RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 AIDAQ96BJ3 306 aa16■□□□□ 0.15
CTDSPL2-209ENST00000560620 ZBED3Q96IU2 234 aaPredicted RBP16■□□□□ 0.15
CTDSPL2-209ENST00000560620 DEFB129Q9H1M3 183 aa16■□□□□ 0.15
CTDSPL2-209ENST00000560620 TDRD3Q9H7E2 651 aaKnown RBP16■□□□□ 0.15
CTDSPL2-209ENST00000560620 ECM29Q5VYK3 1845 aa15.99■□□□□ 0.15
CTDSPL2-209ENST00000560620 SEMA3EO15041 775 aa15.99■□□□□ 0.15
CTDSPL2-209ENST00000560620 ZNF157P51786 506 aaPredicted RBP15.99■□□□□ 0.15
CTDSPL2-209ENST00000560620 PRKG1Q13976 671 aa15.99■□□□□ 0.15
CTDSPL2-209ENST00000560620 HHIPL1Q96JK4 782 aa15.99■□□□□ 0.15
CTDSPL2-209ENST00000560620 BEGAINQ9BUH8 593 aa15.99■□□□□ 0.15
CTDSPL2-209ENST00000560620 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.99■□□□□ 0.15
CTDSPL2-209ENST00000560620 AOC2O75106 756 aa15.98■□□□□ 0.15
CTDSPL2-209ENST00000560620 LDHBP07195 334 aaKnown RBP15.98■□□□□ 0.15
CTDSPL2-209ENST00000560620 MAP2K1Q02750 393 aaPredicted RBP15.98■□□□□ 0.15
CTDSPL2-209ENST00000560620 TNFAIP1Q13829 316 aa15.98■□□□□ 0.15
CTDSPL2-209ENST00000560620 C20orf194Q5TEA3 1177 aa15.98■□□□□ 0.15
CTDSPL2-209ENST00000560620 RGMBQ6NW40 437 aa15.98■□□□□ 0.15
CTDSPL2-209ENST00000560620 BCL11AQ9H165 835 aa15.98■□□□□ 0.15
CTDSPL2-209ENST00000560620 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.98■□□□□ 0.15
CTDSPL2-209ENST00000560620 ZNF70Q9UC06 446 aaPredicted RBP15.98■□□□□ 0.15
CTDSPL2-209ENST00000560620 ABCF2Q9UG63 623 aa15.98■□□□□ 0.15
CTDSPL2-209ENST00000560620 SUGT1Q9Y2Z0 365 aa15.98■□□□□ 0.15
CTDSPL2-209ENST00000560620 TCP10L2B9ZVM9 353 aa15.97■□□□□ 0.15
CTDSPL2-209ENST00000560620 PRDX5P30044 214 aa15.97■□□□□ 0.15
CTDSPL2-209ENST00000560620 FKBP1BP68106 108 aa15.97■□□□□ 0.15
CTDSPL2-209ENST00000560620 HDLBPQ00341 1268 aaKnown RBP15.97■□□□□ 0.15
CTDSPL2-209ENST00000560620 RASGRF1Q13972 1273 aa15.97■□□□□ 0.15
CTDSPL2-209ENST00000560620 PDE3AQ14432 1141 aa15.97■□□□□ 0.15
CTDSPL2-209ENST00000560620 MOB2Q70IA6 237 aa15.97■□□□□ 0.15
CTDSPL2-209ENST00000560620 ZGPATQ8N5A5 531 aaKnown RBP15.97■□□□□ 0.15
CTDSPL2-209ENST00000560620 TMOD2Q9NZR1 351 aa15.97■□□□□ 0.15
CTDSPL2-209ENST00000560620 EXOC6BQ9Y2D4 811 aa15.97■□□□□ 0.15
CTDSPL2-209ENST00000560620 PPP2R3BQ9Y5P8 575 aa15.97■□□□□ 0.15
CTDSPL2-209ENST00000560620 COL1A1P02452 1464 aaPredicted RBP15.97■□□□□ 0.15
CTDSPL2-209ENST00000560620 AOX1Q06278 1338 aa15.96■□□□□ 0.15
CTDSPL2-209ENST00000560620 UBE2Q2LH0YL09 131 aa15.96■□□□□ 0.15
CTDSPL2-209ENST00000560620 APBB1O00213 710 aa15.96■□□□□ 0.15
CTDSPL2-209ENST00000560620 HMMRO75330 724 aa15.96■□□□□ 0.15
CTDSPL2-209ENST00000560620 TNNI2P48788 182 aa15.96■□□□□ 0.15
CTDSPL2-209ENST00000560620 RASA3Q14644 834 aa15.96■□□□□ 0.15
CTDSPL2-209ENST00000560620 TNNI3KQ59H18 835 aa15.96■□□□□ 0.15
CTDSPL2-209ENST00000560620 ARMC9Q7Z3E5 817 aa15.96■□□□□ 0.15
CTDSPL2-209ENST00000560620 DZIP1Q86YF9 867 aaKnown RBP15.96■□□□□ 0.15
CTDSPL2-209ENST00000560620 FPGT-TNNI3KV9GXZ4 949 aa15.96■□□□□ 0.15
CTDSPL2-209ENST00000560620 PAPPA2Q9BXP8 1791 aa15.95■□□□□ 0.14
CTDSPL2-209ENST00000560620 MAP2K2P36507 400 aa15.95■□□□□ 0.14
CTDSPL2-209ENST00000560620 NOGQ13253 232 aa15.95■□□□□ 0.14
CTDSPL2-209ENST00000560620 SUPT20HL1Q3ZLR7 823 aa15.95■□□□□ 0.14
CTDSPL2-209ENST00000560620 SPDYE2Q495Y8 402 aa15.95■□□□□ 0.14
CTDSPL2-209ENST00000560620 CCDC158Q5M9N0 1113 aa15.95■□□□□ 0.14
CTDSPL2-209ENST00000560620 TTC39AQ5SRH9 613 aa15.95■□□□□ 0.14
CTDSPL2-209ENST00000560620 ERC1Q8IUD2 1116 aa15.95■□□□□ 0.14
CTDSPL2-209ENST00000560620 CCDC102AQ96A19 550 aa15.95■□□□□ 0.14
CTDSPL2-209ENST00000560620 ZDHHC15Q96MV8 337 aa15.95■□□□□ 0.14
CTDSPL2-209ENST00000560620 ZBTB40Q9NUA8 1239 aa15.95■□□□□ 0.14
CTDSPL2-209ENST00000560620 ANGEL1Q9UNK9 670 aaKnown RBP15.95■□□□□ 0.14
CTDSPL2-209ENST00000560620 NOP58Q9Y2X3 529 aaKnown RBP15.95■□□□□ 0.14
CTDSPL2-209ENST00000560620 PPP1R12BO60237 982 aaPredicted RBP15.94■□□□□ 0.14
CTDSPL2-209ENST00000560620 UQCRFS1P1P0C7P4 283 aa15.94■□□□□ 0.14
CTDSPL2-209ENST00000560620 CACNB3P54284 484 aa15.94■□□□□ 0.14
CTDSPL2-209ENST00000560620 DIXDC1Q155Q3 683 aa15.94■□□□□ 0.14
CTDSPL2-209ENST00000560620 HSP90AB4PQ58FF6 505 aa15.94■□□□□ 0.14
CTDSPL2-209ENST00000560620 SPTY2D1Q68D10 685 aaPredicted RBP15.94■□□□□ 0.14
CTDSPL2-209ENST00000560620 HHIPL2Q6UWX4 724 aa15.94■□□□□ 0.14
CTDSPL2-209ENST00000560620 RPAP2Q8IXW5 612 aaPredicted RBP15.94■□□□□ 0.14
CTDSPL2-209ENST00000560620 MRIQ9BWK5 157 aa15.94■□□□□ 0.14
CTDSPL2-209ENST00000560620 GPR108Q9NPR9 543 aa15.94■□□□□ 0.14
CTDSPL2-209ENST00000560620 SALL1Q9NSC2 1324 aa15.94■□□□□ 0.14
CTDSPL2-209ENST00000560620 FOXN1O15353 648 aa15.93■□□□□ 0.14
CTDSPL2-209ENST00000560620 NBPF12Q5TAG4 269 aaPredicted RBP15.93■□□□□ 0.14
CTDSPL2-209ENST00000560620 PI16Q6UXB8 463 aa15.93■□□□□ 0.14
CTDSPL2-209ENST00000560620 SPATA5Q8NB90 893 aa15.93■□□□□ 0.14
CTDSPL2-209ENST00000560620 DBNDD2Q9BQY9 259 aa15.93■□□□□ 0.14
CTDSPL2-209ENST00000560620 WBP1LQ9NX94 342 aa15.93■□□□□ 0.14
CTDSPL2-209ENST00000560620 FZD1Q9UP38 647 aa15.93■□□□□ 0.14
CTDSPL2-209ENST00000560620 APOBEC3HQ6NTF7 200 aaKnown RBP15.92■□□□□ 0.14
CTDSPL2-209ENST00000560620 ERICH6Q7L0X2 663 aa15.92■□□□□ 0.14
CTDSPL2-209ENST00000560620 SLF2Q8IX21 1173 aa15.92■□□□□ 0.14
CTDSPL2-209ENST00000560620 TMEM39BQ9GZU3 492 aa15.92■□□□□ 0.14
CTDSPL2-209ENST00000560620 CCDC8Q9H0W5 538 aaPredicted RBP15.92■□□□□ 0.14
CTDSPL2-209ENST00000560620 HMG20BQ9P0W2 317 aa15.92■□□□□ 0.14
CTDSPL2-209ENST00000560620 DAGLAQ9Y4D2 1042 aa15.92■□□□□ 0.14
CTDSPL2-209ENST00000560620 PDS5AQ29RF7 1337 aaKnown RBP15.92■□□□□ 0.14
CTDSPL2-209ENST00000560620 SLC10A3P09131 477 aa15.91■□□□□ 0.14
CTDSPL2-209ENST00000560620 ARID4AP29374 1257 aaPredicted RBP15.91■□□□□ 0.14
CTDSPL2-209ENST00000560620 IL1RAPL2Q9NP60 686 aa15.91■□□□□ 0.14
CTDSPL2-209ENST00000560620 SNRKQ9NRH2 765 aa15.91■□□□□ 0.14
CTDSPL2-209ENST00000560620 RAI14Q9P0K7 980 aa15.91■□□□□ 0.14
CTDSPL2-209ENST00000560620 LRP2BPQ9P2M1 347 aa15.91■□□□□ 0.14
CTDSPL2-209ENST00000560620 FAM155AB1AL88 458 aaPredicted RBP15.9■□□□□ 0.14
CTDSPL2-209ENST00000560620 MCAMP43121 646 aa15.9■□□□□ 0.14
CTDSPL2-209ENST00000560620 IREB2P48200 963 aaKnown RBP15.9■□□□□ 0.14
CTDSPL2-209ENST00000560620 CTCFP49711 727 aaPredicted RBP15.9■□□□□ 0.14
CTDSPL2-209ENST00000560620 KIF23Q02241 960 aaPredicted RBP15.9■□□□□ 0.14
CTDSPL2-209ENST00000560620 MKRN3Q13064 507 aaKnown RBP15.9■□□□□ 0.14
CTDSPL2-209ENST00000560620 TBC1D9Q6ZT07 1266 aa15.9■□□□□ 0.14
CTDSPL2-209ENST00000560620 AACSQ86V21 672 aa15.9■□□□□ 0.14
CTDSPL2-209ENST00000560620 ZIC5Q96T25 663 aa15.9■□□□□ 0.14
CTDSPL2-209ENST00000560620 USP40Q9NVE5 1235 aa15.9■□□□□ 0.14
CTDSPL2-209ENST00000560620 TLR7Q9NYK1 1049 aaKnown RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms