RNA–Protein interactions for RNA: ENST00000558806.5

AP3S2-206, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

TSL 1 (best)

Gene AP3S2, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-206ENST00000558806 ZNF521Q96K83 1311 aa13.46□□□□□ -0.25
AP3S2-206ENST00000558806 TESPA1A2RU30 521 aaPredicted RBP13.46□□□□□ -0.25
AP3S2-206ENST00000558806 FRAT2O75474 233 aaPredicted RBP13.46□□□□□ -0.25
AP3S2-206ENST00000558806 GJA5P36382 358 aa13.46□□□□□ -0.25
AP3S2-206ENST00000558806 HDLBPQ00341 1268 aaKnown RBP13.46□□□□□ -0.25
AP3S2-206ENST00000558806 CRHR2Q13324 411 aa13.46□□□□□ -0.25
AP3S2-206ENST00000558806 OTOP1Q7RTM1 612 aa13.46□□□□□ -0.25
AP3S2-206ENST00000558806 FBXO33Q7Z6M2 555 aa13.46□□□□□ -0.25
AP3S2-206ENST00000558806 OPTNQ96CV9 577 aa13.46□□□□□ -0.25
AP3S2-206ENST00000558806 TEPSINQ96N21 525 aa13.46□□□□□ -0.25
AP3S2-206ENST00000558806 TCP10L2B9ZVM9 353 aa13.45□□□□□ -0.26
AP3S2-206ENST00000558806 PDE8BO95263 885 aa13.45□□□□□ -0.26
AP3S2-206ENST00000558806 LRRC24Q50LG9 513 aa13.45□□□□□ -0.26
AP3S2-206ENST00000558806 INTS3Q68E01 1043 aaKnown RBP13.45□□□□□ -0.26
AP3S2-206ENST00000558806 MRPL50Q8N5N7 158 aaKnown RBP13.45□□□□□ -0.26
AP3S2-206ENST00000558806 ANKRD44Q8N8A2 993 aa13.45□□□□□ -0.26
AP3S2-206ENST00000558806 VGLL2Q8N8G2 317 aa13.45□□□□□ -0.26
AP3S2-206ENST00000558806 TEKT1Q969V4 418 aa13.45□□□□□ -0.26
AP3S2-206ENST00000558806 TMEM39BQ9GZU3 492 aa13.45□□□□□ -0.26
AP3S2-206ENST00000558806 ELP3Q9H9T3 547 aa13.45□□□□□ -0.26
AP3S2-206ENST00000558806 KIF16BQ96L93 1317 aa13.44□□□□□ -0.26
AP3S2-206ENST00000558806 OTOFQ9HC10 1997 aa13.44□□□□□ -0.26
AP3S2-206ENST00000558806 CHAF1AQ13111 956 aaPredicted RBP13.44□□□□□ -0.26
AP3S2-206ENST00000558806 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.44□□□□□ -0.26
AP3S2-206ENST00000558806 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.44□□□□□ -0.26
AP3S2-206ENST00000558806 PTPN18Q99952 460 aa13.44□□□□□ -0.26
AP3S2-206ENST00000558806 MRIQ9BWK5 157 aa13.44□□□□□ -0.26
AP3S2-206ENST00000558806 TMOD2Q9NZR1 351 aa13.44□□□□□ -0.26
AP3S2-206ENST00000558806 IQSEC3Q9UPP2 1182 aaPredicted RBP13.44□□□□□ -0.26
AP3S2-206ENST00000558806 CSADQ9Y600 493 aa13.44□□□□□ -0.26
AP3S2-206ENST00000558806 PDE4DIPQ5VU43 2346 aa13.44□□□□□ -0.26
AP3S2-206ENST00000558806 MAST3O60307 1309 aa13.43□□□□□ -0.26
AP3S2-206ENST00000558806 E9PSI1 815 aa13.43□□□□□ -0.26
AP3S2-206ENST00000558806 GTF2A2P52657 109 aa13.43□□□□□ -0.26
AP3S2-206ENST00000558806 MAP3K9P80192 1104 aa13.43□□□□□ -0.26
AP3S2-206ENST00000558806 SP3Q02447 781 aa13.43□□□□□ -0.26
AP3S2-206ENST00000558806 VGLL4Q14135 290 aa13.43□□□□□ -0.26
AP3S2-206ENST00000558806 GRIK5Q16478 980 aa13.43□□□□□ -0.26
AP3S2-206ENST00000558806 CDAN1Q8IWY9 1227 aa13.43□□□□□ -0.26
AP3S2-206ENST00000558806 CD99L2Q8TCZ2 262 aa13.43□□□□□ -0.26
AP3S2-206ENST00000558806 HOOK2Q96ED9 719 aa13.43□□□□□ -0.26
AP3S2-206ENST00000558806 MS4A4AQ96JQ5 239 aa13.43□□□□□ -0.26
AP3S2-206ENST00000558806 ZDHHC15Q96MV8 337 aa13.43□□□□□ -0.26
AP3S2-206ENST00000558806 PCDH10Q9P2E7 1040 aa13.43□□□□□ -0.26
AP3S2-206ENST00000558806 PTPN22Q9Y2R2 807 aa13.43□□□□□ -0.26
AP3S2-206ENST00000558806 SUGT1Q9Y2Z0 365 aa13.43□□□□□ -0.26
AP3S2-206ENST00000558806 IFIT1P09914 478 aaKnown RBP13.42□□□□□ -0.26
AP3S2-206ENST00000558806 PUM3Q15397 648 aaKnown RBP13.42□□□□□ -0.26
AP3S2-206ENST00000558806 FKBP1CQ5VVH2 108 aa13.42□□□□□ -0.26
AP3S2-206ENST00000558806 FAM83AQ86UY5 434 aa13.42□□□□□ -0.26
AP3S2-206ENST00000558806 EFCC1Q9HA90 598 aa13.42□□□□□ -0.26
AP3S2-206ENST00000558806 CCL15-CCL14A0A0B4J2E2 113 aa13.41□□□□□ -0.26
AP3S2-206ENST00000558806 WDHD1O75717 1129 aaPredicted RBP13.41□□□□□ -0.26
AP3S2-206ENST00000558806 BCAMP50895 628 aa13.41□□□□□ -0.26
AP3S2-206ENST00000558806 ARHGEF6Q15052 776 aa13.41□□□□□ -0.26
AP3S2-206ENST00000558806 CCL15Q16663 113 aa13.41□□□□□ -0.26
AP3S2-206ENST00000558806 KLHDC4Q8TBB5 520 aa13.41□□□□□ -0.26
AP3S2-206ENST00000558806 CNKSR2Q8WXI2 1034 aa13.41□□□□□ -0.26
AP3S2-206ENST00000558806 BRI3BPQ8WY22 251 aa13.41□□□□□ -0.26
AP3S2-206ENST00000558806 SSH1Q8WYL5 1049 aa13.41□□□□□ -0.26
AP3S2-206ENST00000558806 OTUD5Q96G74 571 aa13.41□□□□□ -0.26
AP3S2-206ENST00000558806 USP44Q9H0E7 712 aa13.41□□□□□ -0.26
AP3S2-206ENST00000558806 ZFYVE28Q9HCC9 887 aa13.41□□□□□ -0.26
AP3S2-206ENST00000558806 SPDYE5A6NIY4 337 aa13.4□□□□□ -0.26
AP3S2-206ENST00000558806 SLC5A1P13866 664 aa13.4□□□□□ -0.26
AP3S2-206ENST00000558806 FGFR2P21802 821 aa13.4□□□□□ -0.26
AP3S2-206ENST00000558806 CACNB3P54284 484 aa13.4□□□□□ -0.26
AP3S2-206ENST00000558806 TAF1CQ15572 869 aaPredicted RBP13.4□□□□□ -0.26
AP3S2-206ENST00000558806 APOBEC3HQ6NTF7 200 aaKnown RBP13.4□□□□□ -0.26
AP3S2-206ENST00000558806 HHIPL2Q6UWX4 724 aa13.4□□□□□ -0.26
AP3S2-206ENST00000558806 ARMC5Q96C12 935 aa13.4□□□□□ -0.26
AP3S2-206ENST00000558806 RPAP1Q9BWH6 1393 aaPredicted RBP13.4□□□□□ -0.26
AP3S2-206ENST00000558806 HTTP42858 3142 aa13.4□□□□□ -0.26
AP3S2-206ENST00000558806 EYA2O00167 538 aa13.39□□□□□ -0.27
AP3S2-206ENST00000558806 ALDH1L2Q3SY69 923 aa13.39□□□□□ -0.27
AP3S2-206ENST00000558806 DCAF15Q66K64 600 aa13.39□□□□□ -0.27
AP3S2-206ENST00000558806 ERO1BQ86YB8 467 aa13.39□□□□□ -0.27
AP3S2-206ENST00000558806 WDR66Q8TBY9 1149 aa13.39□□□□□ -0.27
AP3S2-206ENST00000558806 LPIN2Q92539 896 aa13.39□□□□□ -0.27
AP3S2-206ENST00000558806 WRNIP1Q96S55 665 aa13.39□□□□□ -0.27
AP3S2-206ENST00000558806 ZCCHC17Q9NP64 241 aaKnown RBP13.39□□□□□ -0.27
AP3S2-206ENST00000558806 POTEFA5A3E0 1075 aa13.38□□□□□ -0.27
AP3S2-206ENST00000558806 CETPP11597 493 aa13.38□□□□□ -0.27
AP3S2-206ENST00000558806 SLFN5Q08AF3 891 aa13.38□□□□□ -0.27
AP3S2-206ENST00000558806 FAM43AQ8N2R8 423 aa13.38□□□□□ -0.27
AP3S2-206ENST00000558806 GCC1Q96CN9 775 aa13.38□□□□□ -0.27
AP3S2-206ENST00000558806 FBXO3Q9UK99 471 aa13.38□□□□□ -0.27
AP3S2-206ENST00000558806 SNCAIPQ9Y6H5 919 aa13.38□□□□□ -0.27
AP3S2-206ENST00000558806 CENPFP49454 3210 aa13.37□□□□□ -0.27
AP3S2-206ENST00000558806 RFX5P48382 616 aaPredicted RBP13.37□□□□□ -0.27
AP3S2-206ENST00000558806 SNAPC2Q13487 334 aa13.37□□□□□ -0.27
AP3S2-206ENST00000558806 NBPF11Q86T75 865 aa13.37□□□□□ -0.27
AP3S2-206ENST00000558806 ZKSCAN4Q969J2 545 aaPredicted RBP13.37□□□□□ -0.27
AP3S2-206ENST00000558806 SMC4Q9NTJ3 1288 aa13.37□□□□□ -0.27
AP3S2-206ENST00000558806 RBBP6Q7Z6E9 1792 aaKnown RBP13.37□□□□□ -0.27
AP3S2-206ENST00000558806 IRF6O14896 467 aa13.36□□□□□ -0.27
AP3S2-206ENST00000558806 TLR2O60603 784 aa13.36□□□□□ -0.27
AP3S2-206ENST00000558806 UBTFL1P0CB47 393 aaPredicted RBP13.36□□□□□ -0.27
AP3S2-206ENST00000558806 CAP1Q01518 475 aa13.36□□□□□ -0.27
AP3S2-206ENST00000558806 PPIL2Q13356 520 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms