RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 SEC24BO95487 1268 aa17.89■□□□□ 0.45
VPS18-202ENST00000558474 LDHCP07864 332 aa17.89■□□□□ 0.45
VPS18-202ENST00000558474 MMP14P50281 582 aa17.89■□□□□ 0.45
VPS18-202ENST00000558474 NAA16Q6N069 864 aaPredicted RBP17.89■□□□□ 0.45
VPS18-202ENST00000558474 MRIQ9BWK5 157 aa17.89■□□□□ 0.45
VPS18-202ENST00000558474 MECOMQ03112 1051 aa17.88■□□□□ 0.45
VPS18-202ENST00000558474 DACT2Q5SW24 774 aa17.88■□□□□ 0.45
VPS18-202ENST00000558474 DZIP1Q86YF9 867 aaKnown RBP17.88■□□□□ 0.45
VPS18-202ENST00000558474 OSBP2Q969R2 916 aa17.88■□□□□ 0.45
VPS18-202ENST00000558474 FAM163AQ96GL9 167 aaPredicted RBP17.88■□□□□ 0.45
VPS18-202ENST00000558474 CCDC171Q6TFL3 1326 aa17.88■□□□□ 0.45
VPS18-202ENST00000558474 SBF1O95248 1867 aa17.87■□□□□ 0.45
VPS18-202ENST00000558474 YDJCA8MPS7 323 aa17.87■□□□□ 0.45
VPS18-202ENST00000558474 PRDX5P30044 214 aa17.87■□□□□ 0.45
VPS18-202ENST00000558474 USP26Q9BXU7 913 aa17.87■□□□□ 0.45
VPS18-202ENST00000558474 ANO2Q9NQ90 1003 aa17.87■□□□□ 0.45
VPS18-202ENST00000558474 RPAP1Q9BWH6 1393 aaPredicted RBP17.87■□□□□ 0.45
VPS18-202ENST00000558474 MYH2Q9UKX2 1941 aa17.86■□□□□ 0.45
VPS18-202ENST00000558474 VIL1P09327 827 aaKnown RBP17.86■□□□□ 0.45
VPS18-202ENST00000558474 GNAT2P19087 354 aa17.86■□□□□ 0.45
VPS18-202ENST00000558474 CYP7A1P22680 504 aa17.86■□□□□ 0.45
VPS18-202ENST00000558474 HDLBPQ00341 1268 aaKnown RBP17.86■□□□□ 0.45
VPS18-202ENST00000558474 ARHGAP27Q6ZUM4 889 aa17.86■□□□□ 0.45
VPS18-202ENST00000558474 DSCC1Q9BVC3 393 aa17.86■□□□□ 0.45
VPS18-202ENST00000558474 LSG1Q9H089 658 aaKnown RBP17.86■□□□□ 0.45
VPS18-202ENST00000558474 PUS7LQ9H0K6 701 aaKnown RBP17.86■□□□□ 0.45
VPS18-202ENST00000558474 COL4A5P29400 1685 aa17.86■□□□□ 0.45
VPS18-202ENST00000558474 LMNB1P20700 586 aa17.85■□□□□ 0.45
VPS18-202ENST00000558474 MAP4K1Q92918 833 aa17.85■□□□□ 0.45
VPS18-202ENST00000558474 AIDAQ96BJ3 306 aa17.85■□□□□ 0.45
VPS18-202ENST00000558474 SEC62Q99442 399 aaKnown RBP17.85■□□□□ 0.45
VPS18-202ENST00000558474 IL25Q9H293 177 aa17.85■□□□□ 0.45
VPS18-202ENST00000558474 JAG2Q9Y219 1238 aa17.85■□□□□ 0.45
VPS18-202ENST00000558474 M0R2C6 588 aa17.84■□□□□ 0.45
VPS18-202ENST00000558474 FZD9O00144 591 aa17.84■□□□□ 0.45
VPS18-202ENST00000558474 GPAA1O43292 621 aa17.84■□□□□ 0.45
VPS18-202ENST00000558474 GRIN3BO60391 1043 aa17.84■□□□□ 0.45
VPS18-202ENST00000558474 MCCP23508 829 aa17.84■□□□□ 0.45
VPS18-202ENST00000558474 RBM25P49756 843 aaKnown RBP17.84■□□□□ 0.45
VPS18-202ENST00000558474 PPP4CP60510 307 aa17.84■□□□□ 0.45
VPS18-202ENST00000558474 TNIP1Q15025 636 aa17.84■□□□□ 0.45
VPS18-202ENST00000558474 ZNF589Q86UQ0 364 aaPredicted RBP17.84■□□□□ 0.45
VPS18-202ENST00000558474 CERS5Q8N5B7 392 aa17.84■□□□□ 0.45
VPS18-202ENST00000558474 AGBL3Q8NEM8 1001 aa17.84■□□□□ 0.45
VPS18-202ENST00000558474 ZNF384Q8TF68 577 aa17.84■□□□□ 0.45
VPS18-202ENST00000558474 FBXW7Q969H0 707 aa17.84■□□□□ 0.45
VPS18-202ENST00000558474 TBC1D32Q96NH3 1257 aa17.84■□□□□ 0.45
VPS18-202ENST00000558474 C22orf23Q9BZE7 217 aa17.84■□□□□ 0.45
VPS18-202ENST00000558474 MROH7-TTC4A0A0A0MT08 1334 aa17.83■□□□□ 0.44
VPS18-202ENST00000558474 GAKO14976 1311 aa17.83■□□□□ 0.44
VPS18-202ENST00000558474 MAGEB6P1A0A0J9YX57 407 aa17.83■□□□□ 0.44
VPS18-202ENST00000558474 BAG3O95817 575 aa17.83■□□□□ 0.44
VPS18-202ENST00000558474 CHGBP05060 677 aa17.83■□□□□ 0.44
VPS18-202ENST00000558474 RASSF7Q02833 373 aa17.83■□□□□ 0.44
VPS18-202ENST00000558474 RSBN1LQ6PCB5 846 aaPredicted RBP17.83■□□□□ 0.44
VPS18-202ENST00000558474 HHIPL2Q6UWX4 724 aa17.83■□□□□ 0.44
VPS18-202ENST00000558474 STRBPQ96SI9 672 aaKnown RBP17.83■□□□□ 0.44
VPS18-202ENST00000558474 NOL10Q9BSC4 688 aaKnown RBP17.83■□□□□ 0.44
VPS18-202ENST00000558474 KCNQ5Q9NR82 932 aa17.83■□□□□ 0.44
VPS18-202ENST00000558474 ZMYM6O95789 1325 aa17.82■□□□□ 0.44
VPS18-202ENST00000558474 HSPD1P10809 573 aaKnown RBP17.82■□□□□ 0.44
VPS18-202ENST00000558474 PLCG2P16885 1265 aa17.82■□□□□ 0.44
VPS18-202ENST00000558474 YBX3P16989 372 aaKnown RBP eCLIP17.82■□□□□ 0.44
VPS18-202ENST00000558474 RPS12P25398 132 aaKnown RBP17.82■□□□□ 0.44
VPS18-202ENST00000558474 EIF6P56537 245 aaKnown RBP17.82■□□□□ 0.44
VPS18-202ENST00000558474 CIAPIN1Q6FI81 312 aa17.82■□□□□ 0.44
VPS18-202ENST00000558474 IL27Q8NEV9 243 aa17.82■□□□□ 0.44
VPS18-202ENST00000558474 RIOK1Q9BRS2 568 aaKnown RBP17.82■□□□□ 0.44
VPS18-202ENST00000558474 SERPINA10Q9UK55 444 aa17.82■□□□□ 0.44
VPS18-202ENST00000558474 TTF2Q9UNY4 1162 aaKnown RBP17.82■□□□□ 0.44
VPS18-202ENST00000558474 U3KPZ7 1027 aaPredicted RBP17.82■□□□□ 0.44
VPS18-202ENST00000558474 GPR75-ASB3A0A0A6YYF3 556 aa17.81■□□□□ 0.44
VPS18-202ENST00000558474 PATL2C9JE40 543 aaKnown RBP17.81■□□□□ 0.44
VPS18-202ENST00000558474 PSMD14O00487 310 aa17.81■□□□□ 0.44
VPS18-202ENST00000558474 MBD4O95243 580 aa17.81■□□□□ 0.44
VPS18-202ENST00000558474 ANAPC15P60006 121 aa17.81■□□□□ 0.44
VPS18-202ENST00000558474 CXCL9Q07325 125 aa17.81■□□□□ 0.44
VPS18-202ENST00000558474 ALX1Q15699 326 aa17.81■□□□□ 0.44
VPS18-202ENST00000558474 GRIK5Q16478 980 aa17.81■□□□□ 0.44
VPS18-202ENST00000558474 SLFNL1Q499Z3 407 aa17.81■□□□□ 0.44
VPS18-202ENST00000558474 GIMAP6Q6P9H5 292 aa17.81■□□□□ 0.44
VPS18-202ENST00000558474 ADGRA1Q86SQ6 560 aa17.81■□□□□ 0.44
VPS18-202ENST00000558474 TEKT1Q969V4 418 aa17.81■□□□□ 0.44
VPS18-202ENST00000558474 GMLQ99445 158 aa17.81■□□□□ 0.44
VPS18-202ENST00000558474 CTNNA3Q9UI47 895 aa17.81■□□□□ 0.44
VPS18-202ENST00000558474 HSPA4P34932 840 aa17.8■□□□□ 0.44
VPS18-202ENST00000558474 PRELPP51888 382 aa17.8■□□□□ 0.44
VPS18-202ENST00000558474 PTH1RQ03431 593 aa17.8■□□□□ 0.44
VPS18-202ENST00000558474 RNF20Q5VTR2 975 aa17.8■□□□□ 0.44
VPS18-202ENST00000558474 CCDC129Q6ZRS4 1044 aa17.8■□□□□ 0.44
VPS18-202ENST00000558474 IL17RAQ96F46 866 aa17.8■□□□□ 0.44
VPS18-202ENST00000558474 TSHZ2Q9NRE2 1034 aa17.8■□□□□ 0.44
VPS18-202ENST00000558474 HDAC9Q9UKV0 1011 aa17.8■□□□□ 0.44
VPS18-202ENST00000558474 ZC3H4Q9UPT8 1303 aaKnown RBP17.79■□□□□ 0.44
VPS18-202ENST00000558474 RAD17O75943 681 aa17.79■□□□□ 0.44
VPS18-202ENST00000558474 NECTIN1Q15223 517 aa17.79■□□□□ 0.44
VPS18-202ENST00000558474 GPR162Q16538 588 aa17.79■□□□□ 0.44
VPS18-202ENST00000558474 KCNB2Q92953 911 aa17.79■□□□□ 0.44
VPS18-202ENST00000558474 ZDHHC15Q96MV8 337 aa17.79■□□□□ 0.44
VPS18-202ENST00000558474 CRNKL1Q9BZJ0 848 aaKnown RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms