RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 RASSF10A6NK89 507 aa18.8■□□□□ 0.6
SNRPA1-213ENST00000560856 PRDX5P30044 214 aa18.8■□□□□ 0.6
SNRPA1-213ENST00000560856 PI16Q6UXB8 463 aa18.8■□□□□ 0.6
SNRPA1-213ENST00000560856 TLR7Q9NYK1 1049 aaKnown RBP18.8■□□□□ 0.6
SNRPA1-213ENST00000560856 PCDHB15Q9Y5E8 787 aa18.8■□□□□ 0.6
SNRPA1-213ENST00000560856 CNTNAP1P78357 1384 aa18.8■□□□□ 0.6
SNRPA1-213ENST00000560856 MCAMP43121 646 aa18.79■□□□□ 0.6
SNRPA1-213ENST00000560856 RBM5P52756 815 aaKnown RBP eCLIP18.79■□□□□ 0.6
SNRPA1-213ENST00000560856 GORABQ5T7V8 394 aa18.79■□□□□ 0.6
SNRPA1-213ENST00000560856 APOBEC3HQ6NTF7 200 aaKnown RBP18.79■□□□□ 0.6
SNRPA1-213ENST00000560856 HHIPL2Q6UWX4 724 aa18.79■□□□□ 0.6
SNRPA1-213ENST00000560856 CCDC8Q9H0W5 538 aaPredicted RBP18.79■□□□□ 0.6
SNRPA1-213ENST00000560856 MKRN1Q9UHC7 482 aaKnown RBP18.79■□□□□ 0.6
SNRPA1-213ENST00000560856 TLL2Q9Y6L7 1015 aa18.79■□□□□ 0.6
SNRPA1-213ENST00000560856 CLRN2A0PK11 232 aa18.78■□□□□ 0.6
SNRPA1-213ENST00000560856 SPDYE2Q495Y8 402 aa18.78■□□□□ 0.6
SNRPA1-213ENST00000560856 PRAMEF18Q5VWM3 479 aa18.78■□□□□ 0.6
SNRPA1-213ENST00000560856 SAPCD2Q86UD0 394 aa18.78■□□□□ 0.6
SNRPA1-213ENST00000560856 APOBEC3FQ8IUX4 373 aaKnown RBP18.78■□□□□ 0.6
SNRPA1-213ENST00000560856 JMYQ8N9B5 988 aa18.78■□□□□ 0.6
SNRPA1-213ENST00000560856 TEKT1Q969V4 418 aa18.78■□□□□ 0.6
SNRPA1-213ENST00000560856 KIF1BPQ96EK5 621 aa18.78■□□□□ 0.6
SNRPA1-213ENST00000560856 ZNF512BQ96KM6 892 aaPredicted RBP18.78■□□□□ 0.6
SNRPA1-213ENST00000560856 ZDHHC15Q96MV8 337 aa18.78■□□□□ 0.6
SNRPA1-213ENST00000560856 TDRD3Q9H7E2 651 aaKnown RBP18.78■□□□□ 0.6
SNRPA1-213ENST00000560856 ZNF408Q9H9D4 720 aa18.78■□□□□ 0.6
SNRPA1-213ENST00000560856 IL1RAPL2Q9NP60 686 aa18.78■□□□□ 0.6
SNRPA1-213ENST00000560856 ZNF70Q9UC06 446 aaPredicted RBP18.78■□□□□ 0.6
SNRPA1-213ENST00000560856 MAST3O60307 1309 aa18.77■□□□□ 0.6
SNRPA1-213ENST00000560856 RAB11FIP3O75154 756 aa18.77■□□□□ 0.6
SNRPA1-213ENST00000560856 LDHBP07195 334 aaKnown RBP18.77■□□□□ 0.6
SNRPA1-213ENST00000560856 UQCRFS1P1P0C7P4 283 aa18.77■□□□□ 0.6
SNRPA1-213ENST00000560856 SPATA5Q8NB90 893 aa18.77■□□□□ 0.6
SNRPA1-213ENST00000560856 DIXDC1Q155Q3 683 aa18.76■□□□□ 0.59
SNRPA1-213ENST00000560856 DEFB115Q30KQ5 88 aa18.76■□□□□ 0.59
SNRPA1-213ENST00000560856 ZNF384Q8TF68 577 aa18.76■□□□□ 0.59
SNRPA1-213ENST00000560856 DEFB129Q9H1M3 183 aa18.76■□□□□ 0.59
SNRPA1-213ENST00000560856 GBA2Q9HCG7 927 aaPredicted RBP18.76■□□□□ 0.59
SNRPA1-213ENST00000560856 ABT1Q9ULW3 272 aaKnown RBP18.76■□□□□ 0.59
SNRPA1-213ENST00000560856 DAGLAQ9Y4D2 1042 aa18.76■□□□□ 0.59
SNRPA1-213ENST00000560856 ECM29Q5VYK3 1845 aa18.76■□□□□ 0.59
SNRPA1-213ENST00000560856 AKAP11Q9UKA4 1901 aa18.76■□□□□ 0.59
SNRPA1-213ENST00000560856 MYO1BO43795 1136 aa18.75■□□□□ 0.59
SNRPA1-213ENST00000560856 VEGFBP49765 207 aa18.75■□□□□ 0.59
SNRPA1-213ENST00000560856 CCDC158Q5M9N0 1113 aa18.75■□□□□ 0.59
SNRPA1-213ENST00000560856 TBC1D9Q6ZT07 1266 aa18.75■□□□□ 0.59
SNRPA1-213ENST00000560856 AACSQ86V21 672 aa18.75■□□□□ 0.59
SNRPA1-213ENST00000560856 ZGPATQ8N5A5 531 aaKnown RBP18.75■□□□□ 0.59
SNRPA1-213ENST00000560856 DCTPP1Q9H773 170 aa18.75■□□□□ 0.59
SNRPA1-213ENST00000560856 APBB1O00213 710 aa18.74■□□□□ 0.59
SNRPA1-213ENST00000560856 TTC39AQ5SRH9 613 aa18.74■□□□□ 0.59
SNRPA1-213ENST00000560856 HHIPL1Q96JK4 782 aa18.74■□□□□ 0.59
SNRPA1-213ENST00000560856 VEZTQ9HBM0 779 aa18.74■□□□□ 0.59
SNRPA1-213ENST00000560856 SNRKQ9NRH2 765 aa18.74■□□□□ 0.59
SNRPA1-213ENST00000560856 ABCF2Q9UG63 623 aa18.74■□□□□ 0.59
SNRPA1-213ENST00000560856 SUPT16HQ9Y5B9 1047 aaKnown RBP18.74■□□□□ 0.59
SNRPA1-213ENST00000560856 RASA3Q14644 834 aa18.73■□□□□ 0.59
SNRPA1-213ENST00000560856 SPTY2D1Q68D10 685 aaPredicted RBP18.73■□□□□ 0.59
SNRPA1-213ENST00000560856 CLASRPQ8N2M8 674 aaKnown RBP18.73■□□□□ 0.59
SNRPA1-213ENST00000560856 C2orf69Q8N8R5 385 aa18.73■□□□□ 0.59
SNRPA1-213ENST00000560856 FAM163AQ96GL9 167 aaPredicted RBP18.73■□□□□ 0.59
SNRPA1-213ENST00000560856 GAKO14976 1311 aa18.73■□□□□ 0.59
SNRPA1-213ENST00000560856 PCNTO95613 3336 aa18.72■□□□□ 0.59
SNRPA1-213ENST00000560856 CYP2E1P05181 493 aaPredicted RBP18.72■□□□□ 0.59
SNRPA1-213ENST00000560856 HUNKP57058 714 aa18.72■□□□□ 0.59
SNRPA1-213ENST00000560856 ERICH6Q7L0X2 663 aa18.72■□□□□ 0.59
SNRPA1-213ENST00000560856 TEPSINQ96N21 525 aa18.72■□□□□ 0.59
SNRPA1-213ENST00000560856 PPP2R3BQ9Y5P8 575 aa18.72■□□□□ 0.59
SNRPA1-213ENST00000560856 ZAP70P43403 619 aa18.71■□□□□ 0.59
SNRPA1-213ENST00000560856 CACNB3P54284 484 aa18.71■□□□□ 0.59
SNRPA1-213ENST00000560856 FKBP1BP68106 108 aa18.71■□□□□ 0.59
SNRPA1-213ENST00000560856 MECOMQ03112 1051 aa18.71■□□□□ 0.59
SNRPA1-213ENST00000560856 FKBP1CQ5VVH2 108 aa18.71■□□□□ 0.59
SNRPA1-213ENST00000560856 CYP4F22Q6NT55 531 aa18.71■□□□□ 0.59
SNRPA1-213ENST00000560856 CDC42EP5Q6NZY7 148 aa18.71■□□□□ 0.59
SNRPA1-213ENST00000560856 MOB2Q70IA6 237 aa18.71■□□□□ 0.59
SNRPA1-213ENST00000560856 NSUN4Q96CB9 384 aaKnown RBP18.71■□□□□ 0.59
SNRPA1-213ENST00000560856 CAPNS2Q96L46 248 aa18.71■□□□□ 0.59
SNRPA1-213ENST00000560856 SSC5DA1L4H1 1573 aa18.71■□□□□ 0.59
SNRPA1-213ENST00000560856 WDR33Q9C0J8 1336 aaKnown RBP18.71■□□□□ 0.59
SNRPA1-213ENST00000560856 TCP10L2B9ZVM9 353 aa18.7■□□□□ 0.58
SNRPA1-213ENST00000560856 SMARCA5O60264 1052 aaPredicted RBP18.7■□□□□ 0.58
SNRPA1-213ENST00000560856 NBPF12Q5TAG4 269 aaPredicted RBP18.7■□□□□ 0.58
SNRPA1-213ENST00000560856 CDAN1Q8IWY9 1227 aa18.7■□□□□ 0.58
SNRPA1-213ENST00000560856 LRRCC1Q9C099 1032 aa18.7■□□□□ 0.58
SNRPA1-213ENST00000560856 MYH2Q9UKX2 1941 aa18.69■□□□□ 0.58
SNRPA1-213ENST00000560856 PAPPA2Q9BXP8 1791 aa18.69■□□□□ 0.58
SNRPA1-213ENST00000560856 TNFAIP1Q13829 316 aa18.69■□□□□ 0.58
SNRPA1-213ENST00000560856 DZIP1Q86YF9 867 aaKnown RBP18.69■□□□□ 0.58
SNRPA1-213ENST00000560856 EXOC6Q8TAG9 804 aa18.69■□□□□ 0.58
SNRPA1-213ENST00000560856 PIH1D3Q9NQM4 214 aaKnown RBP18.69■□□□□ 0.58
SNRPA1-213ENST00000560856 UBE2Q2LH0YL09 131 aa18.68■□□□□ 0.58
SNRPA1-213ENST00000560856 IFIT2P09913 472 aaKnown RBP18.68■□□□□ 0.58
SNRPA1-213ENST00000560856 AAMPQ13685 434 aa18.68■□□□□ 0.58
SNRPA1-213ENST00000560856 FAM83AQ86UY5 434 aa18.68■□□□□ 0.58
SNRPA1-213ENST00000560856 TMEM39BQ9GZU3 492 aa18.68■□□□□ 0.58
SNRPA1-213ENST00000560856 NDUFB9Q9Y6M9 179 aa18.68■□□□□ 0.58
SNRPA1-213ENST00000560856 MROH7-TTC4A0A0A0MT08 1334 aa18.68■□□□□ 0.58
SNRPA1-213ENST00000560856 GPR75-ASB3A0A0A6YYF3 556 aa18.67■□□□□ 0.58
SNRPA1-213ENST00000560856 FAM155AB1AL88 458 aaPredicted RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms