RNA–Protein interactions for RNA: ENST00000559774.6

LRRC28-215, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-215ENST00000559774 ABCF2Q9UG63 623 aa10.53□□□□□ -0.72
LRRC28-215ENST00000559774 GJA3Q9Y6H8 435 aa10.53□□□□□ -0.72
LRRC28-215ENST00000559774 HIP1O00291 1037 aa10.52□□□□□ -0.73
LRRC28-215ENST00000559774 PRDX5P30044 214 aa10.52□□□□□ -0.73
LRRC28-215ENST00000559774 SCNN1DP51172 638 aa10.52□□□□□ -0.73
LRRC28-215ENST00000559774 DZIP1Q86YF9 867 aaKnown RBP10.52□□□□□ -0.73
LRRC28-215ENST00000559774 TEKT1Q969V4 418 aa10.52□□□□□ -0.73
LRRC28-215ENST00000559774 NSUN4Q96CB9 384 aaKnown RBP10.52□□□□□ -0.73
LRRC28-215ENST00000559774 PIH1D3Q9NQM4 214 aaKnown RBP10.52□□□□□ -0.73
LRRC28-215ENST00000559774 RAI14Q9P0K7 980 aa10.52□□□□□ -0.73
LRRC28-215ENST00000559774 CNOT7Q9UIV1 285 aaKnown RBP10.52□□□□□ -0.73
LRRC28-215ENST00000559774 TTF2Q9UNY4 1162 aaKnown RBP10.52□□□□□ -0.73
LRRC28-215ENST00000559774 IDH1O75874 414 aaKnown RBP10.51□□□□□ -0.73
LRRC28-215ENST00000559774 VEGFAP15692 232 aaPredicted RBP10.51□□□□□ -0.73
LRRC28-215ENST00000559774 MECOMQ03112 1051 aa10.51□□□□□ -0.73
LRRC28-215ENST00000559774 TSHZ3Q63HK5 1081 aa10.51□□□□□ -0.73
LRRC28-215ENST00000559774 NAA16Q6N069 864 aaPredicted RBP10.51□□□□□ -0.73
LRRC28-215ENST00000559774 TBC1D9Q6ZT07 1266 aa10.51□□□□□ -0.73
LRRC28-215ENST00000559774 USP50Q70EL3 339 aaPredicted RBP10.51□□□□□ -0.73
LRRC28-215ENST00000559774 PNMA8AQ86V59 439 aaPredicted RBP10.51□□□□□ -0.73
LRRC28-215ENST00000559774 KIAA0825Q8IV33 1275 aa10.51□□□□□ -0.73
LRRC28-215ENST00000559774 ZDHHC15Q96MV8 337 aa10.51□□□□□ -0.73
LRRC28-215ENST00000559774 ANTXR1Q9H6X2 564 aa10.51□□□□□ -0.73
LRRC28-215ENST00000559774 ADARB2Q9NS39 739 aaKnown RBP10.51□□□□□ -0.73
LRRC28-215ENST00000559774 HACL1Q9UJ83 578 aa10.51□□□□□ -0.73
LRRC28-215ENST00000559774 ZBTB12Q9Y330 459 aaPredicted RBP10.51□□□□□ -0.73
LRRC28-215ENST00000559774 GAKO14976 1311 aa10.51□□□□□ -0.73
LRRC28-215ENST00000559774 PSME4Q14997 1843 aa10.51□□□□□ -0.73
LRRC28-215ENST00000559774 TIAM2Q8IVF5 1701 aa10.5□□□□□ -0.73
LRRC28-215ENST00000559774 TRIM6-TRIM34B2RNG4 842 aa10.5□□□□□ -0.73
LRRC28-215ENST00000559774 BAG3O95817 575 aa10.5□□□□□ -0.73
LRRC28-215ENST00000559774 GSPT1P15170 499 aaKnown RBP10.5□□□□□ -0.73
LRRC28-215ENST00000559774 PLCG2P16885 1265 aa10.5□□□□□ -0.73
LRRC28-215ENST00000559774 ADD2P35612 726 aa10.5□□□□□ -0.73
LRRC28-215ENST00000559774 PPP4CP60510 307 aa10.5□□□□□ -0.73
LRRC28-215ENST00000559774 DLGAP5Q15398 846 aa10.5□□□□□ -0.73
LRRC28-215ENST00000559774 SLC9C2Q5TAH2 1124 aa10.5□□□□□ -0.73
LRRC28-215ENST00000559774 MICALL2Q8IY33 904 aa10.5□□□□□ -0.73
LRRC28-215ENST00000559774 ZC3H15Q8WU90 426 aaKnown RBP10.5□□□□□ -0.73
LRRC28-215ENST00000559774 ZBED3Q96IU2 234 aaPredicted RBP10.5□□□□□ -0.73
LRRC28-215ENST00000559774 MXD3Q9BW11 206 aa10.5□□□□□ -0.73
LRRC28-215ENST00000559774 MYOZ2Q9NPC6 264 aa10.5□□□□□ -0.73
LRRC28-215ENST00000559774 JAG2Q9Y219 1238 aa10.5□□□□□ -0.73
LRRC28-215ENST00000559774 SCN9AQ15858 1988 aa10.5□□□□□ -0.73
LRRC28-215ENST00000559774 CHD4Q14839 1912 aa10.49□□□□□ -0.73
LRRC28-215ENST00000559774 AKAP11Q9UKA4 1901 aa10.49□□□□□ -0.73
LRRC28-215ENST00000559774 GPR75-ASB3A0A0A6YYF3 556 aa10.49□□□□□ -0.73
LRRC28-215ENST00000559774 RNF113AO15541 343 aaKnown RBP10.49□□□□□ -0.73
LRRC28-215ENST00000559774 MYO1BO43795 1136 aa10.49□□□□□ -0.73
LRRC28-215ENST00000559774 PDE6AP16499 860 aa10.49□□□□□ -0.73
LRRC28-215ENST00000559774 SDSP20132 328 aa10.49□□□□□ -0.73
LRRC28-215ENST00000559774 CRKP46108 304 aa10.49□□□□□ -0.73
LRRC28-215ENST00000559774 RGS3P49796 1198 aa10.49□□□□□ -0.73
LRRC28-215ENST00000559774 GRIK5Q16478 980 aa10.49□□□□□ -0.73
LRRC28-215ENST00000559774 FKBP1CQ5VVH2 108 aa10.49□□□□□ -0.73
LRRC28-215ENST00000559774 MAGEB6Q8N7X4 407 aa10.49□□□□□ -0.73
LRRC28-215ENST00000559774 APPBP2Q92624 585 aa10.49□□□□□ -0.73
LRRC28-215ENST00000559774 NOL10Q9BSC4 688 aaKnown RBP10.49□□□□□ -0.73
LRRC28-215ENST00000559774 FSD1Q9BTV5 496 aa10.49□□□□□ -0.73
LRRC28-215ENST00000559774 NDUFB9Q9Y6M9 179 aa10.49□□□□□ -0.73
LRRC28-215ENST00000559774 MROH7-TTC4A0A0A0MT08 1334 aa10.49□□□□□ -0.73
LRRC28-215ENST00000559774 WDR90Q96KV7 1748 aa10.49□□□□□ -0.73
LRRC28-215ENST00000559774 TCRBV5S4A2TA0A5A2 114 aa10.48□□□□□ -0.73
LRRC28-215ENST00000559774 SPDYE2BA6NHP3 402 aa10.48□□□□□ -0.73
LRRC28-215ENST00000559774 POTECB2RU33 542 aa10.48□□□□□ -0.73
LRRC28-215ENST00000559774 NPM3O75607 178 aaKnown RBP10.48□□□□□ -0.73
LRRC28-215ENST00000559774 SPDYE6P0CI01 402 aa10.48□□□□□ -0.73
LRRC28-215ENST00000559774 CYP7A1P22680 504 aa10.48□□□□□ -0.73
LRRC28-215ENST00000559774 EPHX2P34913 555 aa10.48□□□□□ -0.73
LRRC28-215ENST00000559774 EPS15P42566 896 aa10.48□□□□□ -0.73
LRRC28-215ENST00000559774 CFAP100Q494V2 611 aa10.48□□□□□ -0.73
LRRC28-215ENST00000559774 APOBEC3HQ6NTF7 200 aaKnown RBP10.48□□□□□ -0.73
LRRC28-215ENST00000559774 ZNF384Q8TF68 577 aa10.48□□□□□ -0.73
LRRC28-215ENST00000559774 RILPL2Q969X0 211 aa10.48□□□□□ -0.73
LRRC28-215ENST00000559774 EDC3Q96F86 508 aaKnown RBP10.48□□□□□ -0.73
LRRC28-215ENST00000559774 TAF1DQ9H5J8 278 aaPredicted RBP10.48□□□□□ -0.73
LRRC28-215ENST00000559774 HELLSQ9NRZ9 838 aa10.48□□□□□ -0.73
LRRC28-215ENST00000559774 PGAP2Q9UHJ9 254 aa10.48□□□□□ -0.73
LRRC28-215ENST00000559774 DAGLAQ9Y4D2 1042 aa10.48□□□□□ -0.73
LRRC28-215ENST00000559774 CCDC88AQ3V6T2 1871 aa10.48□□□□□ -0.73
LRRC28-215ENST00000559774 ZNF646O15015 1829 aaPredicted RBP10.47□□□□□ -0.73
LRRC28-215ENST00000559774 F8W031 263 aaPredicted RBP10.47□□□□□ -0.73
LRRC28-215ENST00000559774 WNT10BO00744 389 aa10.47□□□□□ -0.73
LRRC28-215ENST00000559774 EIF5BO60841 1220 aaKnown RBP10.47□□□□□ -0.73
LRRC28-215ENST00000559774 YY1P25490 414 aa10.47□□□□□ -0.73
LRRC28-215ENST00000559774 RBM5P52756 815 aaKnown RBP eCLIP10.47□□□□□ -0.73
LRRC28-215ENST00000559774 MFAP1P55081 439 aaKnown RBP10.47□□□□□ -0.73
LRRC28-215ENST00000559774 DIXDC1Q155Q3 683 aa10.47□□□□□ -0.73
LRRC28-215ENST00000559774 KIF4BQ2VIQ3 1234 aa10.47□□□□□ -0.73
LRRC28-215ENST00000559774 ZMYM1Q5SVZ6 1142 aa10.47□□□□□ -0.73
LRRC28-215ENST00000559774 RUFY2Q8WXA3 655 aa10.47□□□□□ -0.73
LRRC28-215ENST00000559774 PITPNM2Q9BZ72 1349 aa10.47□□□□□ -0.73
LRRC28-215ENST00000559774 ZNF532Q9HCE3 1301 aa10.47□□□□□ -0.73
LRRC28-215ENST00000559774 GNAT2P19087 354 aa10.46□□□□□ -0.73
LRRC28-215ENST00000559774 TNFAIP1Q13829 316 aa10.46□□□□□ -0.73
LRRC28-215ENST00000559774 CASC1Q6TDU7 716 aa10.46□□□□□ -0.73
LRRC28-215ENST00000559774 SAMD7Q7Z3H4 446 aa10.46□□□□□ -0.73
LRRC28-215ENST00000559774 PRMT6Q96LA8 375 aaPredicted RBP10.46□□□□□ -0.73
LRRC28-215ENST00000559774 IDI2Q9BXS1 227 aa10.46□□□□□ -0.73
LRRC28-215ENST00000559774 RRAGCQ9HB90 399 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms