RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 CERKQ8TCT0 537 aa8□□□□□ -1.13
TSPAN3-209ENST00000560715 E2F7Q96AV8 911 aa8□□□□□ -1.13
TSPAN3-209ENST00000560715 FAM129BQ96TA1 746 aa8□□□□□ -1.13
TSPAN3-209ENST00000560715 SPON2Q9BUD6 331 aa8□□□□□ -1.13
TSPAN3-209ENST00000560715 OGFRQ9NZT2 677 aa8□□□□□ -1.13
TSPAN3-209ENST00000560715 POGZQ7Z3K3 1410 aa8□□□□□ -1.13
TSPAN3-209ENST00000560715 HECW2Q9P2P5 1572 aa8□□□□□ -1.13
TSPAN3-209ENST00000560715 CAPN2P17655 700 aa7.99□□□□□ -1.13
TSPAN3-209ENST00000560715 LIG1P18858 919 aa7.99□□□□□ -1.13
TSPAN3-209ENST00000560715 NFX1Q12986 1120 aaKnown RBP7.99□□□□□ -1.13
TSPAN3-209ENST00000560715 LMTK2Q8IWU2 1503 aa7.99□□□□□ -1.13
TSPAN3-209ENST00000560715 ST20-MTHFSA0A0A6YYL1 179 aa7.99□□□□□ -1.13
TSPAN3-209ENST00000560715 KIF3BO15066 747 aa7.99□□□□□ -1.13
TSPAN3-209ENST00000560715 TBX3O15119 743 aa7.99□□□□□ -1.13
TSPAN3-209ENST00000560715 PIP5K1CO60331 668 aa7.99□□□□□ -1.13
TSPAN3-209ENST00000560715 CAND2O75155 1236 aa7.99□□□□□ -1.13
TSPAN3-209ENST00000560715 MYCLP1P12525 358 aaPredicted RBP7.99□□□□□ -1.13
TSPAN3-209ENST00000560715 RAB15P59190 212 aa7.99□□□□□ -1.13
TSPAN3-209ENST00000560715 GRAMD1BQ3KR37 738 aa7.99□□□□□ -1.13
TSPAN3-209ENST00000560715 INO80DQ53TQ3 878 aaPredicted RBP7.99□□□□□ -1.13
TSPAN3-209ENST00000560715 ADAM32Q8TC27 787 aa7.99□□□□□ -1.13
TSPAN3-209ENST00000560715 BCL2L12Q9HB09 334 aa7.99□□□□□ -1.13
TSPAN3-209ENST00000560715 AK5Q9Y6K8 562 aa7.99□□□□□ -1.13
TSPAN3-209ENST00000560715 KIF1BO60333 1816 aa7.98□□□□□ -1.13
TSPAN3-209ENST00000560715 ARHGAP31Q2M1Z3 1444 aa7.98□□□□□ -1.13
TSPAN3-209ENST00000560715 TRIM6-TRIM34B2RNG4 842 aa7.98□□□□□ -1.13
TSPAN3-209ENST00000560715 AKAP10O43572 662 aa7.98□□□□□ -1.13
TSPAN3-209ENST00000560715 NBNO60934 754 aa7.98□□□□□ -1.13
TSPAN3-209ENST00000560715 SLFN14P0C7P3 912 aa7.98□□□□□ -1.13
TSPAN3-209ENST00000560715 U2AF2P26368 475 aaKnown RBP eCLIP7.98□□□□□ -1.13
TSPAN3-209ENST00000560715 FAM193AP78312 1265 aa7.98□□□□□ -1.13
TSPAN3-209ENST00000560715 CBX2Q14781 532 aaPredicted RBP7.98□□□□□ -1.13
TSPAN3-209ENST00000560715 ARMC3Q5W041 872 aa7.98□□□□□ -1.13
TSPAN3-209ENST00000560715 ERAP2Q6P179 960 aa7.98□□□□□ -1.13
TSPAN3-209ENST00000560715 SPATC1Q76KD6 591 aa7.98□□□□□ -1.13
TSPAN3-209ENST00000560715 CEP63Q96MT8 703 aa7.98□□□□□ -1.13
TSPAN3-209ENST00000560715 C22orf23Q9BZE7 217 aa7.98□□□□□ -1.13
TSPAN3-209ENST00000560715 RBSNQ9H1K0 784 aa7.98□□□□□ -1.13
TSPAN3-209ENST00000560715 TYW1Q9NV66 732 aaKnown RBP7.98□□□□□ -1.13
TSPAN3-209ENST00000560715 PPT2Q9UMR5 302 aa7.98□□□□□ -1.13
TSPAN3-209ENST00000560715 MADDQ8WXG6 1647 aa7.98□□□□□ -1.13
TSPAN3-209ENST00000560715 TSPOAP1O95153 1857 aa7.98□□□□□ -1.13
TSPAN3-209ENST00000560715 EFCAB6Q5THR3 1501 aa7.98□□□□□ -1.13
TSPAN3-209ENST00000560715 KIAA1210Q9ULL0 1709 aa7.98□□□□□ -1.13
TSPAN3-209ENST00000560715 GOLGA6L22H0YM25 854 aa7.98□□□□□ -1.13
TSPAN3-209ENST00000560715 CTHP32929 405 aa7.98□□□□□ -1.13
TSPAN3-209ENST00000560715 CT47A1Q5JQC4 288 aaPredicted RBP7.98□□□□□ -1.13
TSPAN3-209ENST00000560715 DUSP27Q5VZP5 1158 aa7.98□□□□□ -1.13
TSPAN3-209ENST00000560715 CLEC17AQ6ZS10 378 aa7.98□□□□□ -1.13
TSPAN3-209ENST00000560715 ANKRD7Q92527 254 aa7.98□□□□□ -1.13
TSPAN3-209ENST00000560715 MAP3K4Q9Y6R4 1608 aa7.98□□□□□ -1.13
TSPAN3-209ENST00000560715 SRGNP10124 158 aa7.97□□□□□ -1.13
TSPAN3-209ENST00000560715 USP46P62068 366 aa7.97□□□□□ -1.13
TSPAN3-209ENST00000560715 KCTD2Q14681 263 aa7.97□□□□□ -1.13
TSPAN3-209ENST00000560715 ICE2Q659A1 982 aa7.97□□□□□ -1.13
TSPAN3-209ENST00000560715 HOMER1Q86YM7 354 aa7.97□□□□□ -1.13
TSPAN3-209ENST00000560715 KHSRPQ92945 711 aaKnown RBP eCLIP7.97□□□□□ -1.13
TSPAN3-209ENST00000560715 ZDHHC16Q969W1 377 aa7.97□□□□□ -1.13
TSPAN3-209ENST00000560715 EFCC1Q9HA90 598 aa7.97□□□□□ -1.13
TSPAN3-209ENST00000560715 CALCOCO1Q9P1Z2 691 aa7.97□□□□□ -1.13
TSPAN3-209ENST00000560715 PCDH10Q9P2E7 1040 aa7.97□□□□□ -1.13
TSPAN3-209ENST00000560715 PARD3Q8TEW0 1356 aa7.97□□□□□ -1.13
TSPAN3-209ENST00000560715 DIAPH1O60610 1272 aaKnown RBP7.97□□□□□ -1.13
TSPAN3-209ENST00000560715 NOS2P35228 1153 aa7.97□□□□□ -1.13
TSPAN3-209ENST00000560715 HDAC1Q13547 482 aaPredicted RBP7.97□□□□□ -1.13
TSPAN3-209ENST00000560715 PROX2Q3B8N5 592 aa7.97□□□□□ -1.13
TSPAN3-209ENST00000560715 ANO1Q5XXA6 986 aa7.97□□□□□ -1.13
TSPAN3-209ENST00000560715 TNS4Q8IZW8 715 aa7.97□□□□□ -1.13
TSPAN3-209ENST00000560715 NGEFQ8N5V2 710 aa7.97□□□□□ -1.13
TSPAN3-209ENST00000560715 ATL2Q8NHH9 583 aa7.97□□□□□ -1.13
TSPAN3-209ENST00000560715 TATDN2Q93075 761 aa7.97□□□□□ -1.13
TSPAN3-209ENST00000560715 ZNF622Q969S3 477 aaKnown RBP eCLIP7.97□□□□□ -1.13
TSPAN3-209ENST00000560715 SNX21Q969T3 373 aa7.97□□□□□ -1.13
TSPAN3-209ENST00000560715 DMRTB1Q96MA1 342 aa7.97□□□□□ -1.13
TSPAN3-209ENST00000560715 DIS3Q9Y2L1 958 aaKnown RBP7.97□□□□□ -1.13
TSPAN3-209ENST00000560715 SCINQ9Y6U3 715 aa7.97□□□□□ -1.13
TSPAN3-209ENST00000560715 DDX49Q9Y6V7 483 aaKnown RBP7.97□□□□□ -1.13
TSPAN3-209ENST00000560715 GLI2P10070 1586 aa7.97□□□□□ -1.13
TSPAN3-209ENST00000560715 APPP05067 770 aa7.96□□□□□ -1.13
TSPAN3-209ENST00000560715 RAPGEF1Q13905 1077 aa7.96□□□□□ -1.13
TSPAN3-209ENST00000560715 USPL1Q5W0Q7 1092 aa7.96□□□□□ -1.13
TSPAN3-209ENST00000560715 PARD3BQ8TEW8 1205 aa7.96□□□□□ -1.13
TSPAN3-209ENST00000560715 MTMR8Q96EF0 704 aa7.96□□□□□ -1.13
TSPAN3-209ENST00000560715 TSPAN10Q9H1Z9 355 aaPredicted RBP7.96□□□□□ -1.13
TSPAN3-209ENST00000560715 ADAMTS1Q9UHI8 967 aa7.96□□□□□ -1.13
TSPAN3-209ENST00000560715 LRFN2Q9ULH4 789 aa7.96□□□□□ -1.13
TSPAN3-209ENST00000560715 IQGAP1P46940 1657 aa7.96□□□□□ -1.13
TSPAN3-209ENST00000560715 PPRC1Q5VV67 1664 aaKnown RBP7.96□□□□□ -1.13
TSPAN3-209ENST00000560715 RNF40O75150 1001 aa7.96□□□□□ -1.14
TSPAN3-209ENST00000560715 NFKB2Q00653 900 aa7.96□□□□□ -1.14
TSPAN3-209ENST00000560715 TCIRG1Q13488 830 aa7.96□□□□□ -1.14
TSPAN3-209ENST00000560715 RNF19BQ6ZMZ0 732 aa7.96□□□□□ -1.14
TSPAN3-209ENST00000560715 EPS8L3Q8TE67 593 aaKnown RBP7.96□□□□□ -1.14
TSPAN3-209ENST00000560715 SIRPGQ9P1W8 387 aa7.96□□□□□ -1.14
TSPAN3-209ENST00000560715 PDZRN3Q9UPQ7 1066 aa7.96□□□□□ -1.14
TSPAN3-209ENST00000560715 FRMPD1Q5SYB0 1578 aa7.96□□□□□ -1.14
TSPAN3-209ENST00000560715 ABCA6Q8N139 1617 aa7.96□□□□□ -1.14
TSPAN3-209ENST00000560715 PTCD1O75127 700 aaKnown RBP7.96□□□□□ -1.14
TSPAN3-209ENST00000560715 POU5F1BQ06416 359 aa7.96□□□□□ -1.14
TSPAN3-209ENST00000560715 Q3C1V9 767 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms