RNA–Protein interactions for RNA: ENST00000559566.5

SHF-205, Transcript of Src homology 2 domain containing F, humanhuman

TSL 1 (best)

Gene SHF, Length 884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-205ENST00000559566 TTC39AQ5SRH9 613 aa23.95■■□□□ 1.42
SHF-205ENST00000559566 KRT26Q7Z3Y9 468 aa23.95■■□□□ 1.42
SHF-205ENST00000559566 UQCRFS1P1P0C7P4 283 aa23.94■■□□□ 1.42
SHF-205ENST00000559566 TBC1D9Q6ZT07 1266 aa23.94■■□□□ 1.42
SHF-205ENST00000559566 CDC37L1Q7L3B6 337 aa23.94■■□□□ 1.42
SHF-205ENST00000559566 DCPSQ96C86 337 aaKnown RBP23.94■■□□□ 1.42
SHF-205ENST00000559566 SERPINA10Q9UK55 444 aa23.94■■□□□ 1.42
SHF-205ENST00000559566 MYH13Q9UKX3 1938 aa23.94■■□□□ 1.42
SHF-205ENST00000559566 CLRN2A0PK11 232 aa23.93■■□□□ 1.42
SHF-205ENST00000559566 RBM5P52756 815 aaKnown RBP eCLIP23.93■■□□□ 1.42
SHF-205ENST00000559566 DIXDC1Q155Q3 683 aa23.93■■□□□ 1.42
SHF-205ENST00000559566 CCDC158Q5M9N0 1113 aa23.93■■□□□ 1.42
SHF-205ENST00000559566 CST9Q5W186 159 aa23.93■■□□□ 1.42
SHF-205ENST00000559566 CLASRPQ8N2M8 674 aaKnown RBP23.93■■□□□ 1.42
SHF-205ENST00000559566 ZNF512BQ96KM6 892 aaPredicted RBP23.93■■□□□ 1.42
SHF-205ENST00000559566 LRRCC1Q9C099 1032 aa23.93■■□□□ 1.42
SHF-205ENST00000559566 SUGT1Q9Y2Z0 365 aa23.93■■□□□ 1.42
SHF-205ENST00000559566 NDUFB9Q9Y6M9 179 aa23.93■■□□□ 1.42
SHF-205ENST00000559566 PITPNM2Q9BZ72 1349 aa23.92■■□□□ 1.42
SHF-205ENST00000559566 ZNF384Q8TF68 577 aa23.92■■□□□ 1.42
SHF-205ENST00000559566 ABCF2Q9UG63 623 aa23.92■■□□□ 1.42
SHF-205ENST00000559566 LDHBP07195 334 aaKnown RBP23.91■■□□□ 1.42
SHF-205ENST00000559566 ZAP70P43403 619 aa23.91■■□□□ 1.42
SHF-205ENST00000559566 PRAMEF18Q5VWM3 479 aa23.91■■□□□ 1.42
SHF-205ENST00000559566 HDLBPQ00341 1268 aaKnown RBP23.9■■□□□ 1.42
SHF-205ENST00000559566 HDAC1Q13547 482 aaPredicted RBP23.9■■□□□ 1.42
SHF-205ENST00000559566 APOBEC3HQ6NTF7 200 aaKnown RBP23.9■■□□□ 1.42
SHF-205ENST00000559566 SULF1Q8IWU6 871 aa23.9■■□□□ 1.42
SHF-205ENST00000559566 TDRD3Q9H7E2 651 aaKnown RBP23.9■■□□□ 1.42
SHF-205ENST00000559566 CYP2E1P05181 493 aaPredicted RBP23.89■■□□□ 1.41
SHF-205ENST00000559566 IFIT2P09913 472 aaKnown RBP23.89■■□□□ 1.41
SHF-205ENST00000559566 TEKT1Q969V4 418 aa23.89■■□□□ 1.41
SHF-205ENST00000559566 ZDHHC15Q96MV8 337 aa23.89■■□□□ 1.41
SHF-205ENST00000559566 DAGLAQ9Y4D2 1042 aa23.89■■□□□ 1.41
SHF-205ENST00000559566 MAST3O60307 1309 aa23.88■■□□□ 1.41
SHF-205ENST00000559566 CELF2O95319 508 aaKnown RBP23.88■■□□□ 1.41
SHF-205ENST00000559566 IGHDP01880 384 aa23.88■■□□□ 1.41
SHF-205ENST00000559566 AAMPQ13685 434 aa23.88■■□□□ 1.41
SHF-205ENST00000559566 SPDYE2Q495Y8 402 aa23.88■■□□□ 1.41
SHF-205ENST00000559566 CDCA5Q96FF9 252 aa23.88■■□□□ 1.41
SHF-205ENST00000559566 MRIQ9BWK5 157 aa23.88■■□□□ 1.41
SHF-205ENST00000559566 ZNF408Q9H9D4 720 aa23.88■■□□□ 1.41
SHF-205ENST00000559566 PIH1D3Q9NQM4 214 aaKnown RBP23.88■■□□□ 1.41
SHF-205ENST00000559566 ZNF70Q9UC06 446 aaPredicted RBP23.88■■□□□ 1.41
SHF-205ENST00000559566 AKAP11Q9UKA4 1901 aa23.88■■□□□ 1.41
SHF-205ENST00000559566 TMEM88BA6NKF7 163 aa23.87■■□□□ 1.41
SHF-205ENST00000559566 MECOMQ03112 1051 aa23.87■■□□□ 1.41
SHF-205ENST00000559566 HHIPL2Q6UWX4 724 aa23.87■■□□□ 1.41
SHF-205ENST00000559566 ZGPATQ8N5A5 531 aaKnown RBP23.87■■□□□ 1.41
SHF-205ENST00000559566 ANTXR1Q9H6X2 564 aa23.87■■□□□ 1.41
SHF-205ENST00000559566 CREBZFQ9NS37 354 aa23.87■■□□□ 1.41
SHF-205ENST00000559566 CACNB3P54284 484 aa23.86■■□□□ 1.41
SHF-205ENST00000559566 ERICH6Q7L0X2 663 aa23.86■■□□□ 1.41
SHF-205ENST00000559566 VEZTQ9HBM0 779 aa23.86■■□□□ 1.41
SHF-205ENST00000559566 POLR2AP24928 1970 aaKnown RBP23.85■■□□□ 1.41
SHF-205ENST00000559566 DZIP1Q86YF9 867 aaKnown RBP23.85■■□□□ 1.41
SHF-205ENST00000559566 APOBEC3FQ8IUX4 373 aaKnown RBP23.85■■□□□ 1.41
SHF-205ENST00000559566 OTUD7AQ8TE49 926 aaPredicted RBP23.85■■□□□ 1.41
SHF-205ENST00000559566 GAKO14976 1311 aa23.84■■□□□ 1.41
SHF-205ENST00000559566 DNAJC5GQ8N7S2 189 aa23.84■■□□□ 1.41
SHF-205ENST00000559566 NSUN4Q96CB9 384 aaKnown RBP23.84■■□□□ 1.41
SHF-205ENST00000559566 MYO1BO43795 1136 aa23.83■■□□□ 1.41
SHF-205ENST00000559566 TSHZ3Q63HK5 1081 aa23.83■■□□□ 1.41
SHF-205ENST00000559566 SPTY2D1Q68D10 685 aaPredicted RBP23.83■■□□□ 1.41
SHF-205ENST00000559566 CDAN1Q8IWY9 1227 aa23.83■■□□□ 1.41
SHF-205ENST00000559566 EDC3Q96F86 508 aaKnown RBP23.83■■□□□ 1.41
SHF-205ENST00000559566 DEFB129Q9H1M3 183 aa23.83■■□□□ 1.41
SHF-205ENST00000559566 RAI14Q9P0K7 980 aa23.83■■□□□ 1.41
SHF-205ENST00000559566 TCP10L2B9ZVM9 353 aa23.82■■□□□ 1.4
SHF-205ENST00000559566 CDC42EP5Q6NZY7 148 aa23.82■■□□□ 1.4
SHF-205ENST00000559566 LRP2BPQ9P2M1 347 aa23.82■■□□□ 1.4
SHF-205ENST00000559566 CNTNAP1P78357 1384 aa23.81■■□□□ 1.4
SHF-205ENST00000559566 ATP5JP18859 108 aa23.81■■□□□ 1.4
SHF-205ENST00000559566 RASA3Q14644 834 aa23.81■■□□□ 1.4
SHF-205ENST00000559566 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.81■■□□□ 1.4
SHF-205ENST00000559566 FAM163AQ96GL9 167 aaPredicted RBP23.81■■□□□ 1.4
SHF-205ENST00000559566 BOLA2Q9H3K6 86 aa23.81■■□□□ 1.4
SHF-205ENST00000559566 ECM29Q5VYK3 1845 aa23.81■■□□□ 1.4
SHF-205ENST00000559566 SSC5DA1L4H1 1573 aa23.81■■□□□ 1.4
SHF-205ENST00000559566 MROH7-TTC4A0A0A0MT08 1334 aa23.81■■□□□ 1.4
SHF-205ENST00000559566 ANKRD45Q5TZF3 282 aa23.8■■□□□ 1.4
SHF-205ENST00000559566 MOB2Q70IA6 237 aa23.8■■□□□ 1.4
SHF-205ENST00000559566 ADGRA1Q86SQ6 560 aa23.8■■□□□ 1.4
SHF-205ENST00000559566 SMC5Q8IY18 1101 aa23.8■■□□□ 1.4
SHF-205ENST00000559566 GCC1Q96CN9 775 aa23.8■■□□□ 1.4
SHF-205ENST00000559566 TRPM7Q96QT4 1865 aa23.8■■□□□ 1.4
SHF-205ENST00000559566 DNAJC2Q99543 621 aaKnown RBP23.8■■□□□ 1.4
SHF-205ENST00000559566 MKRN1Q9UHC7 482 aaKnown RBP23.8■■□□□ 1.4
SHF-205ENST00000559566 CEP350Q5VT06 3117 aa23.8■■□□□ 1.4
SHF-205ENST00000559566 BTDP43251 543 aa23.79■■□□□ 1.4
SHF-205ENST00000559566 NFIAQ12857 509 aa23.79■■□□□ 1.4
SHF-205ENST00000559566 RWDD1Q9H446 243 aaPredicted RBP23.79■■□□□ 1.4
SHF-205ENST00000559566 ABT1Q9ULW3 272 aaKnown RBP23.79■■□□□ 1.4
SHF-205ENST00000559566 FZD1Q9UP38 647 aa23.79■■□□□ 1.4
SHF-205ENST00000559566 TLL2Q9Y6L7 1015 aa23.79■■□□□ 1.4
SHF-205ENST00000559566 SALL3Q9BXA9 1300 aa23.79■■□□□ 1.4
SHF-205ENST00000559566 SAPCD2Q86UD0 394 aa23.78■■□□□ 1.4
SHF-205ENST00000559566 TEPSINQ96N21 525 aa23.78■■□□□ 1.4
SHF-205ENST00000559566 TMEM39BQ9GZU3 492 aa23.78■■□□□ 1.4
SHF-205ENST00000559566 GBA2Q9HCG7 927 aaPredicted RBP23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms