RNA–Protein interactions for RNA: ENST00000559229.1

IRF9-204, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-204ENST00000559229 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.17■□□□□ 0.66
IRF9-204ENST00000559229 HDLBPQ00341 1268 aaKnown RBP19.16■□□□□ 0.66
IRF9-204ENST00000559229 VGLL2Q8N8G2 317 aa19.16■□□□□ 0.66
IRF9-204ENST00000559229 TBC1D22AQ8WUA7 517 aa19.16■□□□□ 0.66
IRF9-204ENST00000559229 IGF2BP3O00425 579 aaKnown RBP eCLIP19.15■□□□□ 0.66
IRF9-204ENST00000559229 FRAT2O75474 233 aaPredicted RBP19.15■□□□□ 0.66
IRF9-204ENST00000559229 SLFN5Q08AF3 891 aa19.15■□□□□ 0.66
IRF9-204ENST00000559229 TEPSINQ96N21 525 aa19.15■□□□□ 0.66
IRF9-204ENST00000559229 GJA5P36382 358 aa19.14■□□□□ 0.65
IRF9-204ENST00000559229 TNNI2P48788 182 aa19.14■□□□□ 0.65
IRF9-204ENST00000559229 GRIK5Q16478 980 aa19.14■□□□□ 0.65
IRF9-204ENST00000559229 OTUD7BQ6GQQ9 843 aa19.14■□□□□ 0.65
IRF9-204ENST00000559229 MRIQ9BWK5 157 aa19.14■□□□□ 0.65
IRF9-204ENST00000559229 IQSEC3Q9UPP2 1182 aaPredicted RBP19.14■□□□□ 0.65
IRF9-204ENST00000559229 HTTP42858 3142 aa19.14■□□□□ 0.65
IRF9-204ENST00000559229 ECM29Q5VYK3 1845 aa19.14■□□□□ 0.65
IRF9-204ENST00000559229 TESPA1A2RU30 521 aaPredicted RBP19.13■□□□□ 0.65
IRF9-204ENST00000559229 TCP10L2B9ZVM9 353 aa19.13■□□□□ 0.65
IRF9-204ENST00000559229 BCAMP50895 628 aa19.13■□□□□ 0.65
IRF9-204ENST00000559229 CHAF1AQ13111 956 aaPredicted RBP19.13■□□□□ 0.65
IRF9-204ENST00000559229 ALDH1L2Q3SY69 923 aa19.13■□□□□ 0.65
IRF9-204ENST00000559229 KLHDC4Q8TBB5 520 aa19.13■□□□□ 0.65
IRF9-204ENST00000559229 KIF16BQ96L93 1317 aa19.12■□□□□ 0.65
IRF9-204ENST00000559229 TMEM39BQ9GZU3 492 aa19.12■□□□□ 0.65
IRF9-204ENST00000559229 SUGT1Q9Y2Z0 365 aa19.12■□□□□ 0.65
IRF9-204ENST00000559229 CENPFP49454 3210 aa19.11■□□□□ 0.65
IRF9-204ENST00000559229 IFIT1P09914 478 aaKnown RBP19.11■□□□□ 0.65
IRF9-204ENST00000559229 FGFR2P21802 821 aa19.11■□□□□ 0.65
IRF9-204ENST00000559229 PUM3Q15397 648 aaKnown RBP19.11■□□□□ 0.65
IRF9-204ENST00000559229 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.11■□□□□ 0.65
IRF9-204ENST00000559229 CDAN1Q8IWY9 1227 aa19.11■□□□□ 0.65
IRF9-204ENST00000559229 TEKT1Q969V4 418 aa19.11■□□□□ 0.65
IRF9-204ENST00000559229 OPTNQ96CV9 577 aa19.11■□□□□ 0.65
IRF9-204ENST00000559229 PTPN18Q99952 460 aa19.11■□□□□ 0.65
IRF9-204ENST00000559229 ELP3Q9H9T3 547 aa19.11■□□□□ 0.65
IRF9-204ENST00000559229 RFX5P48382 616 aaPredicted RBP19.1■□□□□ 0.65
IRF9-204ENST00000559229 MAP3K9P80192 1104 aa19.1■□□□□ 0.65
IRF9-204ENST00000559229 MS4A4AQ96JQ5 239 aa19.1■□□□□ 0.65
IRF9-204ENST00000559229 ZDHHC15Q96MV8 337 aa19.1■□□□□ 0.65
IRF9-204ENST00000559229 EYA2O00167 538 aa19.09■□□□□ 0.65
IRF9-204ENST00000559229 CRHR2Q13324 411 aa19.09■□□□□ 0.65
IRF9-204ENST00000559229 OTOP1Q7RTM1 612 aa19.09■□□□□ 0.65
IRF9-204ENST00000559229 TRMT2AQ8IZ69 625 aaKnown RBP19.09■□□□□ 0.65
IRF9-204ENST00000559229 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.09■□□□□ 0.65
IRF9-204ENST00000559229 CDCA7LQ96GN5 454 aa19.09■□□□□ 0.65
IRF9-204ENST00000559229 TRIM17Q9Y577 477 aa19.09■□□□□ 0.65
IRF9-204ENST00000559229 MAST3O60307 1309 aa19.08■□□□□ 0.65
IRF9-204ENST00000559229 VGLL4Q14135 290 aa19.08■□□□□ 0.64
IRF9-204ENST00000559229 FKBP1CQ5VVH2 108 aa19.08■□□□□ 0.64
IRF9-204ENST00000559229 APOBEC3HQ6NTF7 200 aaKnown RBP19.08■□□□□ 0.64
IRF9-204ENST00000559229 FAM83AQ86UY5 434 aa19.08■□□□□ 0.64
IRF9-204ENST00000559229 LPIN2Q92539 896 aa19.08■□□□□ 0.64
IRF9-204ENST00000559229 ERO1AQ96HE7 468 aa19.08■□□□□ 0.64
IRF9-204ENST00000559229 SMC4Q9NTJ3 1288 aa19.08■□□□□ 0.64
IRF9-204ENST00000559229 SLC5A1P13866 664 aa19.07■□□□□ 0.64
IRF9-204ENST00000559229 CACNB3P54284 484 aa19.07■□□□□ 0.64
IRF9-204ENST00000559229 PRPF38BQ5VTL8 546 aaKnown RBP19.07■□□□□ 0.64
IRF9-204ENST00000559229 HHIPL2Q6UWX4 724 aa19.07■□□□□ 0.64
IRF9-204ENST00000559229 WDR66Q8TBY9 1149 aa19.07■□□□□ 0.64
IRF9-204ENST00000559229 TMOD2Q9NZR1 351 aa19.07■□□□□ 0.64
IRF9-204ENST00000559229 FBXO3Q9UK99 471 aa19.07■□□□□ 0.64
IRF9-204ENST00000559229 CSADQ9Y600 493 aa19.07■□□□□ 0.64
IRF9-204ENST00000559229 MKI67P46013 3256 aaKnown RBP19.06■□□□□ 0.64
IRF9-204ENST00000559229 CT47B1P0C2W7 299 aaPredicted RBP19.06■□□□□ 0.64
IRF9-204ENST00000559229 GTF2A2P52657 109 aa19.06■□□□□ 0.64
IRF9-204ENST00000559229 SP3Q02447 781 aa19.06■□□□□ 0.64
IRF9-204ENST00000559229 ATG9AQ7Z3C6 839 aa19.06■□□□□ 0.64
IRF9-204ENST00000559229 CNKSR2Q8WXI2 1034 aa19.06■□□□□ 0.64
IRF9-204ENST00000559229 HOOK2Q96ED9 719 aa19.06■□□□□ 0.64
IRF9-204ENST00000559229 ARAP2Q8WZ64 1704 aa19.05■□□□□ 0.64
IRF9-204ENST00000559229 INTS3Q68E01 1043 aaKnown RBP19.05■□□□□ 0.64
IRF9-204ENST00000559229 CD99L2Q8TCZ2 262 aa19.05■□□□□ 0.64
IRF9-204ENST00000559229 BRI3BPQ8WY22 251 aa19.05■□□□□ 0.64
IRF9-204ENST00000559229 PTPN22Q9Y2R2 807 aa19.05■□□□□ 0.64
IRF9-204ENST00000559229 LAMB1P07942 1786 aa19.04■□□□□ 0.64
IRF9-204ENST00000559229 BRCA2P51587 3418 aa19.04■□□□□ 0.64
IRF9-204ENST00000559229 CCL15-CCL14A0A0B4J2E2 113 aa19.04■□□□□ 0.64
IRF9-204ENST00000559229 CIAO1O76071 339 aa19.04■□□□□ 0.64
IRF9-204ENST00000559229 UBTFL1P0CB47 393 aaPredicted RBP19.04■□□□□ 0.64
IRF9-204ENST00000559229 CCL15Q16663 113 aa19.04■□□□□ 0.64
IRF9-204ENST00000559229 EFCC1Q9HA90 598 aa19.04■□□□□ 0.64
IRF9-204ENST00000559229 SPDYE5A6NIY4 337 aa19.03■□□□□ 0.64
IRF9-204ENST00000559229 ERO1BQ86YB8 467 aa19.03■□□□□ 0.64
IRF9-204ENST00000559229 OTUD5Q96G74 571 aa19.03■□□□□ 0.64
IRF9-204ENST00000559229 ZFYVE28Q9HCC9 887 aa19.03■□□□□ 0.64
IRF9-204ENST00000559229 CEP126Q9P2H0 1117 aa19.03■□□□□ 0.64
IRF9-204ENST00000559229 NOB1Q9ULX3 412 aaKnown RBP19.03■□□□□ 0.64
IRF9-204ENST00000559229 HDAC5Q9UQL6 1122 aa19.03■□□□□ 0.64
IRF9-204ENST00000559229 TAF1CQ15572 869 aaPredicted RBP19.02■□□□□ 0.64
IRF9-204ENST00000559229 DCAF15Q66K64 600 aa19.02■□□□□ 0.64
IRF9-204ENST00000559229 WRNIP1Q96S55 665 aa19.02■□□□□ 0.64
IRF9-204ENST00000559229 API5Q9BZZ5 524 aaKnown RBP19.02■□□□□ 0.64
IRF9-204ENST00000559229 SIL1Q9H173 461 aa19.02■□□□□ 0.64
IRF9-204ENST00000559229 SNCAIPQ9Y6H5 919 aa19.02■□□□□ 0.64
IRF9-204ENST00000559229 ATP2B3Q16720 1220 aa19.01■□□□□ 0.63
IRF9-204ENST00000559229 FAM43AQ8N2R8 423 aa19.01■□□□□ 0.63
IRF9-204ENST00000559229 FAM151AQ8WW52 585 aa19.01■□□□□ 0.63
IRF9-204ENST00000559229 ZKSCAN4Q969J2 545 aaPredicted RBP19.01■□□□□ 0.63
IRF9-204ENST00000559229 GNL3LQ9NVN8 582 aaKnown RBP19.01■□□□□ 0.63
IRF9-204ENST00000559229 RPAP1Q9BWH6 1393 aaPredicted RBP19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms