RNA–Protein interactions for RNA: ENST00000558471.5

LRRC28-206, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-206ENST00000558471 ANGEL2Q5VTE6 544 aaKnown RBP15.31■□□□□ 0.04
LRRC28-206ENST00000558471 DCPSQ96C86 337 aaKnown RBP15.31■□□□□ 0.04
LRRC28-206ENST00000558471 GLIS2Q9BZE0 524 aaPredicted RBP15.31■□□□□ 0.04
LRRC28-206ENST00000558471 GGA3Q9NZ52 723 aa15.31■□□□□ 0.04
LRRC28-206ENST00000558471 SERPINA10Q9UK55 444 aa15.31■□□□□ 0.04
LRRC28-206ENST00000558471 PASKQ96RG2 1323 aa15.31■□□□□ 0.04
LRRC28-206ENST00000558471 ECM29Q5VYK3 1845 aa15.31■□□□□ 0.04
LRRC28-206ENST00000558471 MYO5AQ9Y4I1 1855 aaKnown RBP15.31■□□□□ 0.04
LRRC28-206ENST00000558471 SPDYE2BA6NHP3 402 aa15.3■□□□□ 0.04
LRRC28-206ENST00000558471 TRAF5O00463 557 aa15.3■□□□□ 0.04
LRRC28-206ENST00000558471 IGHDP01880 384 aa15.3■□□□□ 0.04
LRRC28-206ENST00000558471 LDHBP07195 334 aaKnown RBP15.3■□□□□ 0.04
LRRC28-206ENST00000558471 SPDYE6P0CI01 402 aa15.3■□□□□ 0.04
LRRC28-206ENST00000558471 HSPA6P17066 643 aa15.3■□□□□ 0.04
LRRC28-206ENST00000558471 AOX1Q06278 1338 aa15.3■□□□□ 0.04
LRRC28-206ENST00000558471 DLK2Q6UY11 383 aa15.3■□□□□ 0.04
LRRC28-206ENST00000558471 TBC1D9Q6ZT07 1266 aa15.3■□□□□ 0.04
LRRC28-206ENST00000558471 CDC37L1Q7L3B6 337 aa15.3■□□□□ 0.04
LRRC28-206ENST00000558471 USP48Q86UV5 1035 aa15.3■□□□□ 0.04
LRRC28-206ENST00000558471 ZGPATQ8N5A5 531 aaKnown RBP15.3■□□□□ 0.04
LRRC28-206ENST00000558471 MRIQ9BWK5 157 aa15.3■□□□□ 0.04
LRRC28-206ENST00000558471 ABCF2Q9UG63 623 aa15.3■□□□□ 0.04
LRRC28-206ENST00000558471 SCAF8Q9UPN6 1271 aaKnown RBP15.3■□□□□ 0.04
LRRC28-206ENST00000558471 MYH2Q9UKX2 1941 aa15.29■□□□□ 0.04
LRRC28-206ENST00000558471 MAST3O60307 1309 aa15.29■□□□□ 0.04
LRRC28-206ENST00000558471 KRT26Q7Z3Y9 468 aa15.29■□□□□ 0.04
LRRC28-206ENST00000558471 TEKT1Q969V4 418 aa15.29■□□□□ 0.04
LRRC28-206ENST00000558471 RWDD1Q9H446 243 aaPredicted RBP15.29■□□□□ 0.04
LRRC28-206ENST00000558471 TRPM7Q96QT4 1865 aa15.29■□□□□ 0.04
LRRC28-206ENST00000558471 PITPNM2Q9BZ72 1349 aa15.28■□□□□ 0.04
LRRC28-206ENST00000558471 CYP2E1P05181 493 aaPredicted RBP15.28■□□□□ 0.04
LRRC28-206ENST00000558471 ZAP70P43403 619 aa15.28■□□□□ 0.04
LRRC28-206ENST00000558471 APLP1P51693 650 aa15.28■□□□□ 0.04
LRRC28-206ENST00000558471 DIXDC1Q155Q3 683 aa15.28■□□□□ 0.04
LRRC28-206ENST00000558471 SPTY2D1Q68D10 685 aaPredicted RBP15.28■□□□□ 0.04
LRRC28-206ENST00000558471 HHIPL2Q6UWX4 724 aa15.28■□□□□ 0.04
LRRC28-206ENST00000558471 ERICH6Q7L0X2 663 aa15.28■□□□□ 0.04
LRRC28-206ENST00000558471 GCC1Q96CN9 775 aa15.28■□□□□ 0.04
LRRC28-206ENST00000558471 CLRN2A0PK11 232 aa15.27■□□□□ 0.04
LRRC28-206ENST00000558471 ADM5C9JUS6 153 aa15.27■□□□□ 0.04
LRRC28-206ENST00000558471 SULF1Q8IWU6 871 aa15.27■□□□□ 0.04
LRRC28-206ENST00000558471 ZDHHC15Q96MV8 337 aa15.27■□□□□ 0.04
LRRC28-206ENST00000558471 TDRD3Q9H7E2 651 aaKnown RBP15.27■□□□□ 0.04
LRRC28-206ENST00000558471 NDUFB9Q9Y6M9 179 aa15.27■□□□□ 0.04
LRRC28-206ENST00000558471 MYO1BO43795 1136 aa15.26■□□□□ 0.03
LRRC28-206ENST00000558471 MECOMQ03112 1051 aa15.26■□□□□ 0.03
LRRC28-206ENST00000558471 ANKRD45Q5TZF3 282 aa15.26■□□□□ 0.03
LRRC28-206ENST00000558471 APOBEC3HQ6NTF7 200 aaKnown RBP15.26■□□□□ 0.03
LRRC28-206ENST00000558471 DZIP1Q86YF9 867 aaKnown RBP15.26■□□□□ 0.03
LRRC28-206ENST00000558471 SMC5Q8IY18 1101 aa15.26■□□□□ 0.03
LRRC28-206ENST00000558471 ZNF384Q8TF68 577 aa15.26■□□□□ 0.03
LRRC28-206ENST00000558471 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.26■□□□□ 0.03
LRRC28-206ENST00000558471 LRP2BPQ9P2M1 347 aa15.26■□□□□ 0.03
LRRC28-206ENST00000558471 ZNF70Q9UC06 446 aaPredicted RBP15.26■□□□□ 0.03
LRRC28-206ENST00000558471 ATP5JP18859 108 aa15.25■□□□□ 0.03
LRRC28-206ENST00000558471 HTRA3P83110 453 aa15.25■□□□□ 0.03
LRRC28-206ENST00000558471 SPDYE2Q495Y8 402 aa15.25■□□□□ 0.03
LRRC28-206ENST00000558471 CST9Q5W186 159 aa15.25■□□□□ 0.03
LRRC28-206ENST00000558471 NSUN4Q96CB9 384 aaKnown RBP15.25■□□□□ 0.03
LRRC28-206ENST00000558471 ANTXR1Q9H6X2 564 aa15.25■□□□□ 0.03
LRRC28-206ENST00000558471 PIH1D3Q9NQM4 214 aaKnown RBP15.25■□□□□ 0.03
LRRC28-206ENST00000558471 RAI14Q9P0K7 980 aa15.25■□□□□ 0.03
LRRC28-206ENST00000558471 DAGLAQ9Y4D2 1042 aa15.25■□□□□ 0.03
LRRC28-206ENST00000558471 PRAMEF18Q5VWM3 479 aa15.24■□□□□ 0.03
LRRC28-206ENST00000558471 B4GALNT3Q6L9W6 998 aa15.24■□□□□ 0.03
LRRC28-206ENST00000558471 APOBEC3FQ8IUX4 373 aaKnown RBP15.24■□□□□ 0.03
LRRC28-206ENST00000558471 OTUD7AQ8TE49 926 aaPredicted RBP15.24■□□□□ 0.03
LRRC28-206ENST00000558471 FAM163AQ96GL9 167 aaPredicted RBP15.24■□□□□ 0.03
LRRC28-206ENST00000558471 BOLA2Q9H3K6 86 aa15.24■□□□□ 0.03
LRRC28-206ENST00000558471 VEZTQ9HBM0 779 aa15.24■□□□□ 0.03
LRRC28-206ENST00000558471 ECHDC1Q9NTX5 307 aa15.24■□□□□ 0.03
LRRC28-206ENST00000558471 DOCK2Q92608 1830 aa15.23■□□□□ 0.03
LRRC28-206ENST00000558471 TMEM88BA6NKF7 163 aa15.23■□□□□ 0.03
LRRC28-206ENST00000558471 CELF2O95319 508 aaKnown RBP15.23■□□□□ 0.03
LRRC28-206ENST00000558471 CENPBP07199 599 aaPredicted RBP15.23■□□□□ 0.03
LRRC28-206ENST00000558471 SLF2Q8IX21 1173 aa15.23■□□□□ 0.03
LRRC28-206ENST00000558471 CDCA5Q96FF9 252 aa15.23■□□□□ 0.03
LRRC28-206ENST00000558471 DEFB129Q9H1M3 183 aa15.23■□□□□ 0.03
LRRC28-206ENST00000558471 ZNF408Q9H9D4 720 aa15.23■□□□□ 0.03
LRRC28-206ENST00000558471 ZBTB47Q9UFB7 747 aaPredicted RBP15.23■□□□□ 0.03
LRRC28-206ENST00000558471 GAKO14976 1311 aa15.22■□□□□ 0.03
LRRC28-206ENST00000558471 CACNB3P54284 484 aa15.22■□□□□ 0.03
LRRC28-206ENST00000558471 TSHZ3Q63HK5 1081 aa15.22■□□□□ 0.03
LRRC28-206ENST00000558471 CDC42EP5Q6NZY7 148 aa15.22■□□□□ 0.03
LRRC28-206ENST00000558471 EDC3Q96F86 508 aaKnown RBP15.22■□□□□ 0.03
LRRC28-206ENST00000558471 DNAJC2Q99543 621 aaKnown RBP15.22■□□□□ 0.03
LRRC28-206ENST00000558471 HAUS7Q99871 368 aa15.22■□□□□ 0.03
LRRC28-206ENST00000558471 CREBZFQ9NS37 354 aa15.22■□□□□ 0.03
LRRC28-206ENST00000558471 MROH7-TTC4A0A0A0MT08 1334 aa15.21■□□□□ 0.03
LRRC28-206ENST00000558471 GPR75-ASB3A0A0A6YYF3 556 aa15.21■□□□□ 0.03
LRRC28-206ENST00000558471 TCP10L2B9ZVM9 353 aa15.21■□□□□ 0.03
LRRC28-206ENST00000558471 GOLIM4O00461 696 aa15.21■□□□□ 0.03
LRRC28-206ENST00000558471 IDH1O75874 414 aaKnown RBP15.21■□□□□ 0.03
LRRC28-206ENST00000558471 LDHCP07864 332 aa15.21■□□□□ 0.03
LRRC28-206ENST00000558471 GSTO1P78417 241 aa15.21■□□□□ 0.03
LRRC28-206ENST00000558471 RASA3Q14644 834 aa15.21■□□□□ 0.03
LRRC28-206ENST00000558471 NAA16Q6N069 864 aaPredicted RBP15.21■□□□□ 0.03
LRRC28-206ENST00000558471 USP40Q9NVE5 1235 aa15.21■□□□□ 0.03
LRRC28-206ENST00000558471 MAST2Q6P0Q8 1798 aa15.21■□□□□ 0.02
LRRC28-206ENST00000558471 SALL3Q9BXA9 1300 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms