RNA–Protein interactions for RNA: ENST00000560808.1

NEO1-211, Transcript of neogenin 1, humanhuman

TSL 3

Gene NEO1, Length 1,046 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEO1-211ENST00000560808 ANKRD44Q8N8A2 993 aa12.02□□□□□ -0.49
NEO1-211ENST00000560808 OPTNQ96CV9 577 aa12.02□□□□□ -0.49
NEO1-211ENST00000560808 TEPSINQ96N21 525 aa12.02□□□□□ -0.49
NEO1-211ENST00000560808 PTPN18Q99952 460 aa12.02□□□□□ -0.49
NEO1-211ENST00000560808 TMEM39BQ9GZU3 492 aa12.02□□□□□ -0.49
NEO1-211ENST00000560808 TESPA1A2RU30 521 aaPredicted RBP12.01□□□□□ -0.49
NEO1-211ENST00000560808 HDLBPQ00341 1268 aaKnown RBP12.01□□□□□ -0.49
NEO1-211ENST00000560808 CRHR2Q13324 411 aa12.01□□□□□ -0.49
NEO1-211ENST00000560808 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.01□□□□□ -0.49
NEO1-211ENST00000560808 OTOP1Q7RTM1 612 aa12.01□□□□□ -0.49
NEO1-211ENST00000560808 CDAN1Q8IWY9 1227 aa12.01□□□□□ -0.49
NEO1-211ENST00000560808 KLHDC4Q8TBB5 520 aa12.01□□□□□ -0.49
NEO1-211ENST00000560808 TBC1D22AQ8WUA7 517 aa12.01□□□□□ -0.49
NEO1-211ENST00000560808 SSH1Q8WYL5 1049 aa12.01□□□□□ -0.49
NEO1-211ENST00000560808 USP44Q9H0E7 712 aa12.01□□□□□ -0.49
NEO1-211ENST00000560808 ZNF521Q96K83 1311 aa12.01□□□□□ -0.49
NEO1-211ENST00000560808 SSC5DA1L4H1 1573 aa12.01□□□□□ -0.49
NEO1-211ENST00000560808 CNKSR2Q8WXI2 1034 aa12□□□□□ -0.49
NEO1-211ENST00000560808 TEKT1Q969V4 418 aa12□□□□□ -0.49
NEO1-211ENST00000560808 ERO1AQ96HE7 468 aa12□□□□□ -0.49
NEO1-211ENST00000560808 MS4A4AQ96JQ5 239 aa12□□□□□ -0.49
NEO1-211ENST00000560808 MRIQ9BWK5 157 aa12□□□□□ -0.49
NEO1-211ENST00000560808 PTPRCP08575 1304 aa12□□□□□ -0.49
NEO1-211ENST00000560808 PSME4Q14997 1843 aa12□□□□□ -0.49
NEO1-211ENST00000560808 E9PSI1 815 aa11.99□□□□□ -0.49
NEO1-211ENST00000560808 IFIT1P09914 478 aaKnown RBP11.99□□□□□ -0.49
NEO1-211ENST00000560808 GTF2A2P52657 109 aa11.99□□□□□ -0.49
NEO1-211ENST00000560808 CACNB3P54284 484 aa11.99□□□□□ -0.49
NEO1-211ENST00000560808 SP3Q02447 781 aa11.99□□□□□ -0.49
NEO1-211ENST00000560808 VGLL4Q14135 290 aa11.99□□□□□ -0.49
NEO1-211ENST00000560808 PRPF38BQ5VTL8 546 aaKnown RBP11.99□□□□□ -0.49
NEO1-211ENST00000560808 INTS3Q68E01 1043 aaKnown RBP11.99□□□□□ -0.49
NEO1-211ENST00000560808 VGLL2Q8N8G2 317 aa11.99□□□□□ -0.49
NEO1-211ENST00000560808 CD99L2Q8TCZ2 262 aa11.99□□□□□ -0.49
NEO1-211ENST00000560808 EFCC1Q9HA90 598 aa11.99□□□□□ -0.49
NEO1-211ENST00000560808 PTPN22Q9Y2R2 807 aa11.99□□□□□ -0.49
NEO1-211ENST00000560808 CSADQ9Y600 493 aa11.99□□□□□ -0.49
NEO1-211ENST00000560808 AKAP11Q9UKA4 1901 aa11.99□□□□□ -0.49
NEO1-211ENST00000560808 CCL15-CCL14A0A0B4J2E2 113 aa11.98□□□□□ -0.49
NEO1-211ENST00000560808 PUM3Q15397 648 aaKnown RBP11.98□□□□□ -0.49
NEO1-211ENST00000560808 CCL15Q16663 113 aa11.98□□□□□ -0.49
NEO1-211ENST00000560808 APOBEC3HQ6NTF7 200 aaKnown RBP11.98□□□□□ -0.49
NEO1-211ENST00000560808 BRI3BPQ8WY22 251 aa11.98□□□□□ -0.49
NEO1-211ENST00000560808 ZDHHC15Q96MV8 337 aa11.98□□□□□ -0.49
NEO1-211ENST00000560808 TMOD2Q9NZR1 351 aa11.98□□□□□ -0.49
NEO1-211ENST00000560808 MYH3P11055 1940 aa11.98□□□□□ -0.49
NEO1-211ENST00000560808 SPEF2Q9C093 1822 aa11.97□□□□□ -0.49
NEO1-211ENST00000560808 EYA2O00167 538 aa11.97□□□□□ -0.49
NEO1-211ENST00000560808 FGFR2P21802 821 aa11.97□□□□□ -0.49
NEO1-211ENST00000560808 SLFN5Q08AF3 891 aa11.97□□□□□ -0.49
NEO1-211ENST00000560808 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.97□□□□□ -0.49
NEO1-211ENST00000560808 OTUD5Q96G74 571 aa11.97□□□□□ -0.49
NEO1-211ENST00000560808 ZFYVE28Q9HCC9 887 aa11.97□□□□□ -0.49
NEO1-211ENST00000560808 SUGT1Q9Y2Z0 365 aa11.97□□□□□ -0.49
NEO1-211ENST00000560808 TNRC18O15417 2968 aaPredicted RBP11.96□□□□□ -0.49
NEO1-211ENST00000560808 POTEFA5A3E0 1075 aa11.96□□□□□ -0.49
NEO1-211ENST00000560808 SLC5A1P13866 664 aa11.96□□□□□ -0.49
NEO1-211ENST00000560808 RFX5P48382 616 aaPredicted RBP11.96□□□□□ -0.49
NEO1-211ENST00000560808 ARHGEF6Q15052 776 aa11.96□□□□□ -0.49
NEO1-211ENST00000560808 TAF1CQ15572 869 aaPredicted RBP11.96□□□□□ -0.49
NEO1-211ENST00000560808 FKBP1CQ5VVH2 108 aa11.96□□□□□ -0.49
NEO1-211ENST00000560808 HHIPL2Q6UWX4 724 aa11.96□□□□□ -0.49
NEO1-211ENST00000560808 MIGA2Q7L4E1 593 aa11.96□□□□□ -0.49
NEO1-211ENST00000560808 FAM83AQ86UY5 434 aa11.96□□□□□ -0.49
NEO1-211ENST00000560808 FAM43AQ8N2R8 423 aa11.96□□□□□ -0.49
NEO1-211ENST00000560808 WDR66Q8TBY9 1149 aa11.96□□□□□ -0.49
NEO1-211ENST00000560808 LPIN2Q92539 896 aa11.96□□□□□ -0.49
NEO1-211ENST00000560808 ZKSCAN4Q969J2 545 aaPredicted RBP11.96□□□□□ -0.49
NEO1-211ENST00000560808 HOOK2Q96ED9 719 aa11.96□□□□□ -0.49
NEO1-211ENST00000560808 CDCA7LQ96GN5 454 aa11.96□□□□□ -0.49
NEO1-211ENST00000560808 MAST3O60307 1309 aa11.95□□□□□ -0.5
NEO1-211ENST00000560808 SPDYE5A6NIY4 337 aa11.95□□□□□ -0.5
NEO1-211ENST00000560808 WDHD1O75717 1129 aaPredicted RBP11.95□□□□□ -0.5
NEO1-211ENST00000560808 CETPP11597 493 aa11.95□□□□□ -0.5
NEO1-211ENST00000560808 CAP1Q01518 475 aa11.95□□□□□ -0.5
NEO1-211ENST00000560808 ALDH1L2Q3SY69 923 aa11.95□□□□□ -0.5
NEO1-211ENST00000560808 ERO1BQ86YB8 467 aa11.95□□□□□ -0.5
NEO1-211ENST00000560808 WRNIP1Q96S55 665 aa11.95□□□□□ -0.5
NEO1-211ENST00000560808 SMC4Q9NTJ3 1288 aa11.95□□□□□ -0.5
NEO1-211ENST00000560808 KIF16BQ96L93 1317 aa11.94□□□□□ -0.5
NEO1-211ENST00000560808 IRF6O14896 467 aa11.94□□□□□ -0.5
NEO1-211ENST00000560808 SNAPC2Q13487 334 aa11.94□□□□□ -0.5
NEO1-211ENST00000560808 DCAF15Q66K64 600 aa11.94□□□□□ -0.5
NEO1-211ENST00000560808 ATG9AQ7Z3C6 839 aa11.94□□□□□ -0.5
NEO1-211ENST00000560808 ARMC5Q96C12 935 aa11.94□□□□□ -0.5
NEO1-211ENST00000560808 SIL1Q9H173 461 aa11.94□□□□□ -0.5
NEO1-211ENST00000560808 GNL3LQ9NVN8 582 aaKnown RBP11.94□□□□□ -0.5
NEO1-211ENST00000560808 CEP126Q9P2H0 1117 aa11.94□□□□□ -0.5
NEO1-211ENST00000560808 SNCAIPQ9Y6H5 919 aa11.94□□□□□ -0.5
NEO1-211ENST00000560808 ZNF646O15015 1829 aaPredicted RBP11.94□□□□□ -0.5
NEO1-211ENST00000560808 BTBD19C9JJ37 291 aa11.93□□□□□ -0.5
NEO1-211ENST00000560808 UBTFL1P0CB47 393 aaPredicted RBP11.93□□□□□ -0.5
NEO1-211ENST00000560808 EN2P19622 333 aaPredicted RBP11.93□□□□□ -0.5
NEO1-211ENST00000560808 TCP10Q12799 353 aa11.93□□□□□ -0.5
NEO1-211ENST00000560808 CDC42EP5Q6NZY7 148 aa11.93□□□□□ -0.5
NEO1-211ENST00000560808 NBPF11Q86T75 865 aa11.93□□□□□ -0.5
NEO1-211ENST00000560808 TMEM106CQ9BVX2 250 aa11.93□□□□□ -0.5
NEO1-211ENST00000560808 ZNF341Q9BYN7 854 aa11.93□□□□□ -0.5
NEO1-211ENST00000560808 NOB1Q9ULX3 412 aaKnown RBP11.93□□□□□ -0.5
NEO1-211ENST00000560808 PDE4DIPQ5VU43 2346 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms