RNA–Protein interactions for RNA: ENST00000558989.1

SPG11-214, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 1,816 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-214ENST00000558989 MFSD14BQ5SR56 506 aa11.96□□□□□ -0.49
SPG11-214ENST00000558989 PRAMEF18Q5VWM3 479 aa11.96□□□□□ -0.49
SPG11-214ENST00000558989 CDC37L1Q7L3B6 337 aa11.96□□□□□ -0.49
SPG11-214ENST00000558989 TDRD7Q8NHU6 1098 aaKnown RBP11.96□□□□□ -0.49
SPG11-214ENST00000558989 HDAC9Q9UKV0 1011 aa11.96□□□□□ -0.49
SPG11-214ENST00000558989 MYO3BQ8WXR4 1341 aa11.96□□□□□ -0.49
SPG11-214ENST00000558989 ARAP2Q8WZ64 1704 aa11.96□□□□□ -0.49
SPG11-214ENST00000558989 ECM29Q5VYK3 1845 aa11.96□□□□□ -0.5
SPG11-214ENST00000558989 ZBTB7BO15156 539 aaPredicted RBP11.95□□□□□ -0.5
SPG11-214ENST00000558989 ADORA1P30542 326 aa11.95□□□□□ -0.5
SPG11-214ENST00000558989 OS9Q13438 667 aaPredicted RBP11.95□□□□□ -0.5
SPG11-214ENST00000558989 C20orf194Q5TEA3 1177 aa11.95□□□□□ -0.5
SPG11-214ENST00000558989 CST9Q5W186 159 aa11.95□□□□□ -0.5
SPG11-214ENST00000558989 NEUROD6Q96NK8 337 aa11.95□□□□□ -0.5
SPG11-214ENST00000558989 COPRSQ9NQ92 184 aa11.95□□□□□ -0.5
SPG11-214ENST00000558989 SERPINA10Q9UK55 444 aa11.95□□□□□ -0.5
SPG11-214ENST00000558989 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.95□□□□□ -0.5
SPG11-214ENST00000558989 CIAO1O76071 339 aa11.95□□□□□ -0.5
SPG11-214ENST00000558989 FGFR2P21802 821 aa11.95□□□□□ -0.5
SPG11-214ENST00000558989 TIMM10P62072 90 aa11.95□□□□□ -0.5
SPG11-214ENST00000558989 G3BP1Q13283 466 aaKnown RBP eCLIP11.95□□□□□ -0.5
SPG11-214ENST00000558989 GRIK5Q16478 980 aa11.95□□□□□ -0.5
SPG11-214ENST00000558989 FBXO33Q7Z6M2 555 aa11.95□□□□□ -0.5
SPG11-214ENST00000558989 SULF1Q8IWU6 871 aa11.95□□□□□ -0.5
SPG11-214ENST00000558989 LPIN2Q92539 896 aa11.95□□□□□ -0.5
SPG11-214ENST00000558989 PGAP2Q9UHJ9 254 aa11.95□□□□□ -0.5
SPG11-214ENST00000558989 WNT10BO00744 389 aa11.94□□□□□ -0.5
SPG11-214ENST00000558989 TTF2Q9UNY4 1162 aaKnown RBP11.94□□□□□ -0.5
SPG11-214ENST00000558989 AK9Q5TCS8 1911 aa11.94□□□□□ -0.5
SPG11-214ENST00000558989 CLRN2A0PK11 232 aa11.93□□□□□ -0.5
SPG11-214ENST00000558989 ATP8B2P98198 1209 aa11.93□□□□□ -0.5
SPG11-214ENST00000558989 MTX1Q13505 466 aa11.93□□□□□ -0.5
SPG11-214ENST00000558989 MVPQ14764 893 aaKnown RBP11.93□□□□□ -0.5
SPG11-214ENST00000558989 DLGAP5Q15398 846 aa11.93□□□□□ -0.5
SPG11-214ENST00000558989 CFAP100Q494V2 611 aa11.93□□□□□ -0.5
SPG11-214ENST00000558989 PCNTO95613 3336 aa11.93□□□□□ -0.5
SPG11-214ENST00000558989 ZNF609O15014 1411 aa11.93□□□□□ -0.5
SPG11-214ENST00000558989 FAM205AQ6ZU69 1335 aa11.93□□□□□ -0.5
SPG11-214ENST00000558989 SURF6O75683 361 aaKnown RBP11.93□□□□□ -0.5
SPG11-214ENST00000558989 PHKA1P46020 1223 aa11.93□□□□□ -0.5
SPG11-214ENST00000558989 PDE4DQ08499 809 aa11.93□□□□□ -0.5
SPG11-214ENST00000558989 DEFB115Q30KQ5 88 aa11.93□□□□□ -0.5
SPG11-214ENST00000558989 FAM177A1Q8N128 213 aaPredicted RBP11.93□□□□□ -0.5
SPG11-214ENST00000558989 RETREG2Q8NC44 543 aa11.93□□□□□ -0.5
SPG11-214ENST00000558989 VEZTQ9HBM0 779 aa11.93□□□□□ -0.5
SPG11-214ENST00000558989 AOX1Q06278 1338 aa11.92□□□□□ -0.5
SPG11-214ENST00000558989 A0A1B0GUL7 405 aa11.92□□□□□ -0.5
SPG11-214ENST00000558989 MS4A1P11836 297 aa11.92□□□□□ -0.5
SPG11-214ENST00000558989 VEGFBP49765 207 aa11.92□□□□□ -0.5
SPG11-214ENST00000558989 PRKG1Q13976 671 aa11.92□□□□□ -0.5
SPG11-214ENST00000558989 CYP4F22Q6NT55 531 aa11.92□□□□□ -0.5
SPG11-214ENST00000558989 CDCA5Q96FF9 252 aa11.92□□□□□ -0.5
SPG11-214ENST00000558989 MYH2Q9UKX2 1941 aa11.92□□□□□ -0.5
SPG11-214ENST00000558989 COL1A1P02452 1464 aaPredicted RBP11.92□□□□□ -0.5
SPG11-214ENST00000558989 MYO5AQ9Y4I1 1855 aaKnown RBP11.91□□□□□ -0.5
SPG11-214ENST00000558989 CNTNAP1P78357 1384 aa11.91□□□□□ -0.5
SPG11-214ENST00000558989 GORABQ5T7V8 394 aa11.91□□□□□ -0.5
SPG11-214ENST00000558989 CEP85Q6P2H3 762 aa11.91□□□□□ -0.5
SPG11-214ENST00000558989 XAGE2Q96GT9 111 aa11.91□□□□□ -0.5
SPG11-214ENST00000558989 PRMT6Q96LA8 375 aaPredicted RBP11.91□□□□□ -0.5
SPG11-214ENST00000558989 TTLL12Q14166 644 aaPredicted RBP11.9□□□□□ -0.5
SPG11-214ENST00000558989 CCDC102BQ68D86 513 aa11.9□□□□□ -0.5
SPG11-214ENST00000558989 MOB2Q70IA6 237 aa11.9□□□□□ -0.5
SPG11-214ENST00000558989 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.9□□□□□ -0.5
SPG11-214ENST00000558989 SSH3Q8TE77 659 aa11.9□□□□□ -0.5
SPG11-214ENST00000558989 DDX19BQ9UMR2 479 aa11.9□□□□□ -0.5
SPG11-214ENST00000558989 EXOC6BQ9Y2D4 811 aa11.9□□□□□ -0.5
SPG11-214ENST00000558989 TRIM66O15016 1216 aa11.9□□□□□ -0.5
SPG11-214ENST00000558989 HUNKP57058 714 aa11.9□□□□□ -0.5
SPG11-214ENST00000558989 IRF5Q13568 498 aa11.9□□□□□ -0.5
SPG11-214ENST00000558989 CCDC97Q96F63 343 aaPredicted RBP11.9□□□□□ -0.5
SPG11-214ENST00000558989 TDRD3Q9H7E2 651 aaKnown RBP11.9□□□□□ -0.5
SPG11-214ENST00000558989 GBA2Q9HCG7 927 aaPredicted RBP11.9□□□□□ -0.5
SPG11-214ENST00000558989 GNL3LQ9NVN8 582 aaKnown RBP11.9□□□□□ -0.5
SPG11-214ENST00000558989 FZD1Q9UP38 647 aa11.9□□□□□ -0.5
SPG11-214ENST00000558989 AKAP2Q9Y2D5 859 aa11.9□□□□□ -0.5
SPG11-214ENST00000558989 CRKP46108 304 aa11.89□□□□□ -0.51
SPG11-214ENST00000558989 FKBP1AP62942 108 aaKnown RBP11.89□□□□□ -0.51
SPG11-214ENST00000558989 FAM117AQ9C073 453 aa11.89□□□□□ -0.51
SPG11-214ENST00000558989 TLL2Q9Y6L7 1015 aa11.89□□□□□ -0.51
SPG11-214ENST00000558989 WDR33Q9C0J8 1336 aaKnown RBP11.89□□□□□ -0.51
SPG11-214ENST00000558989 SPDYE2BA6NHP3 402 aa11.88□□□□□ -0.51
SPG11-214ENST00000558989 MYO1BO43795 1136 aa11.88□□□□□ -0.51
SPG11-214ENST00000558989 AOC2O75106 756 aa11.88□□□□□ -0.51
SPG11-214ENST00000558989 SPDYE6P0CI01 402 aa11.88□□□□□ -0.51
SPG11-214ENST00000558989 CACNB3P54284 484 aa11.88□□□□□ -0.51
SPG11-214ENST00000558989 PI16Q6UXB8 463 aa11.88□□□□□ -0.51
SPG11-214ENST00000558989 SAPCD2Q86UD0 394 aa11.88□□□□□ -0.51
SPG11-214ENST00000558989 DHX37Q8IY37 1157 aaKnown RBP11.88□□□□□ -0.51
SPG11-214ENST00000558989 C2orf69Q8N8R5 385 aa11.88□□□□□ -0.51
SPG11-214ENST00000558989 TBC1D22AQ8WUA7 517 aa11.88□□□□□ -0.51
SPG11-214ENST00000558989 UBE2Q2Q8WVN8 375 aa11.88□□□□□ -0.51
SPG11-214ENST00000558989 CAPNS2Q96L46 248 aa11.88□□□□□ -0.51
SPG11-214ENST00000558989 ABCF2Q9UG63 623 aa11.88□□□□□ -0.51
SPG11-214ENST00000558989 RASSF10A6NK89 507 aa11.88□□□□□ -0.51
SPG11-214ENST00000558989 TCP10L2B9ZVM9 353 aa11.88□□□□□ -0.51
SPG11-214ENST00000558989 PRDX5P30044 214 aa11.88□□□□□ -0.51
SPG11-214ENST00000558989 RASGRF1Q13972 1273 aa11.88□□□□□ -0.51
SPG11-214ENST00000558989 DIXDC1Q155Q3 683 aa11.88□□□□□ -0.51
SPG11-214ENST00000558989 E2F4Q16254 413 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms