RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 IL1R1P14778 569 aa13.31□□□□□ -0.28
CDC42BPB-207ENST00000560492 EN2P19622 333 aaPredicted RBP13.31□□□□□ -0.28
CDC42BPB-207ENST00000560492 GJA5P36382 358 aa13.31□□□□□ -0.28
CDC42BPB-207ENST00000560492 CASP7P55210 303 aa13.31□□□□□ -0.28
CDC42BPB-207ENST00000560492 ARHGEF6Q15052 776 aa13.31□□□□□ -0.28
CDC42BPB-207ENST00000560492 TAF1CQ15572 869 aaPredicted RBP13.31□□□□□ -0.28
CDC42BPB-207ENST00000560492 SLC4A8Q2Y0W8 1093 aa13.31□□□□□ -0.28
CDC42BPB-207ENST00000560492 LMBR1LQ6UX01 489 aa13.31□□□□□ -0.28
CDC42BPB-207ENST00000560492 LDHAL6AQ6ZMR3 332 aa13.31□□□□□ -0.28
CDC42BPB-207ENST00000560492 ZNF594Q96JF6 807 aaPredicted RBP13.31□□□□□ -0.28
CDC42BPB-207ENST00000560492 TDRD3Q9H7E2 651 aaKnown RBP13.31□□□□□ -0.28
CDC42BPB-207ENST00000560492 TTF2Q9UNY4 1162 aaKnown RBP13.31□□□□□ -0.28
CDC42BPB-207ENST00000560492 HTTP42858 3142 aa13.3□□□□□ -0.28
CDC42BPB-207ENST00000560492 UNCXA6NJT0 531 aa13.3□□□□□ -0.28
CDC42BPB-207ENST00000560492 TCP10L2B9ZVM9 353 aa13.3□□□□□ -0.28
CDC42BPB-207ENST00000560492 F6X3S4 739 aa13.3□□□□□ -0.28
CDC42BPB-207ENST00000560492 FRAT2O75474 233 aaPredicted RBP13.3□□□□□ -0.28
CDC42BPB-207ENST00000560492 TNNI2P48788 182 aa13.3□□□□□ -0.28
CDC42BPB-207ENST00000560492 SLC9C1Q4G0N8 1177 aa13.3□□□□□ -0.28
CDC42BPB-207ENST00000560492 MFSD14BQ5SR56 506 aa13.3□□□□□ -0.28
CDC42BPB-207ENST00000560492 LHX8Q68G74 356 aa13.3□□□□□ -0.28
CDC42BPB-207ENST00000560492 NBPF11Q86T75 865 aa13.3□□□□□ -0.28
CDC42BPB-207ENST00000560492 WWC1Q8IX03 1113 aa13.3□□□□□ -0.28
CDC42BPB-207ENST00000560492 ZNF70Q9UC06 446 aaPredicted RBP13.3□□□□□ -0.28
CDC42BPB-207ENST00000560492 CSADQ9Y600 493 aa13.3□□□□□ -0.28
CDC42BPB-207ENST00000560492 AK9Q5TCS8 1911 aa13.3□□□□□ -0.28
CDC42BPB-207ENST00000560492 AOX1Q06278 1338 aa13.3□□□□□ -0.28
CDC42BPB-207ENST00000560492 MKI67P46013 3256 aaKnown RBP13.29□□□□□ -0.28
CDC42BPB-207ENST00000560492 CCL15-CCL14A0A0B4J2E2 113 aa13.29□□□□□ -0.28
CDC42BPB-207ENST00000560492 ECM2O94769 699 aaPredicted RBP13.29□□□□□ -0.28
CDC42BPB-207ENST00000560492 FKBP1AP62942 108 aaKnown RBP13.29□□□□□ -0.28
CDC42BPB-207ENST00000560492 CCL15Q16663 113 aa13.29□□□□□ -0.28
CDC42BPB-207ENST00000560492 C15orf52Q6ZUT6 534 aaKnown RBP13.29□□□□□ -0.28
CDC42BPB-207ENST00000560492 VPS37DQ86XT2 251 aa13.29□□□□□ -0.28
CDC42BPB-207ENST00000560492 OTUD5Q96G74 571 aa13.29□□□□□ -0.28
CDC42BPB-207ENST00000560492 ZFYVE28Q9HCC9 887 aa13.29□□□□□ -0.28
CDC42BPB-207ENST00000560492 C9orf78Q9NZ63 289 aaPredicted RBP13.29□□□□□ -0.28
CDC42BPB-207ENST00000560492 GYG1P46976 350 aa13.28□□□□□ -0.28
CDC42BPB-207ENST00000560492 FOXO4P98177 505 aa13.28□□□□□ -0.28
CDC42BPB-207ENST00000560492 CHAF1AQ13111 956 aaPredicted RBP13.28□□□□□ -0.28
CDC42BPB-207ENST00000560492 KIF22Q14807 665 aa13.28□□□□□ -0.28
CDC42BPB-207ENST00000560492 SLC4A10Q6U841 1118 aa13.28□□□□□ -0.28
CDC42BPB-207ENST00000560492 PTPN18Q99952 460 aa13.28□□□□□ -0.28
CDC42BPB-207ENST00000560492 FANCIQ9NVI1 1328 aa13.28□□□□□ -0.28
CDC42BPB-207ENST00000560492 ZSWIM8A7E2V4 1837 aa13.27□□□□□ -0.28
CDC42BPB-207ENST00000560492 MYH13Q9UKX3 1938 aa13.27□□□□□ -0.28
CDC42BPB-207ENST00000560492 HIBADHP31937 336 aaKnown RBP13.27□□□□□ -0.29
CDC42BPB-207ENST00000560492 GTF2A2P52657 109 aa13.27□□□□□ -0.29
CDC42BPB-207ENST00000560492 DZIP1LQ8IYY4 767 aaKnown RBP13.27□□□□□ -0.29
CDC42BPB-207ENST00000560492 ARMC5Q96C12 935 aa13.27□□□□□ -0.29
CDC42BPB-207ENST00000560492 TMEM39BQ9GZU3 492 aa13.27□□□□□ -0.29
CDC42BPB-207ENST00000560492 SERPINA10Q9UK55 444 aa13.27□□□□□ -0.29
CDC42BPB-207ENST00000560492 IQSEC3Q9UPP2 1182 aaPredicted RBP13.27□□□□□ -0.29
CDC42BPB-207ENST00000560492 PTCH2Q9Y6C5 1203 aa13.27□□□□□ -0.29
CDC42BPB-207ENST00000560492 IRS2Q9Y4H2 1338 aa13.27□□□□□ -0.29
CDC42BPB-207ENST00000560492 GRM8O00222 908 aa13.26□□□□□ -0.29
CDC42BPB-207ENST00000560492 CRKP46108 304 aa13.26□□□□□ -0.29
CDC42BPB-207ENST00000560492 MAP3K9P80192 1104 aa13.26□□□□□ -0.29
CDC42BPB-207ENST00000560492 EXOSC9Q06265 439 aaKnown RBP13.26□□□□□ -0.29
CDC42BPB-207ENST00000560492 IL16Q14005 1332 aa13.26□□□□□ -0.29
CDC42BPB-207ENST00000560492 VGLL4Q14135 290 aa13.26□□□□□ -0.29
CDC42BPB-207ENST00000560492 CCDC27Q2M243 656 aa13.26□□□□□ -0.29
CDC42BPB-207ENST00000560492 CDAN1Q8IWY9 1227 aa13.26□□□□□ -0.29
CDC42BPB-207ENST00000560492 BRI3BPQ8WY22 251 aa13.26□□□□□ -0.29
CDC42BPB-207ENST00000560492 TMOD2Q9NZR1 351 aa13.26□□□□□ -0.29
CDC42BPB-207ENST00000560492 FAM205AQ6ZU69 1335 aa13.25□□□□□ -0.29
CDC42BPB-207ENST00000560492 TESPA1A2RU30 521 aaPredicted RBP13.25□□□□□ -0.29
CDC42BPB-207ENST00000560492 UBE4AQ14139 1066 aa13.25□□□□□ -0.29
CDC42BPB-207ENST00000560492 EPHA10Q5JZY3 1008 aa13.25□□□□□ -0.29
CDC42BPB-207ENST00000560492 BEND3Q5T5X7 828 aa13.25□□□□□ -0.29
CDC42BPB-207ENST00000560492 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.25□□□□□ -0.29
CDC42BPB-207ENST00000560492 ZNF333Q96JL9 665 aa13.25□□□□□ -0.29
CDC42BPB-207ENST00000560492 CACNB3P54284 484 aa13.24□□□□□ -0.29
CDC42BPB-207ENST00000560492 CCDC184Q52MB2 194 aa13.24□□□□□ -0.29
CDC42BPB-207ENST00000560492 FAM43AQ8N2R8 423 aa13.24□□□□□ -0.29
CDC42BPB-207ENST00000560492 TDRD7Q8NHU6 1098 aaKnown RBP13.24□□□□□ -0.29
CDC42BPB-207ENST00000560492 SH3TC2Q8TF17 1288 aa13.24□□□□□ -0.29
CDC42BPB-207ENST00000560492 MS4A4AQ96JQ5 239 aa13.24□□□□□ -0.29
CDC42BPB-207ENST00000560492 WRNIP1Q96S55 665 aa13.24□□□□□ -0.29
CDC42BPB-207ENST00000560492 VAMP4O75379 141 aa13.23□□□□□ -0.29
CDC42BPB-207ENST00000560492 CETPP11597 493 aa13.23□□□□□ -0.29
CDC42BPB-207ENST00000560492 CAP1Q01518 475 aa13.23□□□□□ -0.29
CDC42BPB-207ENST00000560492 CAVIN4Q5BKX8 364 aa13.23□□□□□ -0.29
CDC42BPB-207ENST00000560492 TEKT1Q969V4 418 aa13.23□□□□□ -0.29
CDC42BPB-207ENST00000560492 FAM84BQ96KN1 310 aaPredicted RBP13.23□□□□□ -0.29
CDC42BPB-207ENST00000560492 PUS3Q9BZE2 481 aaKnown RBP13.23□□□□□ -0.29
CDC42BPB-207ENST00000560492 BRCA2P51587 3418 aa13.23□□□□□ -0.29
CDC42BPB-207ENST00000560492 METTL24Q5JXM2 366 aa13.22□□□□□ -0.29
CDC42BPB-207ENST00000560492 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.22□□□□□ -0.29
CDC42BPB-207ENST00000560492 HOOK2Q96ED9 719 aa13.22□□□□□ -0.29
CDC42BPB-207ENST00000560492 TEPSINQ96N21 525 aa13.22□□□□□ -0.29
CDC42BPB-207ENST00000560492 SRCIN1Q9C0H9 1055 aa13.22□□□□□ -0.29
CDC42BPB-207ENST00000560492 MRS2Q9HD23 443 aa13.22□□□□□ -0.29
CDC42BPB-207ENST00000560492 COLQQ9Y215 455 aaPredicted RBP13.22□□□□□ -0.29
CDC42BPB-207ENST00000560492 MROH5Q6ZUA9 1318 aa13.21□□□□□ -0.29
CDC42BPB-207ENST00000560492 SPDYE5A6NIY4 337 aa13.21□□□□□ -0.29
CDC42BPB-207ENST00000560492 ZEB1P37275 1124 aaPredicted RBP13.21□□□□□ -0.29
CDC42BPB-207ENST00000560492 FXR1P51114 621 aaKnown RBP eCLIP13.21□□□□□ -0.29
CDC42BPB-207ENST00000560492 SNAPC2Q13487 334 aa13.21□□□□□ -0.29
CDC42BPB-207ENST00000560492 ERO1BQ86YB8 467 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms