000560959 ARHGAP39Q9C0H5 1083 aa23.44■■□□□ 1.34
TPM1-226ENST00000560959 SUGT1Q9Y2Z0 365 aa23.44■■□□□ 1.34
TPM1-226ENST00000560959 PPATQ06203 517 aa23.43■■□□□ 1.34
TPM1-226ENST00000560959 NKX2-3Q8TAU0 364 aa23.43■■□□□ 1.34
TPM1-226ENST00000560959 WRNIP1Q96S55 665 aa23.43■■□□□ 1.34
TPM1-226ENST00000560959 TMOD2Q9NZR1 351 aa23.43■■□□□ 1.34
TPM1-226ENST00000560959 HOXD10P28358 340 aa23.42■■□□□ 1.34
TPM1-226ENST00000560959 EXOSC9Q06265 439 aaKnown RBP23.42■■□□□ 1.34
TPM1-226ENST00000560959 GRIK5Q16478 980 aa23.42■■□□□ 1.34
TPM1-226ENST00000560959 CAVIN4Q5BKX8 364 aa23.42■■□□□ 1.34
TPM1-226ENST00000560959 DCAF15Q66K64 600 aa23.42■■□□□ 1.34
TPM1-226ENST00000560959 PUS3Q9BZE2 481 aaKnown RBP23.42■■□□□ 1.34
TPM1-226ENST00000560959 ZKSCAN4Q969J2 545 aaPredicted RBP23.41■■□□□ 1.34
TPM1-226ENST00000560959 ARAP2Q8WZ64 1704 aa23.41■■□□□ 1.34
TPM1-226ENST00000560959 MAST3O60307 1309 aa23.4■■□□□ 1.34
TPM1-226ENST00000560959 APOBEC3HQ6NTF7 200 aaKnown RBP23.4■■□□□ 1.34
TPM1-226ENST00000560959 ANKRD23Q86SG2 305 aa23.4■■□□□ 1.34
TPM1-226ENST00000560959 SRCIN1Q9C0H9 1055 aa23.4■■□□□ 1.34
TPM1-226ENST00000560959 SRRDQ9UH36 339 aa23.4■■□□□ 1.34
TPM1-226ENST00000560959 RPAP1Q9BWH6 1393 aaPredicted RBP23.4■■□□□ 1.34
TPM1-226ENST00000560959 FRAT2O75474 233 aaPredicted RBP23.39■■□□□ 1.33
TPM1-226ENST00000560959 MYCP01106 439 aaPredicted RBP23.39■■□□□ 1.33
TPM1-226ENST00000560959 HHIPL2Q6UWX4 724 aa23.39■■□□□ 1.33
TPM1-226ENST00000560959 KAZALD1Q96I82 304 aa23.39■■□□□ 1.33
TPM1-226ENST00000560959 UTYO14607 1347 aa23.38■■□□□ 1.33
TPM1-226ENST00000560959 SZT2Q5T011 3432 aa23.38■■□□□ 1.33
TPM1-226ENST00000560959 CACNB3P54284 484 aa23.38■■□□□ 1.33
TPM1-226ENST00000560959 CHAF1AQ13111 956 aaPredicted RBP23.38■■□□□ 1.33
TPM1-226ENST00000560959 SUCLG2Q96I99 432 aa23.38■■□□□ 1.33
TPM1-226ENST00000560959 ZNF341Q9BYN7 854 aa23.38■■□□□ 1.33
TPM1-226ENST00000560959 PDE8BO95263 885 aa23.37■■□□□ 1.33
TPM1-226ENST00000560959 PSMC4P43686 418 aa23.37■■□□□ 1.33
TPM1-226ENST00000560959 GJA8P48165 433 aa23.37■■□□□ 1.33
TPM1-226ENST00000560959 RABL6Q3YEC7 729 aaPredicted RBP23.37■■□□□ 1.33
TPM1-226ENST00000560959 CCDC184Q52MB2 194 aa23.37■■□□□ 1.33
TPM1-226ENST00000560959 SHISA4Q96DD7 197 aa23.37■■□□□ 1.33
TPM1-226ENST00000560959 ZNF112Q9UJU3 913 aa23.37■■□□□ 1.33
TPM1-226ENST00000560959 KCNH4Q9UQ05 1017 aa23.37■■□□□ 1.33
TPM1-226ENST00000560959 KIF16BQ96L93 1317 aa23.36■■□□□ 1.33
TPM1-226ENST00000560959 CEP290O15078 2479 aa23.36■■□□□ 1.33
TPM1-226ENST00000560959 GJB1P08034 283 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms