RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 DEFB118Q96PH6 123 aa12.37□□□□□ -0.43
HERC1-210ENST00000560897 ALPK3Q96L96 1907 aa12.37□□□□□ -0.43
HERC1-210ENST00000560897 MAGEA10P43363 369 aaPredicted RBP12.36□□□□□ -0.43
HERC1-210ENST00000560897 TNNI2P48788 182 aa12.36□□□□□ -0.43
HERC1-210ENST00000560897 LMOD3Q0VAK6 560 aa12.36□□□□□ -0.43
HERC1-210ENST00000560897 ERO1BQ86YB8 467 aa12.36□□□□□ -0.43
HERC1-210ENST00000560897 CCDC191Q8NCU4 936 aa12.36□□□□□ -0.43
HERC1-210ENST00000560897 PAWRQ96IZ0 340 aaKnown RBP12.36□□□□□ -0.43
HERC1-210ENST00000560897 PRMT6Q96LA8 375 aaPredicted RBP12.36□□□□□ -0.43
HERC1-210ENST00000560897 MYD88Q99836 296 aa12.36□□□□□ -0.43
HERC1-210ENST00000560897 ANKRD2Q9GZV1 360 aa12.36□□□□□ -0.43
HERC1-210ENST00000560897 CWC25Q9NXE8 425 aaPredicted RBP12.36□□□□□ -0.43
HERC1-210ENST00000560897 PCDHAC2Q9Y5I4 1007 aa12.36□□□□□ -0.43
HERC1-210ENST00000560897 CTGFP29279 349 aa12.35□□□□□ -0.43
HERC1-210ENST00000560897 CTSWP56202 376 aa12.35□□□□□ -0.43
HERC1-210ENST00000560897 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.35□□□□□ -0.43
HERC1-210ENST00000560897 CD209Q9NNX6 404 aa12.35□□□□□ -0.43
HERC1-210ENST00000560897 MYH3P11055 1940 aa12.35□□□□□ -0.43
HERC1-210ENST00000560897 FAM205AQ6ZU69 1335 aa12.35□□□□□ -0.43
HERC1-210ENST00000560897 ADGRA2Q96PE1 1338 aa12.35□□□□□ -0.43
HERC1-210ENST00000560897 CLSPNQ9HAW4 1339 aa12.35□□□□□ -0.43
HERC1-210ENST00000560897 ADCY3O60266 1144 aa12.34□□□□□ -0.43
HERC1-210ENST00000560897 INHAP05111 366 aa12.34□□□□□ -0.43
HERC1-210ENST00000560897 SYN1P17600 705 aa12.34□□□□□ -0.43
HERC1-210ENST00000560897 RIPK4P57078 832 aa12.34□□□□□ -0.43
HERC1-210ENST00000560897 JARID2Q92833 1246 aaPredicted RBP12.34□□□□□ -0.43
HERC1-210ENST00000560897 FAM122AQ96E09 287 aa12.34□□□□□ -0.43
HERC1-210ENST00000560897 FAM161BQ96MY7 647 aa12.34□□□□□ -0.43
HERC1-210ENST00000560897 PLEKHF1Q96S99 279 aa12.34□□□□□ -0.43
HERC1-210ENST00000560897 IRF6O14896 467 aa12.33□□□□□ -0.44
HERC1-210ENST00000560897 HOXB7P09629 217 aa12.33□□□□□ -0.44
HERC1-210ENST00000560897 KLRK1P26718 216 aa12.33□□□□□ -0.44
HERC1-210ENST00000560897 PPIL2Q13356 520 aa12.33□□□□□ -0.44
HERC1-210ENST00000560897 SPDYE2Q495Y8 402 aa12.33□□□□□ -0.44
HERC1-210ENST00000560897 ZNF697Q5TEC3 545 aa12.33□□□□□ -0.44
HERC1-210ENST00000560897 FAM109BQ6ICB4 259 aaPredicted RBP12.33□□□□□ -0.44
HERC1-210ENST00000560897 CERS5Q8N5B7 392 aa12.33□□□□□ -0.44
HERC1-210ENST00000560897 GUCD1Q96NT3 240 aa12.33□□□□□ -0.44
HERC1-210ENST00000560897 WRNIP1Q96S55 665 aa12.33□□□□□ -0.44
HERC1-210ENST00000560897 PARK7Q99497 189 aaKnown RBP12.33□□□□□ -0.44
HERC1-210ENST00000560897 MPHOSPH8Q99549 860 aa12.33□□□□□ -0.44
HERC1-210ENST00000560897 GREM2Q9H772 168 aa12.33□□□□□ -0.44
HERC1-210ENST00000560897 ZNF70Q9UC06 446 aaPredicted RBP12.33□□□□□ -0.44
HERC1-210ENST00000560897 TAOK2Q9UL54 1235 aa12.33□□□□□ -0.44
HERC1-210ENST00000560897 LAS1LQ9Y4W2 734 aaKnown RBP12.33□□□□□ -0.44
HERC1-210ENST00000560897 MGAMO43451 1857 aa12.33□□□□□ -0.44
HERC1-210ENST00000560897 TCP10L2B9ZVM9 353 aa12.32□□□□□ -0.44
HERC1-210ENST00000560897 PDHXO00330 501 aa12.32□□□□□ -0.44
HERC1-210ENST00000560897 PLA2G5P39877 138 aa12.32□□□□□ -0.44
HERC1-210ENST00000560897 FKBP1AP62942 108 aaKnown RBP12.32□□□□□ -0.44
HERC1-210ENST00000560897 KRT24Q2M2I5 525 aa12.32□□□□□ -0.44
HERC1-210ENST00000560897 ZNF804AQ7Z570 1209 aa12.32□□□□□ -0.44
HERC1-210ENST00000560897 ANKRD23Q86SG2 305 aa12.32□□□□□ -0.44
HERC1-210ENST00000560897 ANKLE1Q8NAG6 615 aa12.32□□□□□ -0.44
HERC1-210ENST00000560897 MAFAQ8NHW3 353 aaPredicted RBP12.32□□□□□ -0.44
HERC1-210ENST00000560897 HOOK2Q96ED9 719 aa12.32□□□□□ -0.44
HERC1-210ENST00000560897 SNCAIPQ9Y6H5 919 aa12.32□□□□□ -0.44
HERC1-210ENST00000560897 ARAP2Q8WZ64 1704 aa12.31□□□□□ -0.44
HERC1-210ENST00000560897 SPTBN5Q9NRC6 3674 aaKnown RBP12.31□□□□□ -0.44
HERC1-210ENST00000560897 ELNP15502 786 aa12.31□□□□□ -0.44
HERC1-210ENST00000560897 PXYLP1Q8TE99 480 aa12.31□□□□□ -0.44
HERC1-210ENST00000560897 DIS3LQ8TF46 1054 aaKnown RBP12.31□□□□□ -0.44
HERC1-210ENST00000560897 TMEM39BQ9GZU3 492 aa12.31□□□□□ -0.44
HERC1-210ENST00000560897 NBPF3Q9H094 633 aa12.31□□□□□ -0.44
HERC1-210ENST00000560897 TDRD3Q9H7E2 651 aaKnown RBP12.31□□□□□ -0.44
HERC1-210ENST00000560897 PAK6Q9NQU5 681 aaPredicted RBP12.31□□□□□ -0.44
HERC1-210ENST00000560897 AOX1Q06278 1338 aa12.31□□□□□ -0.44
HERC1-210ENST00000560897 TTC28Q96AY4 2481 aa12.3□□□□□ -0.44
HERC1-210ENST00000560897 FLT3LGP49771 235 aa12.3□□□□□ -0.44
HERC1-210ENST00000560897 PPATQ06203 517 aa12.3□□□□□ -0.44
HERC1-210ENST00000560897 CDAN1Q8IWY9 1227 aa12.3□□□□□ -0.44
HERC1-210ENST00000560897 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.3□□□□□ -0.44
HERC1-210ENST00000560897 TTLL11Q8NHH1 800 aa12.3□□□□□ -0.44
HERC1-210ENST00000560897 TEPSINQ96N21 525 aa12.3□□□□□ -0.44
HERC1-210ENST00000560897 CRISPLD2Q9H0B8 497 aa12.3□□□□□ -0.44
HERC1-210ENST00000560897 GABRQQ9UN88 632 aa12.3□□□□□ -0.44
HERC1-210ENST00000560897 JAG2Q9Y219 1238 aa12.3□□□□□ -0.44
HERC1-210ENST00000560897 TNPO2O14787 897 aaKnown RBP12.29□□□□□ -0.44
HERC1-210ENST00000560897 DDX58O95786 925 aaKnown RBP12.29□□□□□ -0.44
HERC1-210ENST00000560897 DCAF15Q66K64 600 aa12.29□□□□□ -0.44
HERC1-210ENST00000560897 ZKSCAN4Q969J2 545 aaPredicted RBP12.29□□□□□ -0.44
HERC1-210ENST00000560897 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.29□□□□□ -0.44
HERC1-210ENST00000560897 C11orf49Q9H6J7 331 aa12.29□□□□□ -0.44
HERC1-210ENST00000560897 SERPINA10Q9UK55 444 aa12.29□□□□□ -0.44
HERC1-210ENST00000560897 TTF2Q9UNY4 1162 aaKnown RBP12.29□□□□□ -0.44
HERC1-210ENST00000560897 TMEM265A0A087WTH1 108 aa12.28□□□□□ -0.44
HERC1-210ENST00000560897 POTEB2H3BUK9 544 aa12.28□□□□□ -0.44
HERC1-210ENST00000560897 TNFRSF10AO00220 468 aa12.28□□□□□ -0.44
HERC1-210ENST00000560897 CHRNDQ07001 517 aa12.28□□□□□ -0.44
HERC1-210ENST00000560897 TMOD2Q9NZR1 351 aa12.28□□□□□ -0.44
HERC1-210ENST00000560897 CHL1O00533 1208 aa12.27□□□□□ -0.45
HERC1-210ENST00000560897 BCRP11274 1271 aa12.27□□□□□ -0.45
HERC1-210ENST00000560897 IL1R1P14778 569 aa12.27□□□□□ -0.45
HERC1-210ENST00000560897 IRF5Q13568 498 aa12.27□□□□□ -0.45
HERC1-210ENST00000560897 DZIP1LQ8IYY4 767 aaKnown RBP12.27□□□□□ -0.45
HERC1-210ENST00000560897 COA7Q96BR5 231 aa12.27□□□□□ -0.45
HERC1-210ENST00000560897 METTL22Q9BUU2 404 aaPredicted RBP12.27□□□□□ -0.45
HERC1-210ENST00000560897 DDX60LQ5H9U9 1706 aaKnown RBP12.27□□□□□ -0.45
HERC1-210ENST00000560897 ITGA6P23229 1130 aa12.26□□□□□ -0.45
HERC1-210ENST00000560897 MDM2Q00987 491 aaPredicted RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms