RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 PRPF40BQ6NWY9 871 aaKnown RBP10□□□□□ -0.81
CCDC33-209ENST00000560565 ZBTB38Q8NAP3 1195 aaPredicted RBP10□□□□□ -0.81
CCDC33-209ENST00000560565 OTUD7AQ8TE49 926 aaPredicted RBP10□□□□□ -0.81
CCDC33-209ENST00000560565 KCNB2Q92953 911 aa10□□□□□ -0.81
CCDC33-209ENST00000560565 ERO1AQ96HE7 468 aa10□□□□□ -0.81
CCDC33-209ENST00000560565 MRFAP1L1Q96HT8 127 aa10□□□□□ -0.81
CCDC33-209ENST00000560565 KAZALD1Q96I82 304 aa10□□□□□ -0.81
CCDC33-209ENST00000560565 IMPACTQ9P2X3 320 aa10□□□□□ -0.81
CCDC33-209ENST00000560565 FBXO3Q9UK99 471 aa10□□□□□ -0.81
CCDC33-209ENST00000560565 NSFL1CQ9UNZ2 370 aaKnown RBP10□□□□□ -0.81
CCDC33-209ENST00000560565 SPEF2Q9C093 1822 aa9.99□□□□□ -0.81
CCDC33-209ENST00000560565 CCDC85CA6NKD9 419 aa9.99□□□□□ -0.81
CCDC33-209ENST00000560565 APBB1O00213 710 aa9.99□□□□□ -0.81
CCDC33-209ENST00000560565 FIBPO43427 364 aa9.99□□□□□ -0.81
CCDC33-209ENST00000560565 ATP8B1O43520 1251 aa9.99□□□□□ -0.81
CCDC33-209ENST00000560565 TNNT1P13805 278 aa9.99□□□□□ -0.81
CCDC33-209ENST00000560565 CBX1P83916 185 aa9.99□□□□□ -0.81
CCDC33-209ENST00000560565 TYRO3Q06418 890 aa9.99□□□□□ -0.81
CCDC33-209ENST00000560565 TPD52L1Q16890 204 aaPredicted RBP9.99□□□□□ -0.81
CCDC33-209ENST00000560565 SOGA3Q5TF21 947 aa9.99□□□□□ -0.81
CCDC33-209ENST00000560565 FOXD4L5Q5VV16 416 aaPredicted RBP9.99□□□□□ -0.81
CCDC33-209ENST00000560565 RBM43Q6ZSC3 357 aaKnown RBP9.99□□□□□ -0.81
CCDC33-209ENST00000560565 UBE3BQ7Z3V4 1068 aa9.99□□□□□ -0.81
CCDC33-209ENST00000560565 NLRP10Q86W26 655 aa9.99□□□□□ -0.81
CCDC33-209ENST00000560565 ZNF710Q8N1W2 664 aa9.99□□□□□ -0.81
CCDC33-209ENST00000560565 CLASRPQ8N2M8 674 aaKnown RBP9.99□□□□□ -0.81
CCDC33-209ENST00000560565 FOXD4L4Q8WXT5 416 aaPredicted RBP9.99□□□□□ -0.81
CCDC33-209ENST00000560565 RPGRQ92834 1020 aaKnown RBP9.99□□□□□ -0.81
CCDC33-209ENST00000560565 EVI5LQ96CN4 794 aa9.99□□□□□ -0.81
CCDC33-209ENST00000560565 NLRP3Q96P20 1036 aa9.99□□□□□ -0.81
CCDC33-209ENST00000560565 SRRTQ9BXP5 876 aaKnown RBP9.99□□□□□ -0.81
CCDC33-209ENST00000560565 TRIM5Q9C035 493 aa9.99□□□□□ -0.81
CCDC33-209ENST00000560565 BICC1Q9H694 974 aaKnown RBP9.99□□□□□ -0.81
CCDC33-209ENST00000560565 ZSWIM6Q9HCJ5 1215 aa9.99□□□□□ -0.81
CCDC33-209ENST00000560565 COPRSQ9NQ92 184 aa9.99□□□□□ -0.81
CCDC33-209ENST00000560565 RNF181Q9P0P0 153 aa9.99□□□□□ -0.81
CCDC33-209ENST00000560565 TRMT112Q9UI30 125 aaKnown RBP9.99□□□□□ -0.81
CCDC33-209ENST00000560565 DDX41Q9UJV9 622 aaKnown RBP9.99□□□□□ -0.81
CCDC33-209ENST00000560565 CNPY2Q9Y2B0 182 aa9.99□□□□□ -0.81
CCDC33-209ENST00000560565 SNX14Q9Y5W7 946 aa9.99□□□□□ -0.81
CCDC33-209ENST00000560565 MORC2Q9Y6X9 1032 aaPredicted RBP9.99□□□□□ -0.81
CCDC33-209ENST00000560565 MYH7P12883 1935 aa9.99□□□□□ -0.81
CCDC33-209ENST00000560565 MYO1BO43795 1136 aa9.98□□□□□ -0.81
CCDC33-209ENST00000560565 GADD45BO75293 160 aaPredicted RBP9.98□□□□□ -0.81
CCDC33-209ENST00000560565 SURF6O75683 361 aaKnown RBP9.98□□□□□ -0.81
CCDC33-209ENST00000560565 LMNB1P20700 586 aa9.98□□□□□ -0.81
CCDC33-209ENST00000560565 GJB2P29033 226 aa9.98□□□□□ -0.81
CCDC33-209ENST00000560565 AK2P54819 239 aa9.98□□□□□ -0.81
CCDC33-209ENST00000560565 TUBB4BP68371 445 aa9.98□□□□□ -0.81
CCDC33-209ENST00000560565 RASSF7Q02833 373 aa9.98□□□□□ -0.81
CCDC33-209ENST00000560565 BMS1Q14692 1282 aaKnown RBP9.98□□□□□ -0.81
CCDC33-209ENST00000560565 ZRSR1Q15695 479 aaKnown RBP9.98□□□□□ -0.81
CCDC33-209ENST00000560565 CRY2Q49AN0 593 aa9.98□□□□□ -0.81
CCDC33-209ENST00000560565 SLC10A5Q5PT55 438 aa9.98□□□□□ -0.81
CCDC33-209ENST00000560565 LARP1BQ659C4 914 aaKnown RBP9.98□□□□□ -0.81
CCDC33-209ENST00000560565 CEP135Q66GS9 1140 aa9.98□□□□□ -0.81
CCDC33-209ENST00000560565 RUFY3Q7L099 469 aa9.98□□□□□ -0.81
CCDC33-209ENST00000560565 RGS22Q8NE09 1264 aa9.98□□□□□ -0.81
CCDC33-209ENST00000560565 KIF18AQ8NI77 898 aa9.98□□□□□ -0.81
CCDC33-209ENST00000560565 CLSTN2Q9H4D0 955 aa9.98□□□□□ -0.81
CCDC33-209ENST00000560565 NMRK2Q9NPI5 230 aa9.98□□□□□ -0.81
CCDC33-209ENST00000560565 EXOC6BQ9Y2D4 811 aa9.98□□□□□ -0.81
CCDC33-209ENST00000560565 ABCC12Q96J65 1359 aa9.98□□□□□ -0.81
CCDC33-209ENST00000560565 A0A1B0GUL6 1792 aa9.98□□□□□ -0.81
CCDC33-209ENST00000560565 FER1L6Q2WGJ9 1857 aa9.98□□□□□ -0.81
CCDC33-209ENST00000560565 NFKBIEO00221 500 aa9.97□□□□□ -0.81
CCDC33-209ENST00000560565 CASTP20810 708 aaKnown RBP9.97□□□□□ -0.81
CCDC33-209ENST00000560565 HOXA10P31260 410 aaPredicted RBP9.97□□□□□ -0.81
CCDC33-209ENST00000560565 ZNF75DP51815 510 aa9.97□□□□□ -0.81
CCDC33-209ENST00000560565 FOXO4P98177 505 aa9.97□□□□□ -0.81
CCDC33-209ENST00000560565 SLC20A2Q08357 652 aa9.97□□□□□ -0.81
CCDC33-209ENST00000560565 GPS2Q13227 327 aa9.97□□□□□ -0.81
CCDC33-209ENST00000560565 G3BP1Q13283 466 aaKnown RBP eCLIP9.97□□□□□ -0.81
CCDC33-209ENST00000560565 PTPN14Q15678 1187 aa9.97□□□□□ -0.81
CCDC33-209ENST00000560565 STX1AQ16623 288 aa9.97□□□□□ -0.81
CCDC33-209ENST00000560565 PLA2G4DQ86XP0 818 aa9.97□□□□□ -0.81
CCDC33-209ENST00000560565 CCDC150Q8NCX0 1101 aa9.97□□□□□ -0.81
CCDC33-209ENST00000560565 RHPN1Q8TCX5 695 aa9.97□□□□□ -0.81
CCDC33-209ENST00000560565 C7orf43Q8WVR3 580 aa9.97□□□□□ -0.81
CCDC33-209ENST00000560565 RBM17Q96I25 401 aaKnown RBP9.97□□□□□ -0.81
CCDC33-209ENST00000560565 SPATA32Q96LK8 384 aa9.97□□□□□ -0.81
CCDC33-209ENST00000560565 UPF3BQ9BZI7 483 aaKnown RBP9.97□□□□□ -0.81
CCDC33-209ENST00000560565 LSG1Q9H089 658 aaKnown RBP9.97□□□□□ -0.81
CCDC33-209ENST00000560565 CLIP2Q9UDT6 1046 aa9.97□□□□□ -0.81
CCDC33-209ENST00000560565 PALD1Q9ULE6 856 aa9.97□□□□□ -0.81
CCDC33-209ENST00000560565 MTMR6Q9Y217 621 aa9.97□□□□□ -0.81
CCDC33-209ENST00000560565 SH3TC1Q8TE82 1336 aa9.97□□□□□ -0.81
CCDC33-209ENST00000560565 RFX7Q2KHR2 1363 aa9.97□□□□□ -0.81
CCDC33-209ENST00000560565 RIC1Q4ADV7 1423 aa9.97□□□□□ -0.81
CCDC33-209ENST00000560565 TNRC6CQ9HCJ0 1690 aaKnown RBP9.96□□□□□ -0.81
CCDC33-209ENST00000560565 ARAP2Q8WZ64 1704 aa9.96□□□□□ -0.81
CCDC33-209ENST00000560565 VPS37CA5D8V6 355 aaPredicted RBP9.96□□□□□ -0.82
CCDC33-209ENST00000560565 BECN2A8MW95 431 aa9.96□□□□□ -0.82
CCDC33-209ENST00000560565 FOXN1O15353 648 aa9.96□□□□□ -0.82
CCDC33-209ENST00000560565 CSF1RP07333 972 aa9.96□□□□□ -0.82
CCDC33-209ENST00000560565 HMGB1P09429 215 aaKnown RBP9.96□□□□□ -0.82
CCDC33-209ENST00000560565 KCNJ4P48050 445 aa9.96□□□□□ -0.82
CCDC33-209ENST00000560565 CCDC93Q567U6 631 aa9.96□□□□□ -0.82
CCDC33-209ENST00000560565 ZSCAN25Q6NSZ9 544 aa9.96□□□□□ -0.82
CCDC33-209ENST00000560565 GIMAP6Q6P9H5 292 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms