RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 SNCAIPQ9Y6H5 919 aa12.7□□□□□ -0.38
TPM1-225ENST00000560679 FAM205AQ6ZU69 1335 aa12.69□□□□□ -0.38
TPM1-225ENST00000560679 SPDYE5A6NIY4 337 aa12.69□□□□□ -0.38
TPM1-225ENST00000560679 BTBD19C9JJ37 291 aa12.69□□□□□ -0.38
TPM1-225ENST00000560679 ARHGEF6Q15052 776 aa12.69□□□□□ -0.38
TPM1-225ENST00000560679 TSR2Q969E8 191 aaKnown RBP12.69□□□□□ -0.38
TPM1-225ENST00000560679 SERPINA10Q9UK55 444 aa12.69□□□□□ -0.38
TPM1-225ENST00000560679 ANKRD18BA2A2Z9 1011 aa12.68□□□□□ -0.38
TPM1-225ENST00000560679 TCP10L2B9ZVM9 353 aa12.68□□□□□ -0.38
TPM1-225ENST00000560679 DLL1O00548 723 aa12.68□□□□□ -0.38
TPM1-225ENST00000560679 MAP3K9P80192 1104 aa12.68□□□□□ -0.38
TPM1-225ENST00000560679 FOXO4P98177 505 aa12.68□□□□□ -0.38
TPM1-225ENST00000560679 CALD1Q05682 793 aaKnown RBP12.68□□□□□ -0.38
TPM1-225ENST00000560679 GRIK5Q16478 980 aa12.68□□□□□ -0.38
TPM1-225ENST00000560679 MFSD14BQ5SR56 506 aa12.68□□□□□ -0.38
TPM1-225ENST00000560679 DZIP1LQ8IYY4 767 aaKnown RBP12.68□□□□□ -0.38
TPM1-225ENST00000560679 ADGRA2Q96PE1 1338 aa12.67□□□□□ -0.38
TPM1-225ENST00000560679 TRIM47Q96LD4 638 aa12.67□□□□□ -0.38
TPM1-225ENST00000560679 ZCCHC17Q9NP64 241 aaKnown RBP12.67□□□□□ -0.38
TPM1-225ENST00000560679 TTF2Q9UNY4 1162 aaKnown RBP12.67□□□□□ -0.38
TPM1-225ENST00000560679 CSADQ9Y600 493 aa12.67□□□□□ -0.38
TPM1-225ENST00000560679 IRF6O14896 467 aa12.66□□□□□ -0.38
TPM1-225ENST00000560679 ECM2O94769 699 aaPredicted RBP12.66□□□□□ -0.38
TPM1-225ENST00000560679 FLIIQ13045 1269 aa12.66□□□□□ -0.38
TPM1-225ENST00000560679 C17orf99Q6UX52 265 aa12.66□□□□□ -0.38
TPM1-225ENST00000560679 TDRD7Q8NHU6 1098 aaKnown RBP12.66□□□□□ -0.38
TPM1-225ENST00000560679 DPF3Q92784 378 aa12.66□□□□□ -0.38
TPM1-225ENST00000560679 STK31Q9BXU1 1019 aa12.66□□□□□ -0.38
TPM1-225ENST00000560679 CHMP4AQ9BY43 222 aa12.66□□□□□ -0.38
TPM1-225ENST00000560679 UNC80Q8N2C7 3258 aa12.66□□□□□ -0.38
TPM1-225ENST00000560679 ALPK3Q96L96 1907 aa12.65□□□□□ -0.38
TPM1-225ENST00000560679 SOX1O00570 391 aaPredicted RBP12.65□□□□□ -0.38
TPM1-225ENST00000560679 GNRH1P01148 92 aa12.65□□□□□ -0.38
TPM1-225ENST00000560679 SLC4A2P04920 1241 aa12.65□□□□□ -0.38
TPM1-225ENST00000560679 CETPP11597 493 aa12.65□□□□□ -0.38
TPM1-225ENST00000560679 OSBPP22059 807 aa12.65□□□□□ -0.38
TPM1-225ENST00000560679 CRKP46108 304 aa12.65□□□□□ -0.38
TPM1-225ENST00000560679 CACNB3P54284 484 aa12.65□□□□□ -0.38
TPM1-225ENST00000560679 PRMT2P55345 433 aa12.65□□□□□ -0.38
TPM1-225ENST00000560679 IFIT5Q13325 482 aaKnown RBP12.65□□□□□ -0.38
TPM1-225ENST00000560679 EPHA10Q5JZY3 1008 aa12.65□□□□□ -0.38
TPM1-225ENST00000560679 ERO1BQ86YB8 467 aa12.65□□□□□ -0.38
TPM1-225ENST00000560679 SLC17A8Q8NDX2 589 aa12.65□□□□□ -0.38
TPM1-225ENST00000560679 LINS1Q8NG48 757 aa12.65□□□□□ -0.38
TPM1-225ENST00000560679 DNAAF4Q8WXU2 420 aa12.65□□□□□ -0.38
TPM1-225ENST00000560679 ZKSCAN4Q969J2 545 aaPredicted RBP12.65□□□□□ -0.38
TPM1-225ENST00000560679 ZNF594Q96JF6 807 aaPredicted RBP12.65□□□□□ -0.38
TPM1-225ENST00000560679 MYH16Q9H6N6 1097 aa12.65□□□□□ -0.38
TPM1-225ENST00000560679 SRRDQ9UH36 339 aa12.65□□□□□ -0.38
TPM1-225ENST00000560679 ZBTB7BO15156 539 aaPredicted RBP12.64□□□□□ -0.39
TPM1-225ENST00000560679 CCL5P13501 91 aa12.64□□□□□ -0.39
TPM1-225ENST00000560679 GYG1P46976 350 aa12.64□□□□□ -0.39
TPM1-225ENST00000560679 GJA8P48165 433 aa12.64□□□□□ -0.39
TPM1-225ENST00000560679 PPIL2Q13356 520 aa12.64□□□□□ -0.39
TPM1-225ENST00000560679 SNAPC2Q13487 334 aa12.64□□□□□ -0.39
TPM1-225ENST00000560679 KIF22Q14807 665 aa12.64□□□□□ -0.39
TPM1-225ENST00000560679 TWISTNBQ3B726 338 aaPredicted RBP12.64□□□□□ -0.39
TPM1-225ENST00000560679 WRNIP1Q96S55 665 aa12.64□□□□□ -0.39
TPM1-225ENST00000560679 CPA4Q9UI42 421 aa12.64□□□□□ -0.39
TPM1-225ENST00000560679 CHMP3Q9Y3E7 222 aa12.64□□□□□ -0.39
TPM1-225ENST00000560679 MGAMO43451 1857 aa12.63□□□□□ -0.39
TPM1-225ENST00000560679 PLIN1O60240 522 aa12.63□□□□□ -0.39
TPM1-225ENST00000560679 GJB1P08034 283 aa12.63□□□□□ -0.39
TPM1-225ENST00000560679 GRK4P32298 578 aa12.63□□□□□ -0.39
TPM1-225ENST00000560679 PSMC4P43686 418 aa12.63□□□□□ -0.39
TPM1-225ENST00000560679 TNNI2P48788 182 aa12.63□□□□□ -0.39
TPM1-225ENST00000560679 DIEXFQ68CQ4 756 aaKnown RBP12.63□□□□□ -0.39
TPM1-225ENST00000560679 LMBR1LQ6UX01 489 aa12.63□□□□□ -0.39
TPM1-225ENST00000560679 LRCH3Q96II8 777 aa12.63□□□□□ -0.39
TPM1-225ENST00000560679 FAM84BQ96KN1 310 aaPredicted RBP12.63□□□□□ -0.39
TPM1-225ENST00000560679 RIPOR2Q9Y4F9 1068 aa12.63□□□□□ -0.39
TPM1-225ENST00000560679 RPAP1Q9BWH6 1393 aaPredicted RBP12.63□□□□□ -0.39
TPM1-225ENST00000560679 MYPNQ86TC9 1320 aa12.62□□□□□ -0.39
TPM1-225ENST00000560679 CACNA1FO60840 1977 aa12.62□□□□□ -0.39
TPM1-225ENST00000560679 WDHD1O75717 1129 aaPredicted RBP12.62□□□□□ -0.39
TPM1-225ENST00000560679 FKBP5Q13451 457 aaPredicted RBP12.62□□□□□ -0.39
TPM1-225ENST00000560679 MOGSQ13724 837 aa12.62□□□□□ -0.39
TPM1-225ENST00000560679 LDHAL6AQ6ZMR3 332 aa12.62□□□□□ -0.39
TPM1-225ENST00000560679 NKX2-3Q8TAU0 364 aa12.62□□□□□ -0.39
TPM1-225ENST00000560679 HTATIP2Q9BUP3 242 aa12.62□□□□□ -0.39
TPM1-225ENST00000560679 FARP2O94887 1054 aaPredicted RBP12.61□□□□□ -0.39
TPM1-225ENST00000560679 HIBADHP31937 336 aaKnown RBP12.61□□□□□ -0.39
TPM1-225ENST00000560679 INPP5BP32019 993 aa12.61□□□□□ -0.39
TPM1-225ENST00000560679 PRKCZQ05513 592 aa12.61□□□□□ -0.39
TPM1-225ENST00000560679 UBE4AQ14139 1066 aa12.61□□□□□ -0.39
TPM1-225ENST00000560679 ANKRD23Q86SG2 305 aa12.61□□□□□ -0.39
TPM1-225ENST00000560679 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.61□□□□□ -0.39
TPM1-225ENST00000560679 RAET1EQ8TD07 263 aa12.61□□□□□ -0.39
TPM1-225ENST00000560679 CNNM1Q9NRU3 951 aa12.61□□□□□ -0.39
TPM1-225ENST00000560679 A0A1W2PPC1 479 aa12.6□□□□□ -0.39
TPM1-225ENST00000560679 F6X3S4 739 aa12.6□□□□□ -0.39
TPM1-225ENST00000560679 PDHXO00330 501 aa12.6□□□□□ -0.39
TPM1-225ENST00000560679 DDX10Q13206 875 aaKnown RBP12.6□□□□□ -0.39
TPM1-225ENST00000560679 CCDC57Q2TAC2 916 aa12.6□□□□□ -0.39
TPM1-225ENST00000560679 BEND3Q5T5X7 828 aa12.6□□□□□ -0.39
TPM1-225ENST00000560679 APOBEC3HQ6NTF7 200 aaKnown RBP12.6□□□□□ -0.39
TPM1-225ENST00000560679 FAM83AQ86UY5 434 aa12.6□□□□□ -0.39
TPM1-225ENST00000560679 U2AF1L4Q8WU68 220 aaKnown RBP12.6□□□□□ -0.39
TPM1-225ENST00000560679 PUS3Q9BZE2 481 aaKnown RBP12.6□□□□□ -0.39
TPM1-225ENST00000560679 RNF208Q9H0X6 261 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms