RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 MYO3BQ8WXR4 1341 aa13.34□□□□□ -0.27
TPM1-217ENST00000559108 FOCADQ5VW36 1801 aa13.34□□□□□ -0.27
TPM1-217ENST00000559108 VEGFAP15692 232 aaPredicted RBP13.33□□□□□ -0.28
TPM1-217ENST00000559108 MX1P20591 662 aa13.33□□□□□ -0.28
TPM1-217ENST00000559108 NBPF9Q3BBW0 867 aa13.33□□□□□ -0.28
TPM1-217ENST00000559108 RBM26Q5T8P6 1007 aaKnown RBP13.33□□□□□ -0.28
TPM1-217ENST00000559108 ADGRA1Q86SQ6 560 aa13.33□□□□□ -0.28
TPM1-217ENST00000559108 PLEKHM2Q8IWE5 1019 aa13.33□□□□□ -0.28
TPM1-217ENST00000559108 WDR66Q8TBY9 1149 aa13.33□□□□□ -0.28
TPM1-217ENST00000559108 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.33□□□□□ -0.28
TPM1-217ENST00000559108 MYOZ2Q9NPC6 264 aa13.33□□□□□ -0.28
TPM1-217ENST00000559108 STAP2Q9UGK3 403 aa13.33□□□□□ -0.28
TPM1-217ENST00000559108 SCAF8Q9UPN6 1271 aaKnown RBP13.33□□□□□ -0.28
TPM1-217ENST00000559108 MAP4K4O95819 1239 aaPredicted RBP13.32□□□□□ -0.28
TPM1-217ENST00000559108 PDE1AP54750 535 aa13.32□□□□□ -0.28
TPM1-217ENST00000559108 MECOMQ03112 1051 aa13.32□□□□□ -0.28
TPM1-217ENST00000559108 FMR1Q06787 632 aaKnown RBP eCLIP13.32□□□□□ -0.28
TPM1-217ENST00000559108 KIF4BQ2VIQ3 1234 aa13.32□□□□□ -0.28
TPM1-217ENST00000559108 PRMT6Q96LA8 375 aaPredicted RBP13.32□□□□□ -0.28
TPM1-217ENST00000559108 DNAJC2Q99543 621 aaKnown RBP13.32□□□□□ -0.28
TPM1-217ENST00000559108 HAUS7Q99871 368 aa13.32□□□□□ -0.28
TPM1-217ENST00000559108 ADARB2Q9NS39 739 aaKnown RBP13.32□□□□□ -0.28
TPM1-217ENST00000559108 ABCF2Q9UG63 623 aa13.32□□□□□ -0.28
TPM1-217ENST00000559108 DDX60LQ5H9U9 1706 aaKnown RBP13.31□□□□□ -0.28
TPM1-217ENST00000559108 IQCA1LA6NCM1 817 aa13.31□□□□□ -0.28
TPM1-217ENST00000559108 GOLIM4O00461 696 aa13.31□□□□□ -0.28
TPM1-217ENST00000559108 WNT10BO00744 389 aa13.31□□□□□ -0.28
TPM1-217ENST00000559108 LMOD1P29536 600 aaPredicted RBP13.31□□□□□ -0.28
TPM1-217ENST00000559108 CRKP46108 304 aa13.31□□□□□ -0.28
TPM1-217ENST00000559108 CFAP100Q494V2 611 aa13.31□□□□□ -0.28
TPM1-217ENST00000559108 TBC1D22AQ8WUA7 517 aa13.31□□□□□ -0.28
TPM1-217ENST00000559108 NSUN4Q96CB9 384 aaKnown RBP13.31□□□□□ -0.28
TPM1-217ENST00000559108 DAGLAQ9Y4D2 1042 aa13.31□□□□□ -0.28
TPM1-217ENST00000559108 SIPA1L1O43166 1804 aa13.3□□□□□ -0.28
TPM1-217ENST00000559108 LDHBP07195 334 aaKnown RBP13.3□□□□□ -0.28
TPM1-217ENST00000559108 EAPPQ56P03 285 aaPredicted RBP13.3□□□□□ -0.28
TPM1-217ENST00000559108 APOBEC3HQ6NTF7 200 aaKnown RBP13.3□□□□□ -0.28
TPM1-217ENST00000559108 CENPQQ7L2Z9 268 aaPredicted RBP13.3□□□□□ -0.28
TPM1-217ENST00000559108 CCDC136Q96JN2 1154 aa13.3□□□□□ -0.28
TPM1-217ENST00000559108 GAKO14976 1311 aa13.3□□□□□ -0.28
TPM1-217ENST00000559108 TTC41PQ6P2S7 1318 aa13.3□□□□□ -0.28
TPM1-217ENST00000559108 RFX7Q2KHR2 1363 aa13.3□□□□□ -0.28
TPM1-217ENST00000559108 SPDYE2BA6NHP3 402 aa13.29□□□□□ -0.28
TPM1-217ENST00000559108 H7C1D1 291 aa13.29□□□□□ -0.28
TPM1-217ENST00000559108 SPDYE6P0CI01 402 aa13.29□□□□□ -0.28
TPM1-217ENST00000559108 MAP1SQ66K74 1059 aaPredicted RBP13.29□□□□□ -0.28
TPM1-217ENST00000559108 USP50Q70EL3 339 aaPredicted RBP13.29□□□□□ -0.28
TPM1-217ENST00000559108 MTMR14Q8NCE2 650 aa13.29□□□□□ -0.28
TPM1-217ENST00000559108 PAG1Q9NWQ8 432 aa13.29□□□□□ -0.28
TPM1-217ENST00000559108 PPP4R2Q9NY27 417 aa13.29□□□□□ -0.28
TPM1-217ENST00000559108 PGAP2Q9UHJ9 254 aa13.29□□□□□ -0.28
TPM1-217ENST00000559108 SERPINA10Q9UK55 444 aa13.29□□□□□ -0.28
TPM1-217ENST00000559108 PAPPA2Q9BXP8 1791 aa13.29□□□□□ -0.28
TPM1-217ENST00000559108 TRPM7Q96QT4 1865 aa13.29□□□□□ -0.28
TPM1-217ENST00000559108 TCRBV5S4A2TA0A5A2 114 aa13.28□□□□□ -0.28
TPM1-217ENST00000559108 CLRN2A0PK11 232 aa13.28□□□□□ -0.28
TPM1-217ENST00000559108 GSPT1P15170 499 aaKnown RBP13.28□□□□□ -0.28
TPM1-217ENST00000559108 CACNB3P54284 484 aa13.28□□□□□ -0.28
TPM1-217ENST00000559108 ANGEL2Q5VTE6 544 aaKnown RBP13.28□□□□□ -0.28
TPM1-217ENST00000559108 ERICH6BQ5W0A0 696 aa13.28□□□□□ -0.28
TPM1-217ENST00000559108 CDAN1Q8IWY9 1227 aa13.28□□□□□ -0.28
TPM1-217ENST00000559108 ZDHHC15Q96MV8 337 aa13.28□□□□□ -0.28
TPM1-217ENST00000559108 OSBPL3Q9H4L5 887 aa13.28□□□□□ -0.28
TPM1-217ENST00000559108 GGA3Q9NZ52 723 aa13.28□□□□□ -0.28
TPM1-217ENST00000559108 RAI14Q9P0K7 980 aa13.28□□□□□ -0.28
TPM1-217ENST00000559108 SUGT1Q9Y2Z0 365 aa13.28□□□□□ -0.28
TPM1-217ENST00000559108 SSC5DA1L4H1 1573 aa13.28□□□□□ -0.28
TPM1-217ENST00000559108 ADM5C9JUS6 153 aa13.27□□□□□ -0.29
TPM1-217ENST00000559108 TRAF5O00463 557 aa13.27□□□□□ -0.29
TPM1-217ENST00000559108 IDH1O75874 414 aaKnown RBP13.27□□□□□ -0.29
TPM1-217ENST00000559108 PDE6AP16499 860 aa13.27□□□□□ -0.29
TPM1-217ENST00000559108 HDLBPQ00341 1268 aaKnown RBP13.27□□□□□ -0.29
TPM1-217ENST00000559108 ERICH6Q7L0X2 663 aa13.27□□□□□ -0.29
TPM1-217ENST00000559108 GLIS2Q9BZE0 524 aaPredicted RBP13.27□□□□□ -0.29
TPM1-217ENST00000559108 TDRD3Q9H7E2 651 aaKnown RBP13.27□□□□□ -0.29
TPM1-217ENST00000559108 LRP2BPQ9P2M1 347 aa13.27□□□□□ -0.29
TPM1-217ENST00000559108 MROH7-TTC4A0A0A0MT08 1334 aa13.27□□□□□ -0.29
TPM1-217ENST00000559108 CNTNAP1P78357 1384 aa13.27□□□□□ -0.29
TPM1-217ENST00000559108 NAV1Q8NEY1 1877 aa13.27□□□□□ -0.29
TPM1-217ENST00000559108 OTOFQ9HC10 1997 aa13.27□□□□□ -0.29
TPM1-217ENST00000559108 GLRX3O76003 335 aaKnown RBP13.26□□□□□ -0.29
TPM1-217ENST00000559108 ITGBL1O95965 494 aaPredicted RBP13.26□□□□□ -0.29
TPM1-217ENST00000559108 RHBDL3P58872 404 aa13.26□□□□□ -0.29
TPM1-217ENST00000559108 DYNLL1P63167 89 aaKnown RBP13.26□□□□□ -0.29
TPM1-217ENST00000559108 NFIAQ12857 509 aa13.26□□□□□ -0.29
TPM1-217ENST00000559108 DLGAP5Q15398 846 aa13.26□□□□□ -0.29
TPM1-217ENST00000559108 SPDYE2Q495Y8 402 aa13.26□□□□□ -0.29
TPM1-217ENST00000559108 HHIPL2Q6UWX4 724 aa13.26□□□□□ -0.29
TPM1-217ENST00000559108 PNMA8AQ86V59 439 aaPredicted RBP13.26□□□□□ -0.29
TPM1-217ENST00000559108 LDHDQ86WU2 507 aa13.26□□□□□ -0.29
TPM1-217ENST00000559108 DZIP1Q86YF9 867 aaKnown RBP13.26□□□□□ -0.29
TPM1-217ENST00000559108 OGFOD1Q8N543 542 aa13.26□□□□□ -0.29
TPM1-217ENST00000559108 ZGPATQ8N5A5 531 aaKnown RBP13.26□□□□□ -0.29
TPM1-217ENST00000559108 MAGEB6Q8N7X4 407 aa13.26□□□□□ -0.29
TPM1-217ENST00000559108 TEKT1Q969V4 418 aa13.26□□□□□ -0.29
TPM1-217ENST00000559108 HDAC9Q9UKV0 1011 aa13.26□□□□□ -0.29
TPM1-217ENST00000559108 BAZ2AQ9UIF9 1905 aaKnown RBP13.25□□□□□ -0.29
TPM1-217ENST00000559108 GPR75-ASB3A0A0A6YYF3 556 aa13.25□□□□□ -0.29
TPM1-217ENST00000559108 TOMM70O94826 608 aa13.25□□□□□ -0.29
TPM1-217ENST00000559108 ADD2P35612 726 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms