RNA–Protein interactions for RNA: ENST00000558937.1

SMAD6-203, Transcript of SMAD family member 6, humanhuman

TSL 5

Gene SMAD6, Length 632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-203ENST00000558937 TNNQ9UQP3 1299 aa18.84■□□□□ 0.61
SMAD6-203ENST00000558937 BCAR3O75815 825 aa18.83■□□□□ 0.6
SMAD6-203ENST00000558937 TRIM27P14373 513 aa18.83■□□□□ 0.6
SMAD6-203ENST00000558937 MKRN3Q13064 507 aaKnown RBP18.83■□□□□ 0.6
SMAD6-203ENST00000558937 RASA3Q14644 834 aa18.83■□□□□ 0.6
SMAD6-203ENST00000558937 MAP3K11Q16584 847 aa18.83■□□□□ 0.6
SMAD6-203ENST00000558937 NBPF12Q5TAG4 269 aaPredicted RBP18.83■□□□□ 0.6
SMAD6-203ENST00000558937 IPO8O15397 1037 aaKnown RBP18.82■□□□□ 0.6
SMAD6-203ENST00000558937 GNAI3P08754 354 aa18.82■□□□□ 0.6
SMAD6-203ENST00000558937 HDLBPQ00341 1268 aaKnown RBP18.82■□□□□ 0.6
SMAD6-203ENST00000558937 TNFAIP1Q13829 316 aa18.82■□□□□ 0.6
SMAD6-203ENST00000558937 ATP2B3Q16720 1220 aa18.82■□□□□ 0.6
SMAD6-203ENST00000558937 SUPT20HL1Q3ZLR7 823 aa18.82■□□□□ 0.6
SMAD6-203ENST00000558937 COPRSQ9NQ92 184 aa18.82■□□□□ 0.6
SMAD6-203ENST00000558937 CEP126Q9P2H0 1117 aa18.82■□□□□ 0.6
SMAD6-203ENST00000558937 OTOFQ9HC10 1997 aa18.82■□□□□ 0.6
SMAD6-203ENST00000558937 PPP1R12BO60237 982 aaPredicted RBP18.81■□□□□ 0.6
SMAD6-203ENST00000558937 ATF7IPQ6VMQ6 1270 aa18.81■□□□□ 0.6
SMAD6-203ENST00000558937 FRAT1Q92837 279 aaPredicted RBP18.81■□□□□ 0.6
SMAD6-203ENST00000558937 MCOLN1Q9GZU1 580 aa18.81■□□□□ 0.6
SMAD6-203ENST00000558937 IL15P40933 162 aaPredicted RBP18.8■□□□□ 0.6
SMAD6-203ENST00000558937 SPRYD7Q5W111 196 aa18.8■□□□□ 0.6
SMAD6-203ENST00000558937 TEKT1Q969V4 418 aa18.8■□□□□ 0.6
SMAD6-203ENST00000558937 CLMNQ96JQ2 1002 aa18.8■□□□□ 0.6
SMAD6-203ENST00000558937 SUGT1Q9Y2Z0 365 aa18.8■□□□□ 0.6
SMAD6-203ENST00000558937 LAMB1P07942 1786 aa18.8■□□□□ 0.6
SMAD6-203ENST00000558937 MAST3O60307 1309 aa18.79■□□□□ 0.6
SMAD6-203ENST00000558937 TCP10L2B9ZVM9 353 aa18.79■□□□□ 0.6
SMAD6-203ENST00000558937 DGKZQ13574 1117 aa18.79■□□□□ 0.6
SMAD6-203ENST00000558937 CDAN1Q8IWY9 1227 aa18.79■□□□□ 0.6
SMAD6-203ENST00000558937 CLUAP1Q96AJ1 413 aa18.79■□□□□ 0.6
SMAD6-203ENST00000558937 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.79■□□□□ 0.6
SMAD6-203ENST00000558937 SRGAP3O43295 1099 aa18.78■□□□□ 0.6
SMAD6-203ENST00000558937 USP2O75604 605 aaPredicted RBP18.78■□□□□ 0.6
SMAD6-203ENST00000558937 IREB2P48200 963 aaKnown RBP18.78■□□□□ 0.6
SMAD6-203ENST00000558937 TM4SF4P48230 202 aa18.78■□□□□ 0.6
SMAD6-203ENST00000558937 SREBF2Q12772 1141 aa18.78■□□□□ 0.6
SMAD6-203ENST00000558937 MTX1Q13505 466 aa18.78■□□□□ 0.6
SMAD6-203ENST00000558937 WDR66Q8TBY9 1149 aa18.78■□□□□ 0.6
SMAD6-203ENST00000558937 SLC10A4Q96EP9 437 aa18.78■□□□□ 0.6
SMAD6-203ENST00000558937 WNK4Q96J92 1243 aa18.78■□□□□ 0.6
SMAD6-203ENST00000558937 TEPSINQ96N21 525 aa18.78■□□□□ 0.6
SMAD6-203ENST00000558937 PHKA1P46020 1223 aa18.77■□□□□ 0.6
SMAD6-203ENST00000558937 TNNI2P48788 182 aa18.77■□□□□ 0.6
SMAD6-203ENST00000558937 CACNB3P54284 484 aa18.77■□□□□ 0.6
SMAD6-203ENST00000558937 ZDHHC15Q96MV8 337 aa18.77■□□□□ 0.6
SMAD6-203ENST00000558937 MRIQ9BWK5 157 aa18.77■□□□□ 0.6
SMAD6-203ENST00000558937 TMEM39BQ9GZU3 492 aa18.77■□□□□ 0.6
SMAD6-203ENST00000558937 UNCXA6NJT0 531 aa18.76■□□□□ 0.59
SMAD6-203ENST00000558937 ADORA1P30542 326 aa18.76■□□□□ 0.59
SMAD6-203ENST00000558937 ZKSCAN2Q63HK3 967 aa18.76■□□□□ 0.59
SMAD6-203ENST00000558937 APOBEC3HQ6NTF7 200 aaKnown RBP18.76■□□□□ 0.59
SMAD6-203ENST00000558937 HHIPL2Q6UWX4 724 aa18.76■□□□□ 0.59
SMAD6-203ENST00000558937 GNL3LQ9NVN8 582 aaKnown RBP18.76■□□□□ 0.59
SMAD6-203ENST00000558937 TBC1D8O95759 1140 aa18.75■□□□□ 0.59
SMAD6-203ENST00000558937 GNAI2P04899 355 aa18.75■□□□□ 0.59
SMAD6-203ENST00000558937 ZBTB48P10074 688 aaPredicted RBP18.75■□□□□ 0.59
SMAD6-203ENST00000558937 ANKRD13AQ8IZ07 590 aa18.75■□□□□ 0.59
SMAD6-203ENST00000558937 TMEM57Q8N5G2 664 aa18.75■□□□□ 0.59
SMAD6-203ENST00000558937 TMOD2Q9NZR1 351 aa18.75■□□□□ 0.59
SMAD6-203ENST00000558937 MANSC4A6NHS7 340 aaPredicted RBP18.74■□□□□ 0.59
SMAD6-203ENST00000558937 CCDC85CA6NKD9 419 aa18.74■□□□□ 0.59
SMAD6-203ENST00000558937 SEMA3EO15041 775 aa18.74■□□□□ 0.59
SMAD6-203ENST00000558937 PRDX5P30044 214 aa18.74■□□□□ 0.59
SMAD6-203ENST00000558937 GJA5P36382 358 aa18.74■□□□□ 0.59
SMAD6-203ENST00000558937 DENND2AQ9ULE3 1009 aa18.74■□□□□ 0.59
SMAD6-203ENST00000558937 TFCP2Q12800 502 aa18.73■□□□□ 0.59
SMAD6-203ENST00000558937 DIXDC1Q155Q3 683 aa18.73■□□□□ 0.59
SMAD6-203ENST00000558937 CCDC102BQ68D86 513 aa18.73■□□□□ 0.59
SMAD6-203ENST00000558937 DAGLAQ9Y4D2 1042 aa18.73■□□□□ 0.59
SMAD6-203ENST00000558937 ZBED9Q6R2W3 1325 aa18.73■□□□□ 0.59
SMAD6-203ENST00000558937 SALL1Q9NSC2 1324 aa18.73■□□□□ 0.59
SMAD6-203ENST00000558937 RPAP1Q9BWH6 1393 aaPredicted RBP18.72■□□□□ 0.59
SMAD6-203ENST00000558937 PNMA6EA0A0J9YXQ4 647 aa18.72■□□□□ 0.59
SMAD6-203ENST00000558937 A0A1B0GUL7 405 aa18.72■□□□□ 0.59
SMAD6-203ENST00000558937 ZBTB22O15209 634 aa18.72■□□□□ 0.59
SMAD6-203ENST00000558937 TIMM10P62072 90 aa18.72■□□□□ 0.59
SMAD6-203ENST00000558937 FKBP1CQ5VVH2 108 aa18.72■□□□□ 0.59
SMAD6-203ENST00000558937 CTU1Q7Z7A3 348 aaKnown RBP18.72■□□□□ 0.59
SMAD6-203ENST00000558937 FAM83AQ86UY5 434 aa18.72■□□□□ 0.59
SMAD6-203ENST00000558937 ELP3Q9H9T3 547 aa18.72■□□□□ 0.59
SMAD6-203ENST00000558937 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.72■□□□□ 0.59
SMAD6-203ENST00000558937 GPR25O00155 361 aa18.71■□□□□ 0.59
SMAD6-203ENST00000558937 LDHBP07195 334 aaKnown RBP18.71■□□□□ 0.59
SMAD6-203ENST00000558937 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.71■□□□□ 0.59
SMAD6-203ENST00000558937 IFNL1Q8IU54 200 aa18.71■□□□□ 0.59
SMAD6-203ENST00000558937 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.71■□□□□ 0.59
SMAD6-203ENST00000558937 ZNF296Q8WUU4 475 aaPredicted RBP18.71■□□□□ 0.59
SMAD6-203ENST00000558937 CFHR5Q9BXR6 569 aa18.71■□□□□ 0.59
SMAD6-203ENST00000558937 AKAP2Q9Y2D5 859 aa18.71■□□□□ 0.59
SMAD6-203ENST00000558937 MYH2Q9UKX2 1941 aa18.7■□□□□ 0.58
SMAD6-203ENST00000558937 IGF2BP3O00425 579 aaKnown RBP eCLIP18.7■□□□□ 0.58
SMAD6-203ENST00000558937 INHBEP58166 350 aa18.7■□□□□ 0.58
SMAD6-203ENST00000558937 RASGRF1Q13972 1273 aa18.7■□□□□ 0.58
SMAD6-203ENST00000558937 NOM1Q5C9Z4 860 aaKnown RBP18.7■□□□□ 0.58
SMAD6-203ENST00000558937 XAGE2Q96GT9 111 aa18.7■□□□□ 0.58
SMAD6-203ENST00000558937 R3HDMLQ9H3Y0 253 aa18.7■□□□□ 0.58
SMAD6-203ENST00000558937 ALDH1A1P00352 501 aa18.69■□□□□ 0.58
SMAD6-203ENST00000558937 MAP3K9P80192 1104 aa18.69■□□□□ 0.58
SMAD6-203ENST00000558937 VGLL4Q14135 290 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms