RNA–Protein interactions for RNA: ENST00000559670.5

LRRC49-218, Transcript of leucine rich repeat containing 49, humanhuman

TSL 4

Gene LRRC49, Length 527 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-218ENST00000559670 NBPF3Q9H094 633 aa9.66□□□□□ -0.86
LRRC49-218ENST00000559670 PRMT2P55345 433 aa9.65□□□□□ -0.86
LRRC49-218ENST00000559670 MAP3K11Q16584 847 aa9.65□□□□□ -0.86
LRRC49-218ENST00000559670 PROX2Q3B8N5 592 aa9.65□□□□□ -0.86
LRRC49-218ENST00000559670 WNT2BQ93097 391 aa9.65□□□□□ -0.86
LRRC49-218ENST00000559670 ZC3H12CQ9C0D7 883 aaKnown RBP9.65□□□□□ -0.86
LRRC49-218ENST00000559670 ZSWIM8A7E2V4 1837 aa9.65□□□□□ -0.86
LRRC49-218ENST00000559670 UNCXA6NJT0 531 aa9.64□□□□□ -0.87
LRRC49-218ENST00000559670 GOLGA8CPA6NN73 597 aa9.64□□□□□ -0.87
LRRC49-218ENST00000559670 GNRH1P01148 92 aa9.64□□□□□ -0.87
LRRC49-218ENST00000559670 HCLS1P14317 486 aaPredicted RBP9.64□□□□□ -0.87
LRRC49-218ENST00000559670 GPSM2P81274 684 aa9.64□□□□□ -0.87
LRRC49-218ENST00000559670 KIF22Q14807 665 aa9.64□□□□□ -0.87
LRRC49-218ENST00000559670 TDHQ8IZJ6 230 aa9.64□□□□□ -0.87
LRRC49-218ENST00000559670 CLMNQ96JQ2 1002 aa9.64□□□□□ -0.87
LRRC49-218ENST00000559670 GUCD1Q96NT3 240 aa9.64□□□□□ -0.87
LRRC49-218ENST00000559670 PTPN18Q99952 460 aa9.64□□□□□ -0.87
LRRC49-218ENST00000559670 ZFYVE28Q9HCC9 887 aa9.64□□□□□ -0.87
LRRC49-218ENST00000559670 ALPK3Q96L96 1907 aa9.64□□□□□ -0.87
LRRC49-218ENST00000559670 SSC5DA1L4H1 1573 aa9.63□□□□□ -0.87
LRRC49-218ENST00000559670 IRS2Q9Y4H2 1338 aa9.63□□□□□ -0.87
LRRC49-218ENST00000559670 SPDYE16A6NNV3 312 aaPredicted RBP9.63□□□□□ -0.87
LRRC49-218ENST00000559670 WNT10BO00744 389 aa9.63□□□□□ -0.87
LRRC49-218ENST00000559670 CCL5P13501 91 aa9.63□□□□□ -0.87
LRRC49-218ENST00000559670 TAF1CQ15572 869 aaPredicted RBP9.63□□□□□ -0.87
LRRC49-218ENST00000559670 APOBEC3FQ8IUX4 373 aaKnown RBP9.63□□□□□ -0.87
LRRC49-218ENST00000559670 TBC1D16Q8TBP0 767 aa9.63□□□□□ -0.87
LRRC49-218ENST00000559670 RABGEF1Q9UJ41 708 aa9.63□□□□□ -0.87
LRRC49-218ENST00000559670 FZD1Q9UP38 647 aa9.63□□□□□ -0.87
LRRC49-218ENST00000559670 RRP7AQ9Y3A4 280 aaKnown RBP9.63□□□□□ -0.87
LRRC49-218ENST00000559670 COL1A1P02452 1464 aaPredicted RBP9.63□□□□□ -0.87
LRRC49-218ENST00000559670 TNFRSF10AO00220 468 aa9.62□□□□□ -0.87
LRRC49-218ENST00000559670 PPP1R12BO60237 982 aaPredicted RBP9.62□□□□□ -0.87
LRRC49-218ENST00000559670 DIAPH1O60610 1272 aaKnown RBP9.62□□□□□ -0.87
LRRC49-218ENST00000559670 GJA5P36382 358 aa9.62□□□□□ -0.87
LRRC49-218ENST00000559670 FAM109BQ6ICB4 259 aaPredicted RBP9.62□□□□□ -0.87
LRRC49-218ENST00000559670 U2AF1L4Q8WU68 220 aaKnown RBP9.62□□□□□ -0.87
LRRC49-218ENST00000559670 ARHGAP39Q9C0H5 1083 aa9.62□□□□□ -0.87
LRRC49-218ENST00000559670 RNF208Q9H0X6 261 aa9.62□□□□□ -0.87
LRRC49-218ENST00000559670 TMEM265A0A087WTH1 108 aa9.61□□□□□ -0.87
LRRC49-218ENST00000559670 MYL6BP14649 208 aa9.61□□□□□ -0.87
LRRC49-218ENST00000559670 GRK4P32298 578 aa9.61□□□□□ -0.87
LRRC49-218ENST00000559670 LACTBP83111 547 aaPredicted RBP9.61□□□□□ -0.87
LRRC49-218ENST00000559670 OGFOD1Q8N543 542 aa9.61□□□□□ -0.87
LRRC49-218ENST00000559670 EPAS1Q99814 870 aa9.61□□□□□ -0.87
LRRC49-218ENST00000559670 POLR3GLQ9BT43 218 aa9.61□□□□□ -0.87
LRRC49-218ENST00000559670 USP17L3A6NCW0 530 aa9.6□□□□□ -0.87
LRRC49-218ENST00000559670 USP17L4A6NCW7 530 aa9.6□□□□□ -0.87
LRRC49-218ENST00000559670 WDHD1O75717 1129 aaPredicted RBP9.6□□□□□ -0.87
LRRC49-218ENST00000559670 SASH1O94885 1247 aa9.6□□□□□ -0.87
LRRC49-218ENST00000559670 CAPN2P17655 700 aa9.6□□□□□ -0.87
LRRC49-218ENST00000559670 UBXN2AP68543 259 aa9.6□□□□□ -0.87
LRRC49-218ENST00000559670 USP17L1Q7RTZ2 530 aa9.6□□□□□ -0.87
LRRC49-218ENST00000559670 MAFAQ8NHW3 353 aaPredicted RBP9.6□□□□□ -0.87
LRRC49-218ENST00000559670 CELF1Q92879 486 aaKnown RBP9.6□□□□□ -0.87
LRRC49-218ENST00000559670 ZMYND8Q9ULU4 1186 aaPredicted RBP9.6□□□□□ -0.87
LRRC49-218ENST00000559670 SH3TC1Q8TE82 1336 aa9.59□□□□□ -0.87
LRRC49-218ENST00000559670 MUC3AQ02505 3323 aa9.59□□□□□ -0.87
LRRC49-218ENST00000559670 UFL1O94874 794 aa9.59□□□□□ -0.87
LRRC49-218ENST00000559670 SGPL1O95470 568 aa9.59□□□□□ -0.87
LRRC49-218ENST00000559670 MLLT3P42568 568 aaPredicted RBP9.59□□□□□ -0.87
LRRC49-218ENST00000559670 MAGEA10P43363 369 aaPredicted RBP9.59□□□□□ -0.87
LRRC49-218ENST00000559670 IREB2P48200 963 aaKnown RBP9.59□□□□□ -0.87
LRRC49-218ENST00000559670 MAP3K12Q12852 859 aa9.59□□□□□ -0.87
LRRC49-218ENST00000559670 PDIA6Q15084 440 aa9.59□□□□□ -0.87
LRRC49-218ENST00000559670 C6orf132Q5T0Z8 1188 aa9.59□□□□□ -0.87
LRRC49-218ENST00000559670 C7orf61Q8IZ16 206 aa9.59□□□□□ -0.87
LRRC49-218ENST00000559670 RAET1EQ8TD07 263 aa9.59□□□□□ -0.87
LRRC49-218ENST00000559670 TRIM47Q96LD4 638 aa9.59□□□□□ -0.87
LRRC49-218ENST00000559670 UBE2OQ9C0C9 1292 aaKnown RBP9.59□□□□□ -0.87
LRRC49-218ENST00000559670 PANK3Q9H999 370 aa9.59□□□□□ -0.87
LRRC49-218ENST00000559670 PODXL2Q9NZ53 605 aa9.59□□□□□ -0.87
LRRC49-218ENST00000559670 BIN2Q9UBW5 565 aaPredicted RBP9.59□□□□□ -0.87
LRRC49-218ENST00000559670 SRRDQ9UH36 339 aa9.59□□□□□ -0.87
LRRC49-218ENST00000559670 TRMT112Q9UI30 125 aaKnown RBP9.59□□□□□ -0.87
LRRC49-218ENST00000559670 RIPOR2Q9Y4F9 1068 aa9.59□□□□□ -0.87
LRRC49-218ENST00000559670 SYNGAP1Q96PV0 1343 aa9.58□□□□□ -0.88
LRRC49-218ENST00000559670 COL4A1P02462 1669 aa9.58□□□□□ -0.88
LRRC49-218ENST00000559670 OTOFQ9HC10 1997 aa9.58□□□□□ -0.88
LRRC49-218ENST00000559670 CCL15-CCL14A0A0B4J2E2 113 aa9.58□□□□□ -0.88
LRRC49-218ENST00000559670 TLR2O60603 784 aa9.58□□□□□ -0.88
LRRC49-218ENST00000559670 MMP14P50281 582 aa9.58□□□□□ -0.88
LRRC49-218ENST00000559670 CCL15Q16663 113 aa9.58□□□□□ -0.88
LRRC49-218ENST00000559670 PODNQ7Z5L7 613 aa9.58□□□□□ -0.88
LRRC49-218ENST00000559670 NLRP10Q86W26 655 aa9.58□□□□□ -0.88
LRRC49-218ENST00000559670 ANKRD13AQ8IZ07 590 aa9.58□□□□□ -0.88
LRRC49-218ENST00000559670 BRI3BPQ8WY22 251 aa9.58□□□□□ -0.88
LRRC49-218ENST00000559670 RTF1Q92541 710 aaKnown RBP9.58□□□□□ -0.88
LRRC49-218ENST00000559670 DDX12PQ92771 950 aa9.58□□□□□ -0.88
LRRC49-218ENST00000559670 SNX27Q96L92 541 aa9.58□□□□□ -0.88
LRRC49-218ENST00000559670 FAM161BQ96MY7 647 aa9.58□□□□□ -0.88
LRRC49-218ENST00000559670 DEFB129Q9H1M3 183 aa9.58□□□□□ -0.88
LRRC49-218ENST00000559670 GGA1Q9UJY5 639 aa9.58□□□□□ -0.88
LRRC49-218ENST00000559670 MYO3BQ8WXR4 1341 aa9.57□□□□□ -0.88
LRRC49-218ENST00000559670 HOXD10P28358 340 aa9.57□□□□□ -0.88
LRRC49-218ENST00000559670 HSP90AB3PQ58FF7 597 aa9.57□□□□□ -0.88
LRRC49-218ENST00000559670 TJAP1Q5JTD0 557 aa9.57□□□□□ -0.88
LRRC49-218ENST00000559670 ZNF697Q5TEC3 545 aa9.57□□□□□ -0.88
LRRC49-218ENST00000559670 MCM10Q7L590 875 aa9.57□□□□□ -0.88
LRRC49-218ENST00000559670 FAM43AQ8N2R8 423 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms