RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 TOB2Q14106 344 aaPredicted RBP15.44■□□□□ 0.06
SMAD3-207ENST00000558763 BLOC1S2Q6QNY1 142 aa15.44■□□□□ 0.06
SMAD3-207ENST00000558763 TCEANC2Q96MN5 208 aa15.44■□□□□ 0.06
SMAD3-207ENST00000558763 DUOX1Q9NRD9 1551 aa15.44■□□□□ 0.06
SMAD3-207ENST00000558763 GPAA1O43292 621 aa15.44■□□□□ 0.06
SMAD3-207ENST00000558763 NUCB2P80303 420 aa15.44■□□□□ 0.06
SMAD3-207ENST00000558763 KRT32Q14532 448 aa15.44■□□□□ 0.06
SMAD3-207ENST00000558763 WASHC4Q2M389 1173 aa15.44■□□□□ 0.06
SMAD3-207ENST00000558763 DALRD3Q5D0E6 543 aaKnown RBP15.44■□□□□ 0.06
SMAD3-207ENST00000558763 SLC9C2Q5TAH2 1124 aa15.44■□□□□ 0.06
SMAD3-207ENST00000558763 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.44■□□□□ 0.06
SMAD3-207ENST00000558763 ME3Q16798 604 aa15.43■□□□□ 0.06
SMAD3-207ENST00000558763 TTLL5Q6EMB2 1281 aa15.43■□□□□ 0.06
SMAD3-207ENST00000558763 DPP8Q6V1X1 898 aaPredicted RBP15.43■□□□□ 0.06
SMAD3-207ENST00000558763 MPNDQ8N594 471 aa15.43■□□□□ 0.06
SMAD3-207ENST00000558763 C7orf43Q8WVR3 580 aa15.43■□□□□ 0.06
SMAD3-207ENST00000558763 GGA1Q9UJY5 639 aa15.43■□□□□ 0.06
SMAD3-207ENST00000558763 TPCN1Q9ULQ1 816 aa15.43■□□□□ 0.06
SMAD3-207ENST00000558763 BCS1LQ9Y276 419 aa15.43■□□□□ 0.06
SMAD3-207ENST00000558763 ZNF532Q9HCE3 1301 aa15.42■□□□□ 0.06
SMAD3-207ENST00000558763 C6orf229H3BNL8 230 aa15.42■□□□□ 0.06
SMAD3-207ENST00000558763 IDH1O75874 414 aaKnown RBP15.42■□□□□ 0.06
SMAD3-207ENST00000558763 GYG1P46976 350 aa15.42■□□□□ 0.06
SMAD3-207ENST00000558763 SYT17Q9BSW7 474 aa15.42■□□□□ 0.06
SMAD3-207ENST00000558763 PODXL2Q9NZ53 605 aa15.42■□□□□ 0.06
SMAD3-207ENST00000558763 POLLQ9UGP5 575 aa15.42■□□□□ 0.06
SMAD3-207ENST00000558763 ZSCAN25Q6NSZ9 544 aa15.42■□□□□ 0.06
SMAD3-207ENST00000558763 TBC1D16Q8TBP0 767 aa15.42■□□□□ 0.06
SMAD3-207ENST00000558763 FAM84BQ96KN1 310 aaPredicted RBP15.42■□□□□ 0.06
SMAD3-207ENST00000558763 NEK1Q96PY6 1258 aa15.42■□□□□ 0.06
SMAD3-207ENST00000558763 LEMD3Q9Y2U8 911 aa15.42■□□□□ 0.06
SMAD3-207ENST00000558763 BRD1O95696 1058 aa15.41■□□□□ 0.06
SMAD3-207ENST00000558763 FGAP02671 866 aa15.41■□□□□ 0.06
SMAD3-207ENST00000558763 ATP2B4P23634 1241 aa15.41■□□□□ 0.06
SMAD3-207ENST00000558763 TXNRD3Q86VQ6 643 aa15.41■□□□□ 0.06
SMAD3-207ENST00000558763 SNED1Q8TER0 1413 aa15.41■□□□□ 0.06
SMAD3-207ENST00000558763 CCDC93Q567U6 631 aa15.4■□□□□ 0.06
SMAD3-207ENST00000558763 FBXO33Q7Z6M2 555 aa15.4■□□□□ 0.06
SMAD3-207ENST00000558763 SH2B1Q9NRF2 756 aaPredicted RBP15.4■□□□□ 0.06
SMAD3-207ENST00000558763 CHD4Q14839 1912 aa15.4■□□□□ 0.06
SMAD3-207ENST00000558763 E7EWF7 191 aa15.4■□□□□ 0.06
SMAD3-207ENST00000558763 BAG4O95429 457 aaKnown RBP15.4■□□□□ 0.06
SMAD3-207ENST00000558763 ZSCAN31Q96LW9 406 aaPredicted RBP15.4■□□□□ 0.06
SMAD3-207ENST00000558763 NBPF3Q9H094 633 aa15.4■□□□□ 0.06
SMAD3-207ENST00000558763 IQSEC3Q9UPP2 1182 aaPredicted RBP15.4■□□□□ 0.06
SMAD3-207ENST00000558763 EXOSC10Q01780 885 aaKnown RBP15.39■□□□□ 0.05
SMAD3-207ENST00000558763 CC2D2BQ6DHV5 1058 aa15.39■□□□□ 0.05
SMAD3-207ENST00000558763 VPS37DQ86XT2 251 aa15.39■□□□□ 0.05
SMAD3-207ENST00000558763 GBP4Q96PP9 640 aa15.39■□□□□ 0.05
SMAD3-207ENST00000558763 AGXT2Q9BYV1 514 aa15.39■□□□□ 0.05
SMAD3-207ENST00000558763 MAST2Q6P0Q8 1798 aa15.39■□□□□ 0.05
SMAD3-207ENST00000558763 DDX11L8A8MPP1 907 aa15.38■□□□□ 0.05
SMAD3-207ENST00000558763 RIMBP2O15034 1052 aa15.38■□□□□ 0.05
SMAD3-207ENST00000558763 ZBTB22O15209 634 aa15.38■□□□□ 0.05
SMAD3-207ENST00000558763 CAVIN4Q5BKX8 364 aa15.38■□□□□ 0.05
SMAD3-207ENST00000558763 CCDC83Q8IWF9 413 aa15.38■□□□□ 0.05
SMAD3-207ENST00000558763 MAGEB6Q8N7X4 407 aa15.38■□□□□ 0.05
SMAD3-207ENST00000558763 STRBPQ96SI9 672 aaKnown RBP15.38■□□□□ 0.05
SMAD3-207ENST00000558763 TIAM2Q8IVF5 1701 aa15.38■□□□□ 0.05
SMAD3-207ENST00000558763 MAP3K12Q12852 859 aa15.38■□□□□ 0.05
SMAD3-207ENST00000558763 ANKRD1Q15327 319 aa15.38■□□□□ 0.05
SMAD3-207ENST00000558763 ARFGEF1Q9Y6D6 1849 aa15.38■□□□□ 0.05
SMAD3-207ENST00000558763 SOGA3Q5TF21 947 aa15.37■□□□□ 0.05
SMAD3-207ENST00000558763 NECAB1Q8N987 351 aa15.37■□□□□ 0.05
SMAD3-207ENST00000558763 ZNF384Q8TF68 577 aa15.37■□□□□ 0.05
SMAD3-207ENST00000558763 EPB41L4AQ9HCS5 686 aaPredicted RBP15.37■□□□□ 0.05
SMAD3-207ENST00000558763 ZMYM6O95789 1325 aa15.37■□□□□ 0.05
SMAD3-207ENST00000558763 PDS5AQ29RF7 1337 aaKnown RBP15.37■□□□□ 0.05
SMAD3-207ENST00000558763 DTNBO60941 627 aa15.36■□□□□ 0.05
SMAD3-207ENST00000558763 HIBADHP31937 336 aaKnown RBP15.36■□□□□ 0.05
SMAD3-207ENST00000558763 Q6ZUG5 572 aa15.36■□□□□ 0.05
SMAD3-207ENST00000558763 DHX32Q7L7V1 743 aaKnown RBP15.36■□□□□ 0.05
SMAD3-207ENST00000558763 ADGRA1Q86SQ6 560 aa15.36■□□□□ 0.05
SMAD3-207ENST00000558763 RTKN2Q8IZC4 609 aa15.36■□□□□ 0.05
SMAD3-207ENST00000558763 CHAMP1Q96JM3 812 aa15.36■□□□□ 0.05
SMAD3-207ENST00000558763 CTNNA3Q9UI47 895 aa15.36■□□□□ 0.05
SMAD3-207ENST00000558763 TCHHQ07283 1943 aa15.36■□□□□ 0.05
SMAD3-207ENST00000558763 HMGB1P09429 215 aaKnown RBP15.36■□□□□ 0.05
SMAD3-207ENST00000558763 HAND2P61296 217 aa15.36■□□□□ 0.05
SMAD3-207ENST00000558763 NKX2-3Q8TAU0 364 aa15.36■□□□□ 0.05
SMAD3-207ENST00000558763 LRRC2Q9BYS8 371 aa15.36■□□□□ 0.05
SMAD3-207ENST00000558763 ZC3H12CQ9C0D7 883 aaKnown RBP15.36■□□□□ 0.05
SMAD3-207ENST00000558763 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.36■□□□□ 0.05
SMAD3-207ENST00000558763 MBD4O95243 580 aa15.35■□□□□ 0.05
SMAD3-207ENST00000558763 ALX1Q15699 326 aa15.35■□□□□ 0.05
SMAD3-207ENST00000558763 ZNF804AQ7Z570 1209 aa15.35■□□□□ 0.05
SMAD3-207ENST00000558763 MB21D2Q8IYB1 491 aaPredicted RBP15.35■□□□□ 0.05
SMAD3-207ENST00000558763 FBXL16Q8N461 479 aa15.35■□□□□ 0.05
SMAD3-207ENST00000558763 EYA3Q99504 573 aa15.35■□□□□ 0.05
SMAD3-207ENST00000558763 RTFDC1Q9BY42 306 aaPredicted RBP15.35■□□□□ 0.05
SMAD3-207ENST00000558763 GNL3LQ9NVN8 582 aaKnown RBP15.35■□□□□ 0.05
SMAD3-207ENST00000558763 FER1L6Q2WGJ9 1857 aa15.35■□□□□ 0.05
SMAD3-207ENST00000558763 CCDC88AQ3V6T2 1871 aa15.35■□□□□ 0.05
SMAD3-207ENST00000558763 SEMA3EO15041 775 aa15.35■□□□□ 0.05
SMAD3-207ENST00000558763 AOC3Q16853 763 aa15.35■□□□□ 0.05
SMAD3-207ENST00000558763 IMMTQ16891 758 aaKnown RBP15.35■□□□□ 0.05
SMAD3-207ENST00000558763 C15orf52Q6ZUT6 534 aaKnown RBP15.35■□□□□ 0.05
SMAD3-207ENST00000558763 TBC1D10CQ8IV04 446 aa15.35■□□□□ 0.05
SMAD3-207ENST00000558763 LCORLQ8N3X6 602 aa15.35■□□□□ 0.05
SMAD3-207ENST00000558763 AIDAQ96BJ3 306 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms