RNA–Protein interactions for RNA: ENST00000560396.5

IDH3A-218, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 5

Gene IDH3A, Length 483 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-218ENST00000560396 IGF2BP3O00425 579 aaKnown RBP eCLIP17.4■□□□□ 0.38
IDH3A-218ENST00000560396 PDE8BO95263 885 aa17.4■□□□□ 0.38
IDH3A-218ENST00000560396 CHAF1AQ13111 956 aaPredicted RBP17.4■□□□□ 0.38
IDH3A-218ENST00000560396 TEKT1Q969V4 418 aa17.4■□□□□ 0.38
IDH3A-218ENST00000560396 AOX1Q06278 1338 aa17.4■□□□□ 0.38
IDH3A-218ENST00000560396 TESPA1A2RU30 521 aaPredicted RBP17.39■□□□□ 0.37
IDH3A-218ENST00000560396 E9PSI1 815 aa17.39■□□□□ 0.37
IDH3A-218ENST00000560396 LRRC24Q50LG9 513 aa17.39■□□□□ 0.37
IDH3A-218ENST00000560396 INTS3Q68E01 1043 aaKnown RBP17.39■□□□□ 0.37
IDH3A-218ENST00000560396 OPTNQ96CV9 577 aa17.39■□□□□ 0.37
IDH3A-218ENST00000560396 HOOK2Q96ED9 719 aa17.39■□□□□ 0.37
IDH3A-218ENST00000560396 MRIQ9BWK5 157 aa17.39■□□□□ 0.37
IDH3A-218ENST00000560396 TMOD2Q9NZR1 351 aa17.39■□□□□ 0.37
IDH3A-218ENST00000560396 IQSEC3Q9UPP2 1182 aaPredicted RBP17.39■□□□□ 0.37
IDH3A-218ENST00000560396 CSADQ9Y600 493 aa17.39■□□□□ 0.37
IDH3A-218ENST00000560396 MAST3O60307 1309 aa17.39■□□□□ 0.37
IDH3A-218ENST00000560396 ZNF521Q96K83 1311 aa17.39■□□□□ 0.37
IDH3A-218ENST00000560396 IFIT1P09914 478 aaKnown RBP17.38■□□□□ 0.37
IDH3A-218ENST00000560396 MAP3K9P80192 1104 aa17.38■□□□□ 0.37
IDH3A-218ENST00000560396 ARHGEF6Q15052 776 aa17.38■□□□□ 0.37
IDH3A-218ENST00000560396 TEPSINQ96N21 525 aa17.38■□□□□ 0.37
IDH3A-218ENST00000560396 ELP3Q9H9T3 547 aa17.38■□□□□ 0.37
IDH3A-218ENST00000560396 SUGT1Q9Y2Z0 365 aa17.38■□□□□ 0.37
IDH3A-218ENST00000560396 WDHD1O75717 1129 aaPredicted RBP17.37■□□□□ 0.37
IDH3A-218ENST00000560396 GJA5P36382 358 aa17.37■□□□□ 0.37
IDH3A-218ENST00000560396 GTF2A2P52657 109 aa17.37■□□□□ 0.37
IDH3A-218ENST00000560396 SP3Q02447 781 aa17.37■□□□□ 0.37
IDH3A-218ENST00000560396 CRHR2Q13324 411 aa17.37■□□□□ 0.37
IDH3A-218ENST00000560396 PRPF38BQ5VTL8 546 aaKnown RBP17.37■□□□□ 0.37
IDH3A-218ENST00000560396 OTOP1Q7RTM1 612 aa17.37■□□□□ 0.37
IDH3A-218ENST00000560396 ANKRD44Q8N8A2 993 aa17.37■□□□□ 0.37
IDH3A-218ENST00000560396 TMEM39BQ9GZU3 492 aa17.37■□□□□ 0.37
IDH3A-218ENST00000560396 USP44Q9H0E7 712 aa17.37■□□□□ 0.37
IDH3A-218ENST00000560396 BCAMP50895 628 aa17.36■□□□□ 0.37
IDH3A-218ENST00000560396 PUM3Q15397 648 aaKnown RBP17.36■□□□□ 0.37
IDH3A-218ENST00000560396 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.36■□□□□ 0.37
IDH3A-218ENST00000560396 VGLL2Q8N8G2 317 aa17.36■□□□□ 0.37
IDH3A-218ENST00000560396 KIF16BQ96L93 1317 aa17.36■□□□□ 0.37
IDH3A-218ENST00000560396 FKBP1CQ5VVH2 108 aa17.35■□□□□ 0.37
IDH3A-218ENST00000560396 FAM83AQ86UY5 434 aa17.35■□□□□ 0.37
IDH3A-218ENST00000560396 SSH1Q8WYL5 1049 aa17.35■□□□□ 0.37
IDH3A-218ENST00000560396 MS4A4AQ96JQ5 239 aa17.35■□□□□ 0.37
IDH3A-218ENST00000560396 ZDHHC15Q96MV8 337 aa17.35■□□□□ 0.37
IDH3A-218ENST00000560396 PTPN18Q99952 460 aa17.35■□□□□ 0.37
IDH3A-218ENST00000560396 EFCC1Q9HA90 598 aa17.35■□□□□ 0.37
IDH3A-218ENST00000560396 ZFYVE28Q9HCC9 887 aa17.35■□□□□ 0.37
IDH3A-218ENST00000560396 HDAC5Q9UQL6 1122 aa17.35■□□□□ 0.37
IDH3A-218ENST00000560396 LAMB1P07942 1786 aa17.35■□□□□ 0.37
IDH3A-218ENST00000560396 SLC5A1P13866 664 aa17.34■□□□□ 0.37
IDH3A-218ENST00000560396 VGLL4Q14135 290 aa17.34■□□□□ 0.37
IDH3A-218ENST00000560396 ALDH1L2Q3SY69 923 aa17.34■□□□□ 0.37
IDH3A-218ENST00000560396 HHIPL2Q6UWX4 724 aa17.34■□□□□ 0.37
IDH3A-218ENST00000560396 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.34■□□□□ 0.37
IDH3A-218ENST00000560396 KLHDC4Q8TBB5 520 aa17.34■□□□□ 0.37
IDH3A-218ENST00000560396 WDR66Q8TBY9 1149 aa17.34■□□□□ 0.37
IDH3A-218ENST00000560396 CD99L2Q8TCZ2 262 aa17.34■□□□□ 0.37
IDH3A-218ENST00000560396 PTPN22Q9Y2R2 807 aa17.34■□□□□ 0.37
IDH3A-218ENST00000560396 ARAP2Q8WZ64 1704 aa17.33■□□□□ 0.37
IDH3A-218ENST00000560396 CCL15-CCL14A0A0B4J2E2 113 aa17.33■□□□□ 0.36
IDH3A-218ENST00000560396 EYA2O00167 538 aa17.33■□□□□ 0.36
IDH3A-218ENST00000560396 FGFR2P21802 821 aa17.33■□□□□ 0.36
IDH3A-218ENST00000560396 SLFN5Q08AF3 891 aa17.33■□□□□ 0.36
IDH3A-218ENST00000560396 TAF1CQ15572 869 aaPredicted RBP17.33■□□□□ 0.36
IDH3A-218ENST00000560396 GRIK5Q16478 980 aa17.33■□□□□ 0.36
IDH3A-218ENST00000560396 CCL15Q16663 113 aa17.33■□□□□ 0.36
IDH3A-218ENST00000560396 DCAF15Q66K64 600 aa17.33■□□□□ 0.36
IDH3A-218ENST00000560396 LPIN2Q92539 896 aa17.33■□□□□ 0.36
IDH3A-218ENST00000560396 CETPP11597 493 aa17.32■□□□□ 0.36
IDH3A-218ENST00000560396 ERO1BQ86YB8 467 aa17.32■□□□□ 0.36
IDH3A-218ENST00000560396 CDAN1Q8IWY9 1227 aa17.32■□□□□ 0.36
IDH3A-218ENST00000560396 BRI3BPQ8WY22 251 aa17.32■□□□□ 0.36
IDH3A-218ENST00000560396 OTUD5Q96G74 571 aa17.32■□□□□ 0.36
IDH3A-218ENST00000560396 PCDH10Q9P2E7 1040 aa17.32■□□□□ 0.36
IDH3A-218ENST00000560396 FBXO3Q9UK99 471 aa17.32■□□□□ 0.36
IDH3A-218ENST00000560396 SPDYE5A6NIY4 337 aa17.31■□□□□ 0.36
IDH3A-218ENST00000560396 CACNB3P54284 484 aa17.31■□□□□ 0.36
IDH3A-218ENST00000560396 APOBEC3HQ6NTF7 200 aaKnown RBP17.31■□□□□ 0.36
IDH3A-218ENST00000560396 WRNIP1Q96S55 665 aa17.31■□□□□ 0.36
IDH3A-218ENST00000560396 SMC4Q9NTJ3 1288 aa17.31■□□□□ 0.36
IDH3A-218ENST00000560396 GNL3LQ9NVN8 582 aaKnown RBP17.31■□□□□ 0.36
IDH3A-218ENST00000560396 UBTFL1P0CB47 393 aaPredicted RBP17.3■□□□□ 0.36
IDH3A-218ENST00000560396 KIF22Q14807 665 aa17.3■□□□□ 0.36
IDH3A-218ENST00000560396 NBPF11Q86T75 865 aa17.3■□□□□ 0.36
IDH3A-218ENST00000560396 CNKSR2Q8WXI2 1034 aa17.3■□□□□ 0.36
IDH3A-218ENST00000560396 ZCCHC17Q9NP64 241 aaKnown RBP17.3■□□□□ 0.36
IDH3A-218ENST00000560396 CEP126Q9P2H0 1117 aa17.3■□□□□ 0.36
IDH3A-218ENST00000560396 TNRC18O15417 2968 aaPredicted RBP17.29■□□□□ 0.36
IDH3A-218ENST00000560396 RFX5P48382 616 aaPredicted RBP17.29■□□□□ 0.36
IDH3A-218ENST00000560396 SNAPC2Q13487 334 aa17.29■□□□□ 0.36
IDH3A-218ENST00000560396 TMEM106CQ9BVX2 250 aa17.29■□□□□ 0.36
IDH3A-218ENST00000560396 ZNF341Q9BYN7 854 aa17.29■□□□□ 0.36
IDH3A-218ENST00000560396 OTOFQ9HC10 1997 aa17.29■□□□□ 0.36
IDH3A-218ENST00000560396 CIAO1O76071 339 aa17.28■□□□□ 0.36
IDH3A-218ENST00000560396 CT47B1P0C2W7 299 aaPredicted RBP17.28■□□□□ 0.36
IDH3A-218ENST00000560396 FAM43AQ8N2R8 423 aa17.28■□□□□ 0.36
IDH3A-218ENST00000560396 FAM151AQ8WW52 585 aa17.28■□□□□ 0.36
IDH3A-218ENST00000560396 ARMC5Q96C12 935 aa17.28■□□□□ 0.36
IDH3A-218ENST00000560396 GCC1Q96CN9 775 aa17.28■□□□□ 0.36
IDH3A-218ENST00000560396 SNCAIPQ9Y6H5 919 aa17.28■□□□□ 0.36
IDH3A-218ENST00000560396 PPATQ06203 517 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms