RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 SMC1BQ8NDV3 1235 aa14.68□□□□□ -0.06
RABGGTA-215ENST00000560207 TEKT1Q969V4 418 aa14.68□□□□□ -0.06
RABGGTA-215ENST00000560207 PGAP2Q9UHJ9 254 aa14.68□□□□□ -0.06
RABGGTA-215ENST00000560207 AOX1Q06278 1338 aa14.67□□□□□ -0.06
RABGGTA-215ENST00000560207 PITPNM2Q9BZ72 1349 aa14.67□□□□□ -0.06
RABGGTA-215ENST00000560207 POLR2AP24928 1970 aaKnown RBP14.67□□□□□ -0.06
RABGGTA-215ENST00000560207 GLRX3O76003 335 aaKnown RBP14.67□□□□□ -0.06
RABGGTA-215ENST00000560207 MX1P20591 662 aa14.67□□□□□ -0.06
RABGGTA-215ENST00000560207 KIF4BQ2VIQ3 1234 aa14.67□□□□□ -0.06
RABGGTA-215ENST00000560207 DZIP1Q86YF9 867 aaKnown RBP14.67□□□□□ -0.06
RABGGTA-215ENST00000560207 LRP2BPQ9P2M1 347 aa14.67□□□□□ -0.06
RABGGTA-215ENST00000560207 ABCF2Q9UG63 623 aa14.67□□□□□ -0.06
RABGGTA-215ENST00000560207 SMARCA5O60264 1052 aaPredicted RBP14.66□□□□□ -0.06
RABGGTA-215ENST00000560207 MAP3K12Q12852 859 aa14.66□□□□□ -0.06
RABGGTA-215ENST00000560207 ZSCAN25Q6NSZ9 544 aa14.66□□□□□ -0.06
RABGGTA-215ENST00000560207 CHADLQ6NUI6 762 aa14.66□□□□□ -0.06
RABGGTA-215ENST00000560207 FAM163AQ96GL9 167 aaPredicted RBP14.66□□□□□ -0.06
RABGGTA-215ENST00000560207 CCDC136Q96JN2 1154 aa14.66□□□□□ -0.06
RABGGTA-215ENST00000560207 ZDHHC15Q96MV8 337 aa14.66□□□□□ -0.06
RABGGTA-215ENST00000560207 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.66□□□□□ -0.06
RABGGTA-215ENST00000560207 TLR7Q9NYK1 1049 aaKnown RBP14.66□□□□□ -0.06
RABGGTA-215ENST00000560207 STAP2Q9UGK3 403 aa14.66□□□□□ -0.06
RABGGTA-215ENST00000560207 CLEC11AQ9Y240 323 aa14.66□□□□□ -0.06
RABGGTA-215ENST00000560207 MYO5AQ9Y4I1 1855 aaKnown RBP14.65□□□□□ -0.06
RABGGTA-215ENST00000560207 COL1A1P02452 1464 aaPredicted RBP14.65□□□□□ -0.06
RABGGTA-215ENST00000560207 AK9Q5TCS8 1911 aa14.65□□□□□ -0.06
RABGGTA-215ENST00000560207 TNFAIP1Q13829 316 aa14.65□□□□□ -0.06
RABGGTA-215ENST00000560207 EAPPQ56P03 285 aaPredicted RBP14.65□□□□□ -0.06
RABGGTA-215ENST00000560207 DCPSQ96C86 337 aaKnown RBP14.65□□□□□ -0.06
RABGGTA-215ENST00000560207 HAUS7Q99871 368 aa14.65□□□□□ -0.06
RABGGTA-215ENST00000560207 NOL10Q9BSC4 688 aaKnown RBP14.65□□□□□ -0.06
RABGGTA-215ENST00000560207 PPP4R2Q9NY27 417 aa14.65□□□□□ -0.06
RABGGTA-215ENST00000560207 TRPM7Q96QT4 1865 aa14.64□□□□□ -0.07
RABGGTA-215ENST00000560207 CYP2E1P05181 493 aaPredicted RBP14.64□□□□□ -0.07
RABGGTA-215ENST00000560207 PLCG2P16885 1265 aa14.64□□□□□ -0.07
RABGGTA-215ENST00000560207 CRKP46108 304 aa14.64□□□□□ -0.07
RABGGTA-215ENST00000560207 RBM5P52756 815 aaKnown RBP eCLIP14.64□□□□□ -0.07
RABGGTA-215ENST00000560207 CFAP100Q494V2 611 aa14.64□□□□□ -0.07
RABGGTA-215ENST00000560207 FKBP1CQ5VVH2 108 aa14.64□□□□□ -0.07
RABGGTA-215ENST00000560207 CDC37L1Q7L3B6 337 aa14.64□□□□□ -0.07
RABGGTA-215ENST00000560207 SAMD7Q7Z3H4 446 aa14.64□□□□□ -0.07
RABGGTA-215ENST00000560207 APOBEC3FQ8IUX4 373 aaKnown RBP14.64□□□□□ -0.07
RABGGTA-215ENST00000560207 ZBED3Q96IU2 234 aaPredicted RBP14.64□□□□□ -0.07
RABGGTA-215ENST00000560207 OSBPL3Q9H4L5 887 aa14.64□□□□□ -0.07
RABGGTA-215ENST00000560207 PAG1Q9NWQ8 432 aa14.64□□□□□ -0.07
RABGGTA-215ENST00000560207 TMOD2Q9NZR1 351 aa14.64□□□□□ -0.07
RABGGTA-215ENST00000560207 RAI14Q9P0K7 980 aa14.64□□□□□ -0.07
RABGGTA-215ENST00000560207 SPDYE2BA6NHP3 402 aa14.63□□□□□ -0.07
RABGGTA-215ENST00000560207 F8W031 263 aaPredicted RBP14.63□□□□□ -0.07
RABGGTA-215ENST00000560207 WNT10BO00744 389 aa14.63□□□□□ -0.07
RABGGTA-215ENST00000560207 BAG3O95817 575 aa14.63□□□□□ -0.07
RABGGTA-215ENST00000560207 SPDYE6P0CI01 402 aa14.63□□□□□ -0.07
RABGGTA-215ENST00000560207 ZAP70P43403 619 aa14.63□□□□□ -0.07
RABGGTA-215ENST00000560207 TNNI2P48788 182 aa14.63□□□□□ -0.07
RABGGTA-215ENST00000560207 SCARF1Q14162 830 aa14.63□□□□□ -0.07
RABGGTA-215ENST00000560207 TBC1D10BQ4KMP7 808 aaPredicted RBP14.63□□□□□ -0.07
RABGGTA-215ENST00000560207 B4GALNT3Q6L9W6 998 aa14.63□□□□□ -0.07
RABGGTA-215ENST00000560207 MXD3Q9BW11 206 aa14.63□□□□□ -0.07
RABGGTA-215ENST00000560207 LNPKQ9C0E8 428 aa14.63□□□□□ -0.07
RABGGTA-215ENST00000560207 JAG2Q9Y219 1238 aa14.63□□□□□ -0.07
RABGGTA-215ENST00000560207 PPP2R3BQ9Y5P8 575 aa14.63□□□□□ -0.07
RABGGTA-215ENST00000560207 ZFYP08048 801 aaPredicted RBP14.62□□□□□ -0.07
RABGGTA-215ENST00000560207 PRDX5P30044 214 aa14.62□□□□□ -0.07
RABGGTA-215ENST00000560207 PDE1AP54750 535 aa14.62□□□□□ -0.07
RABGGTA-215ENST00000560207 RBM26Q5T8P6 1007 aaKnown RBP14.62□□□□□ -0.07
RABGGTA-215ENST00000560207 NAA16Q6N069 864 aaPredicted RBP14.62□□□□□ -0.07
RABGGTA-215ENST00000560207 SULF1Q8IWU6 871 aa14.62□□□□□ -0.07
RABGGTA-215ENST00000560207 NSUN4Q96CB9 384 aaKnown RBP14.62□□□□□ -0.07
RABGGTA-215ENST00000560207 SNRKQ9NRH2 765 aa14.62□□□□□ -0.07
RABGGTA-215ENST00000560207 GAKO14976 1311 aa14.62□□□□□ -0.07
RABGGTA-215ENST00000560207 SALL3Q9BXA9 1300 aa14.62□□□□□ -0.07
RABGGTA-215ENST00000560207 HIRAP54198 1017 aaPredicted RBP14.61□□□□□ -0.07
RABGGTA-215ENST00000560207 MECOMQ03112 1051 aa14.61□□□□□ -0.07
RABGGTA-215ENST00000560207 TRPM4Q8TD43 1214 aa14.61□□□□□ -0.07
RABGGTA-215ENST00000560207 HOOK2Q96ED9 719 aa14.61□□□□□ -0.07
RABGGTA-215ENST00000560207 DNAJC2Q99543 621 aaKnown RBP14.61□□□□□ -0.07
RABGGTA-215ENST00000560207 BCL11AQ9H165 835 aa14.61□□□□□ -0.07
RABGGTA-215ENST00000560207 BOLA2Q9H3K6 86 aa14.61□□□□□ -0.07
RABGGTA-215ENST00000560207 MROH7-TTC4A0A0A0MT08 1334 aa14.61□□□□□ -0.07
RABGGTA-215ENST00000560207 GPR75-ASB3A0A0A6YYF3 556 aa14.6□□□□□ -0.07
RABGGTA-215ENST00000560207 GOLIM4O00461 696 aa14.6□□□□□ -0.07
RABGGTA-215ENST00000560207 NPM3O75607 178 aaKnown RBP14.6□□□□□ -0.07
RABGGTA-215ENST00000560207 IDH1O75874 414 aaKnown RBP14.6□□□□□ -0.07
RABGGTA-215ENST00000560207 CNTROBQ8N137 903 aa14.6□□□□□ -0.07
RABGGTA-215ENST00000560207 PPP4CP60510 307 aa14.59□□□□□ -0.07
RABGGTA-215ENST00000560207 NBPF9Q3BBW0 867 aa14.59□□□□□ -0.07
RABGGTA-215ENST00000560207 SPDYE2Q495Y8 402 aa14.59□□□□□ -0.07
RABGGTA-215ENST00000560207 PI16Q6UXB8 463 aa14.59□□□□□ -0.07
RABGGTA-215ENST00000560207 TBC1D9Q6ZT07 1266 aa14.59□□□□□ -0.07
RABGGTA-215ENST00000560207 KRT26Q7Z3Y9 468 aa14.59□□□□□ -0.07
RABGGTA-215ENST00000560207 FAM83AQ86UY5 434 aa14.59□□□□□ -0.07
RABGGTA-215ENST00000560207 KBTBD3Q8NAB2 608 aa14.59□□□□□ -0.07
RABGGTA-215ENST00000560207 PI4K2BQ8TCG2 481 aa14.59□□□□□ -0.07
RABGGTA-215ENST00000560207 EVI5LQ96CN4 794 aa14.59□□□□□ -0.07
RABGGTA-215ENST00000560207 PRMT6Q96LA8 375 aaPredicted RBP14.59□□□□□ -0.07
RABGGTA-215ENST00000560207 DAGLAQ9Y4D2 1042 aa14.59□□□□□ -0.07
RABGGTA-215ENST00000560207 FOCADQ5VW36 1801 aa14.59□□□□□ -0.07
RABGGTA-215ENST00000560207 NF2P35240 595 aa14.58□□□□□ -0.08
RABGGTA-215ENST00000560207 UBE3CQ15386 1083 aa14.58□□□□□ -0.08
RABGGTA-215ENST00000560207 SLC9C2Q5TAH2 1124 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms