RNA–Protein interactions for RNA: ENST00000558321.5

CDC42BPB-202, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 528 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-202ENST00000558321 CSRNP1Q96S65 589 aa15.37■□□□□ 0.05
CDC42BPB-202ENST00000558321 COPRSQ9NQ92 184 aa15.37■□□□□ 0.05
CDC42BPB-202ENST00000558321 GNL3LQ9NVN8 582 aaKnown RBP15.37■□□□□ 0.05
CDC42BPB-202ENST00000558321 ZNF70Q9UC06 446 aaPredicted RBP15.37■□□□□ 0.05
CDC42BPB-202ENST00000558321 TRPA1O75762 1119 aa15.36■□□□□ 0.05
CDC42BPB-202ENST00000558321 FTSJ3Q8IY81 847 aaKnown RBP15.36■□□□□ 0.05
CDC42BPB-202ENST00000558321 REM2Q8IYK8 340 aaPredicted RBP15.36■□□□□ 0.05
CDC42BPB-202ENST00000558321 TMEM57Q8N5G2 664 aa15.36■□□□□ 0.05
CDC42BPB-202ENST00000558321 WDR66Q8TBY9 1149 aa15.36■□□□□ 0.05
CDC42BPB-202ENST00000558321 TEKT1Q969V4 418 aa15.36■□□□□ 0.05
CDC42BPB-202ENST00000558321 PAPPA2Q9BXP8 1791 aa15.36■□□□□ 0.05
CDC42BPB-202ENST00000558321 COL1A1P02452 1464 aaPredicted RBP15.35■□□□□ 0.05
CDC42BPB-202ENST00000558321 TCP10L2B9ZVM9 353 aa15.35■□□□□ 0.05
CDC42BPB-202ENST00000558321 HDLBPQ00341 1268 aaKnown RBP15.35■□□□□ 0.05
CDC42BPB-202ENST00000558321 MKRN3Q13064 507 aaKnown RBP15.35■□□□□ 0.05
CDC42BPB-202ENST00000558321 SPDYE2Q495Y8 402 aa15.35■□□□□ 0.05
CDC42BPB-202ENST00000558321 NBPF12Q5TAG4 269 aaPredicted RBP15.35■□□□□ 0.05
CDC42BPB-202ENST00000558321 SLC10A4Q96EP9 437 aa15.35■□□□□ 0.05
CDC42BPB-202ENST00000558321 FZD1Q9UP38 647 aa15.35■□□□□ 0.05
CDC42BPB-202ENST00000558321 SUGT1Q9Y2Z0 365 aa15.35■□□□□ 0.05
CDC42BPB-202ENST00000558321 MAST3O60307 1309 aa15.35■□□□□ 0.05
CDC42BPB-202ENST00000558321 AOX1Q06278 1338 aa15.35■□□□□ 0.05
CDC42BPB-202ENST00000558321 ZBED9Q6R2W3 1325 aa15.35■□□□□ 0.05
CDC42BPB-202ENST00000558321 TNNI2P48788 182 aa15.34■□□□□ 0.05
CDC42BPB-202ENST00000558321 MTX1Q13505 466 aa15.34■□□□□ 0.05
CDC42BPB-202ENST00000558321 RNF186Q9NXI6 227 aa15.34■□□□□ 0.05
CDC42BPB-202ENST00000558321 AKAP2Q9Y2D5 859 aa15.34■□□□□ 0.05
CDC42BPB-202ENST00000558321 TIMM10P62072 90 aa15.33■□□□□ 0.04
CDC42BPB-202ENST00000558321 TFCP2Q12800 502 aa15.33■□□□□ 0.04
CDC42BPB-202ENST00000558321 G3BP1Q13283 466 aaKnown RBP eCLIP15.33■□□□□ 0.04
CDC42BPB-202ENST00000558321 LDLRAD1Q5T700 205 aa15.33■□□□□ 0.04
CDC42BPB-202ENST00000558321 MRIQ9BWK5 157 aa15.33■□□□□ 0.04
CDC42BPB-202ENST00000558321 SAGE1Q9NXZ1 904 aa15.33■□□□□ 0.04
CDC42BPB-202ENST00000558321 TMOD2Q9NZR1 351 aa15.33■□□□□ 0.04
CDC42BPB-202ENST00000558321 PHKA1P46020 1223 aa15.32■□□□□ 0.04
CDC42BPB-202ENST00000558321 IREB2P48200 963 aaKnown RBP15.32■□□□□ 0.04
CDC42BPB-202ENST00000558321 ITPRIPQ8IWB1 547 aa15.32■□□□□ 0.04
CDC42BPB-202ENST00000558321 ZDHHC15Q96MV8 337 aa15.32■□□□□ 0.04
CDC42BPB-202ENST00000558321 NEUROD6Q96NK8 337 aa15.32■□□□□ 0.04
CDC42BPB-202ENST00000558321 DENND2AQ9ULE3 1009 aa15.32■□□□□ 0.04
CDC42BPB-202ENST00000558321 PNMA6EA0A0J9YXQ4 647 aa15.31■□□□□ 0.04
CDC42BPB-202ENST00000558321 SEMA3EO15041 775 aa15.31■□□□□ 0.04
CDC42BPB-202ENST00000558321 LDHBP07195 334 aaKnown RBP15.31■□□□□ 0.04
CDC42BPB-202ENST00000558321 ADORA1P30542 326 aa15.31■□□□□ 0.04
CDC42BPB-202ENST00000558321 CACNB3P54284 484 aa15.31■□□□□ 0.04
CDC42BPB-202ENST00000558321 GORABQ5T7V8 394 aa15.31■□□□□ 0.04
CDC42BPB-202ENST00000558321 CCDC102BQ68D86 513 aa15.31■□□□□ 0.04
CDC42BPB-202ENST00000558321 HHIPL2Q6UWX4 724 aa15.31■□□□□ 0.04
CDC42BPB-202ENST00000558321 TMEM39BQ9GZU3 492 aa15.31■□□□□ 0.04
CDC42BPB-202ENST00000558321 A0A1B0GUL7 405 aa15.3■□□□□ 0.04
CDC42BPB-202ENST00000558321 USP2O75604 605 aaPredicted RBP15.3■□□□□ 0.04
CDC42BPB-202ENST00000558321 SREBF2Q12772 1141 aa15.3■□□□□ 0.04
CDC42BPB-202ENST00000558321 MAP3K11Q16584 847 aa15.3■□□□□ 0.04
CDC42BPB-202ENST00000558321 SPRYD7Q5W111 196 aa15.3■□□□□ 0.04
CDC42BPB-202ENST00000558321 XAGE2Q96GT9 111 aa15.3■□□□□ 0.04
CDC42BPB-202ENST00000558321 CLMNQ96JQ2 1002 aa15.3■□□□□ 0.04
CDC42BPB-202ENST00000558321 UNCXA6NJT0 531 aa15.29■□□□□ 0.04
CDC42BPB-202ENST00000558321 TM4SF4P48230 202 aa15.29■□□□□ 0.04
CDC42BPB-202ENST00000558321 OS9Q13438 667 aaPredicted RBP15.29■□□□□ 0.04
CDC42BPB-202ENST00000558321 MVPQ14764 893 aaKnown RBP15.29■□□□□ 0.04
CDC42BPB-202ENST00000558321 APOBEC3HQ6NTF7 200 aaKnown RBP15.29■□□□□ 0.04
CDC42BPB-202ENST00000558321 ANKRD13AQ8IZ07 590 aa15.29■□□□□ 0.04
CDC42BPB-202ENST00000558321 ZGPATQ8N5A5 531 aaKnown RBP15.29■□□□□ 0.04
CDC42BPB-202ENST00000558321 TBC1D8O95759 1140 aa15.28■□□□□ 0.04
CDC42BPB-202ENST00000558321 PRDX5P30044 214 aa15.28■□□□□ 0.04
CDC42BPB-202ENST00000558321 ATP8B2P98198 1209 aa15.28■□□□□ 0.04
CDC42BPB-202ENST00000558321 DGKZQ13574 1117 aa15.28■□□□□ 0.04
CDC42BPB-202ENST00000558321 ABHD8Q96I13 439 aa15.28■□□□□ 0.04
CDC42BPB-202ENST00000558321 TEPSINQ96N21 525 aa15.28■□□□□ 0.04
CDC42BPB-202ENST00000558321 C1orf115Q9H7X2 142 aa15.28■□□□□ 0.04
CDC42BPB-202ENST00000558321 ABCF2Q9UG63 623 aa15.28■□□□□ 0.04
CDC42BPB-202ENST00000558321 SSC5DA1L4H1 1573 aa15.28■□□□□ 0.04
CDC42BPB-202ENST00000558321 MANSC4A6NHS7 340 aaPredicted RBP15.27■□□□□ 0.04
CDC42BPB-202ENST00000558321 RLBP1P12271 317 aa15.27■□□□□ 0.04
CDC42BPB-202ENST00000558321 INHBEP58166 350 aa15.27■□□□□ 0.04
CDC42BPB-202ENST00000558321 DIXDC1Q155Q3 683 aa15.27■□□□□ 0.04
CDC42BPB-202ENST00000558321 FKBP1CQ5VVH2 108 aa15.27■□□□□ 0.04
CDC42BPB-202ENST00000558321 SPTY2D1Q68D10 685 aaPredicted RBP15.27■□□□□ 0.04
CDC42BPB-202ENST00000558321 CDAN1Q8IWY9 1227 aa15.27■□□□□ 0.04
CDC42BPB-202ENST00000558321 HOOK2Q96ED9 719 aa15.27■□□□□ 0.04
CDC42BPB-202ENST00000558321 WNK4Q96J92 1243 aa15.27■□□□□ 0.04
CDC42BPB-202ENST00000558321 DAGLAQ9Y4D2 1042 aa15.27■□□□□ 0.04
CDC42BPB-202ENST00000558321 SALL1Q9NSC2 1324 aa15.26■□□□□ 0.03
CDC42BPB-202ENST00000558321 ZBTB7BO15156 539 aaPredicted RBP15.26■□□□□ 0.03
CDC42BPB-202ENST00000558321 SURF6O75683 361 aaKnown RBP15.26■□□□□ 0.03
CDC42BPB-202ENST00000558321 ZBTB48P10074 688 aaPredicted RBP15.26■□□□□ 0.03
CDC42BPB-202ENST00000558321 MS4A1P11836 297 aa15.26■□□□□ 0.03
CDC42BPB-202ENST00000558321 MAP3K9P80192 1104 aa15.26■□□□□ 0.03
CDC42BPB-202ENST00000558321 RASGRF1Q13972 1273 aa15.26■□□□□ 0.03
CDC42BPB-202ENST00000558321 FAM83AQ86UY5 434 aa15.26■□□□□ 0.03
CDC42BPB-202ENST00000558321 DZIP1Q86YF9 867 aaKnown RBP15.26■□□□□ 0.03
CDC42BPB-202ENST00000558321 SLF2Q8IX21 1173 aa15.26■□□□□ 0.03
CDC42BPB-202ENST00000558321 MCOLN1Q9GZU1 580 aa15.26■□□□□ 0.03
CDC42BPB-202ENST00000558321 ELP3Q9H9T3 547 aa15.26■□□□□ 0.03
CDC42BPB-202ENST00000558321 USP40Q9NVE5 1235 aa15.26■□□□□ 0.03
CDC42BPB-202ENST00000558321 ECM29Q5VYK3 1845 aa15.26■□□□□ 0.03
CDC42BPB-202ENST00000558321 CCDC85CA6NKD9 419 aa15.25■□□□□ 0.03
CDC42BPB-202ENST00000558321 TCP10Q12799 353 aa15.25■□□□□ 0.03
CDC42BPB-202ENST00000558321 POLA2Q14181 598 aa15.25■□□□□ 0.03
CDC42BPB-202ENST00000558321 CDC42EP5Q6NZY7 148 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms