RNA–Protein interactions for RNA: ENST00000559849.5

CHRNB4-204, Transcript of cholinergic receptor nicotinic beta 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNB4, Length 2,080 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4-204ENST00000559849 CRKP46108 304 aa16.78■□□□□ 0.28
CHRNB4-204ENST00000559849 AAMPQ13685 434 aa16.78■□□□□ 0.28
CHRNB4-204ENST00000559849 CLASRPQ8N2M8 674 aaKnown RBP16.78■□□□□ 0.28
CHRNB4-204ENST00000559849 SPATA5Q8NB90 893 aa16.78■□□□□ 0.28
CHRNB4-204ENST00000559849 LDHBP07195 334 aaKnown RBP16.77■□□□□ 0.28
CHRNB4-204ENST00000559849 TTC39AQ5SRH9 613 aa16.77■□□□□ 0.28
CHRNB4-204ENST00000559849 CST9Q5W186 159 aa16.77■□□□□ 0.28
CHRNB4-204ENST00000559849 TEKT1Q969V4 418 aa16.77■□□□□ 0.28
CHRNB4-204ENST00000559849 IL1RAPL2Q9NP60 686 aa16.77■□□□□ 0.28
CHRNB4-204ENST00000559849 HMG20BQ9P0W2 317 aa16.77■□□□□ 0.28
CHRNB4-204ENST00000559849 DBNLQ9UJU6 430 aaKnown RBP16.77■□□□□ 0.28
CHRNB4-204ENST00000559849 PCDHB15Q9Y5E8 787 aa16.77■□□□□ 0.28
CHRNB4-204ENST00000559849 PCDHAC2Q9Y5I4 1007 aa16.77■□□□□ 0.28
CHRNB4-204ENST00000559849 ADM5C9JUS6 153 aa16.77■□□□□ 0.27
CHRNB4-204ENST00000559849 CELF2O95319 508 aaKnown RBP16.77■□□□□ 0.27
CHRNB4-204ENST00000559849 AACSQ86V21 672 aa16.77■□□□□ 0.27
CHRNB4-204ENST00000559849 ZNF512BQ96KM6 892 aaPredicted RBP16.77■□□□□ 0.27
CHRNB4-204ENST00000559849 PRDX5P30044 214 aa16.76■□□□□ 0.27
CHRNB4-204ENST00000559849 APOBEC3FQ8IUX4 373 aaKnown RBP16.76■□□□□ 0.27
CHRNB4-204ENST00000559849 DNAJC5GQ8N7S2 189 aa16.76■□□□□ 0.27
CHRNB4-204ENST00000559849 DCTPP1Q9H773 170 aa16.76■□□□□ 0.27
CHRNB4-204ENST00000559849 ABCF2Q9UG63 623 aa16.76■□□□□ 0.27
CHRNB4-204ENST00000559849 MCAMP43121 646 aa16.76■□□□□ 0.27
CHRNB4-204ENST00000559849 SPTY2D1Q68D10 685 aaPredicted RBP16.76■□□□□ 0.27
CHRNB4-204ENST00000559849 HHIPL2Q6UWX4 724 aa16.76■□□□□ 0.27
CHRNB4-204ENST00000559849 DLK2Q6UY11 383 aa16.76■□□□□ 0.27
CHRNB4-204ENST00000559849 ZDHHC15Q96MV8 337 aa16.76■□□□□ 0.27
CHRNB4-204ENST00000559849 ZNF408Q9H9D4 720 aa16.76■□□□□ 0.27
CHRNB4-204ENST00000559849 PCNTO95613 3336 aa16.75■□□□□ 0.27
CHRNB4-204ENST00000559849 ECM29Q5VYK3 1845 aa16.75■□□□□ 0.27
CHRNB4-204ENST00000559849 TLR7Q9NYK1 1049 aaKnown RBP16.75■□□□□ 0.27
CHRNB4-204ENST00000559849 LRRCC1Q9C099 1032 aa16.74■□□□□ 0.27
CHRNB4-204ENST00000559849 SCAF8Q9UPN6 1271 aaKnown RBP16.74■□□□□ 0.27
CHRNB4-204ENST00000559849 CLRN2A0PK11 232 aa16.74■□□□□ 0.27
CHRNB4-204ENST00000559849 IFIT2P09913 472 aaKnown RBP16.74■□□□□ 0.27
CHRNB4-204ENST00000559849 PI16Q6UXB8 463 aa16.74■□□□□ 0.27
CHRNB4-204ENST00000559849 CDCA5Q96FF9 252 aa16.74■□□□□ 0.27
CHRNB4-204ENST00000559849 TDRD3Q9H7E2 651 aaKnown RBP16.74■□□□□ 0.27
CHRNB4-204ENST00000559849 ABT1Q9ULW3 272 aaKnown RBP16.74■□□□□ 0.27
CHRNB4-204ENST00000559849 SPDYE2Q495Y8 402 aa16.73■□□□□ 0.27
CHRNB4-204ENST00000559849 DEFB129Q9H1M3 183 aa16.73■□□□□ 0.27
CHRNB4-204ENST00000559849 VEZTQ9HBM0 779 aa16.73■□□□□ 0.27
CHRNB4-204ENST00000559849 AKAP11Q9UKA4 1901 aa16.73■□□□□ 0.27
CHRNB4-204ENST00000559849 ERICH6Q7L0X2 663 aa16.73■□□□□ 0.27
CHRNB4-204ENST00000559849 SLF2Q8IX21 1173 aa16.73■□□□□ 0.27
CHRNB4-204ENST00000559849 KLRG1Q96E93 195 aa16.73■□□□□ 0.27
CHRNB4-204ENST00000559849 BCL11AQ9H165 835 aa16.73■□□□□ 0.27
CHRNB4-204ENST00000559849 SNRKQ9NRH2 765 aa16.73■□□□□ 0.27
CHRNB4-204ENST00000559849 ZNF70Q9UC06 446 aaPredicted RBP16.73■□□□□ 0.27
CHRNB4-204ENST00000559849 DIXDC1Q155Q3 683 aa16.72■□□□□ 0.27
CHRNB4-204ENST00000559849 DEFB115Q30KQ5 88 aa16.72■□□□□ 0.27
CHRNB4-204ENST00000559849 APOBEC3HQ6NTF7 200 aaKnown RBP16.72■□□□□ 0.27
CHRNB4-204ENST00000559849 TBC1D9Q6ZT07 1266 aa16.72■□□□□ 0.27
CHRNB4-204ENST00000559849 SAPCD2Q86UD0 394 aa16.72■□□□□ 0.27
CHRNB4-204ENST00000559849 DZIP1Q86YF9 867 aaKnown RBP16.72■□□□□ 0.27
CHRNB4-204ENST00000559849 C2orf69Q8N8R5 385 aa16.72■□□□□ 0.27
CHRNB4-204ENST00000559849 PPP2R3BQ9Y5P8 575 aa16.72■□□□□ 0.27
CHRNB4-204ENST00000559849 TLL2Q9Y6L7 1015 aa16.72■□□□□ 0.27
CHRNB4-204ENST00000559849 AOX1Q06278 1338 aa16.72■□□□□ 0.27
CHRNB4-204ENST00000559849 TNFAIP1Q13829 316 aa16.71■□□□□ 0.27
CHRNB4-204ENST00000559849 PRAMEF18Q5VWM3 479 aa16.71■□□□□ 0.27
CHRNB4-204ENST00000559849 LRP2BPQ9P2M1 347 aa16.71■□□□□ 0.27
CHRNB4-204ENST00000559849 MKRN1Q9UHC7 482 aaKnown RBP16.71■□□□□ 0.27
CHRNB4-204ENST00000559849 RASSF10A6NK89 507 aa16.71■□□□□ 0.27
CHRNB4-204ENST00000559849 NF2P35240 595 aa16.71■□□□□ 0.27
CHRNB4-204ENST00000559849 EXOC6Q8TAG9 804 aa16.71■□□□□ 0.27
CHRNB4-204ENST00000559849 GBA2Q9HCG7 927 aaPredicted RBP16.71■□□□□ 0.27
CHRNB4-204ENST00000559849 DAGLAQ9Y4D2 1042 aa16.71■□□□□ 0.27
CHRNB4-204ENST00000559849 MYH2Q9UKX2 1941 aa16.71■□□□□ 0.26
CHRNB4-204ENST00000559849 MECOMQ03112 1051 aa16.7■□□□□ 0.26
CHRNB4-204ENST00000559849 FAM163AQ96GL9 167 aaPredicted RBP16.7■□□□□ 0.26
CHRNB4-204ENST00000559849 IGSF3O75054 1194 aa16.69■□□□□ 0.26
CHRNB4-204ENST00000559849 CYP2E1P05181 493 aaPredicted RBP16.69■□□□□ 0.26
CHRNB4-204ENST00000559849 ZAP70P43403 619 aa16.69■□□□□ 0.26
CHRNB4-204ENST00000559849 TNNI2P48788 182 aa16.69■□□□□ 0.26
CHRNB4-204ENST00000559849 FKBP1BP68106 108 aa16.69■□□□□ 0.26
CHRNB4-204ENST00000559849 RASA3Q14644 834 aa16.69■□□□□ 0.26
CHRNB4-204ENST00000559849 TMOD2Q9NZR1 351 aa16.69■□□□□ 0.26
CHRNB4-204ENST00000559849 RAI14Q9P0K7 980 aa16.69■□□□□ 0.26
CHRNB4-204ENST00000559849 CNTNAP1P78357 1384 aa16.69■□□□□ 0.26
CHRNB4-204ENST00000559849 SMARCA5O60264 1052 aaPredicted RBP16.69■□□□□ 0.26
CHRNB4-204ENST00000559849 LDHCP07864 332 aa16.69■□□□□ 0.26
CHRNB4-204ENST00000559849 GSTO1P78417 241 aa16.69■□□□□ 0.26
CHRNB4-204ENST00000559849 HDAC1Q13547 482 aaPredicted RBP16.69■□□□□ 0.26
CHRNB4-204ENST00000559849 FKBP1CQ5VVH2 108 aa16.69■□□□□ 0.26
CHRNB4-204ENST00000559849 NSUN4Q96CB9 384 aaKnown RBP16.69■□□□□ 0.26
CHRNB4-204ENST00000559849 HHIPL1Q96JK4 782 aa16.69■□□□□ 0.26
CHRNB4-204ENST00000559849 GAKO14976 1311 aa16.68■□□□□ 0.26
CHRNB4-204ENST00000559849 TCP10L2B9ZVM9 353 aa16.68■□□□□ 0.26
CHRNB4-204ENST00000559849 HUNKP57058 714 aa16.68■□□□□ 0.26
CHRNB4-204ENST00000559849 SUPT20HL1Q3ZLR7 823 aa16.68■□□□□ 0.26
CHRNB4-204ENST00000559849 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.68■□□□□ 0.26
CHRNB4-204ENST00000559849 CDC42EP5Q6NZY7 148 aa16.67■□□□□ 0.26
CHRNB4-204ENST00000559849 ZNF384Q8TF68 577 aa16.67■□□□□ 0.26
CHRNB4-204ENST00000559849 CACNB3P54284 484 aa16.66■□□□□ 0.26
CHRNB4-204ENST00000559849 FAM83AQ86UY5 434 aa16.66■□□□□ 0.26
CHRNB4-204ENST00000559849 GCC1Q96CN9 775 aa16.66■□□□□ 0.26
CHRNB4-204ENST00000559849 USP40Q9NVE5 1235 aa16.66■□□□□ 0.26
CHRNB4-204ENST00000559849 MROH7-TTC4A0A0A0MT08 1334 aa16.66■□□□□ 0.26
CHRNB4-204ENST00000559849 ATP5JP18859 108 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms