RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 NEXNQ0ZGT2 675 aa6.66□□□□□ -1.34
SPG11-208ENST00000558155 RALBP1Q15311 655 aa6.66□□□□□ -1.34
SPG11-208ENST00000558155 TAF1CQ15572 869 aaPredicted RBP6.66□□□□□ -1.34
SPG11-208ENST00000558155 CFAP100Q494V2 611 aa6.66□□□□□ -1.34
SPG11-208ENST00000558155 CCDC30Q5VVM6 783 aa6.66□□□□□ -1.34
SPG11-208ENST00000558155 PRMT6Q96LA8 375 aaPredicted RBP6.66□□□□□ -1.34
SPG11-208ENST00000558155 GREM2Q9H772 168 aa6.66□□□□□ -1.34
SPG11-208ENST00000558155 VEZTQ9HBM0 779 aa6.66□□□□□ -1.34
SPG11-208ENST00000558155 CD209Q9NNX6 404 aa6.66□□□□□ -1.34
SPG11-208ENST00000558155 PTCH2Q9Y6C5 1203 aa6.66□□□□□ -1.34
SPG11-208ENST00000558155 CLRN2A0PK11 232 aa6.65□□□□□ -1.34
SPG11-208ENST00000558155 F8W031 263 aaPredicted RBP6.65□□□□□ -1.34
SPG11-208ENST00000558155 MYCP01106 439 aaPredicted RBP6.65□□□□□ -1.34
SPG11-208ENST00000558155 GJA5P36382 358 aa6.65□□□□□ -1.34
SPG11-208ENST00000558155 FKBP1AP62942 108 aaKnown RBP6.65□□□□□ -1.34
SPG11-208ENST00000558155 MAP3K9P80192 1104 aa6.65□□□□□ -1.34
SPG11-208ENST00000558155 CALD1Q05682 793 aaKnown RBP6.65□□□□□ -1.34
SPG11-208ENST00000558155 TNFAIP1Q13829 316 aa6.65□□□□□ -1.34
SPG11-208ENST00000558155 RASA3Q14644 834 aa6.65□□□□□ -1.34
SPG11-208ENST00000558155 KSR2Q6VAB6 950 aa6.65□□□□□ -1.34
SPG11-208ENST00000558155 CCDC146Q8IYE0 955 aa6.65□□□□□ -1.34
SPG11-208ENST00000558155 NKX2-3Q8TAU0 364 aa6.65□□□□□ -1.34
SPG11-208ENST00000558155 OPTNQ96CV9 577 aa6.65□□□□□ -1.34
SPG11-208ENST00000558155 MS4A4AQ96JQ5 239 aa6.65□□□□□ -1.34
SPG11-208ENST00000558155 ELP3Q9H9T3 547 aa6.65□□□□□ -1.34
SPG11-208ENST00000558155 MBIPQ9NS73 344 aa6.65□□□□□ -1.34
SPG11-208ENST00000558155 MAP3K2Q9Y2U5 619 aa6.65□□□□□ -1.34
SPG11-208ENST00000558155 NR2E3Q9Y5X4 410 aa6.65□□□□□ -1.34
SPG11-208ENST00000558155 CCL15-CCL14A0A0B4J2E2 113 aa6.64□□□□□ -1.35
SPG11-208ENST00000558155 PI4KAP2A4QPH2 592 aa6.64□□□□□ -1.35
SPG11-208ENST00000558155 H7C1W4 665 aa6.64□□□□□ -1.35
SPG11-208ENST00000558155 ZNF853P0CG23 659 aa6.64□□□□□ -1.35
SPG11-208ENST00000558155 ITGA6P23229 1130 aa6.64□□□□□ -1.35
SPG11-208ENST00000558155 HOXD10P28358 340 aa6.64□□□□□ -1.35
SPG11-208ENST00000558155 TNNI2P48788 182 aa6.64□□□□□ -1.35
SPG11-208ENST00000558155 GNAI1P63096 354 aa6.64□□□□□ -1.35
SPG11-208ENST00000558155 CHRNDQ07001 517 aa6.64□□□□□ -1.35
SPG11-208ENST00000558155 WDR43Q15061 677 aaKnown RBP eCLIP6.64□□□□□ -1.35
SPG11-208ENST00000558155 CCL15Q16663 113 aa6.64□□□□□ -1.35
SPG11-208ENST00000558155 C15orf52Q6ZUT6 534 aaKnown RBP6.64□□□□□ -1.35
SPG11-208ENST00000558155 ZNF804AQ7Z570 1209 aa6.64□□□□□ -1.35
SPG11-208ENST00000558155 PI4KAP1Q8N8J0 262 aa6.64□□□□□ -1.35
SPG11-208ENST00000558155 HELBQ8NG08 1087 aaPredicted RBP6.64□□□□□ -1.35
SPG11-208ENST00000558155 HTATIP2Q9BUP3 242 aa6.64□□□□□ -1.35
SPG11-208ENST00000558155 IFT57Q9NWB7 429 aa6.64□□□□□ -1.35
SPG11-208ENST00000558155 RBM27Q9P2N5 1060 aaKnown RBP6.64□□□□□ -1.35
SPG11-208ENST00000558155 CSADQ9Y600 493 aa6.64□□□□□ -1.35
SPG11-208ENST00000558155 ANKRD18BA2A2Z9 1011 aa6.63□□□□□ -1.35
SPG11-208ENST00000558155 TLR2O60603 784 aa6.63□□□□□ -1.35
SPG11-208ENST00000558155 IGKV5-2P06315 115 aa6.63□□□□□ -1.35
SPG11-208ENST00000558155 CSF1RP07333 972 aa6.63□□□□□ -1.35
SPG11-208ENST00000558155 MYH3P11055 1940 aa6.63□□□□□ -1.35
SPG11-208ENST00000558155 CETPP11597 493 aa6.63□□□□□ -1.35
SPG11-208ENST00000558155 IL1R1P14778 569 aa6.63□□□□□ -1.35
SPG11-208ENST00000558155 KLRK1P26718 216 aa6.63□□□□□ -1.35
SPG11-208ENST00000558155 LACTBP83111 547 aaPredicted RBP6.63□□□□□ -1.35
SPG11-208ENST00000558155 CAP1Q01518 475 aa6.63□□□□□ -1.35
SPG11-208ENST00000558155 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.63□□□□□ -1.35
SPG11-208ENST00000558155 UBE3BQ7Z3V4 1068 aa6.63□□□□□ -1.35
SPG11-208ENST00000558155 CERS5Q8N5B7 392 aa6.63□□□□□ -1.35
SPG11-208ENST00000558155 SH3TC2Q8TF17 1288 aa6.63□□□□□ -1.35
SPG11-208ENST00000558155 BRI3BPQ8WY22 251 aa6.63□□□□□ -1.35
SPG11-208ENST00000558155 HS3ST6Q96QI5 342 aa6.63□□□□□ -1.35
SPG11-208ENST00000558155 PLA2G12BQ9BX93 195 aa6.63□□□□□ -1.35
SPG11-208ENST00000558155 ZCCHC17Q9NP64 241 aaKnown RBP6.63□□□□□ -1.35
SPG11-208ENST00000558155 ZNF70Q9UC06 446 aaPredicted RBP6.63□□□□□ -1.35
SPG11-208ENST00000558155 PCDHAC2Q9Y5I4 1007 aa6.63□□□□□ -1.35
SPG11-208ENST00000558155 NEURL1BA8MQ27 555 aa6.62□□□□□ -1.35
SPG11-208ENST00000558155 TAF5LO75529 589 aa6.62□□□□□ -1.35
SPG11-208ENST00000558155 GJB1P08034 283 aa6.62□□□□□ -1.35
SPG11-208ENST00000558155 CAPN2P17655 700 aa6.62□□□□□ -1.35
SPG11-208ENST00000558155 EMP3P54852 163 aa6.62□□□□□ -1.35
SPG11-208ENST00000558155 UBXN2AP68543 259 aa6.62□□□□□ -1.35
SPG11-208ENST00000558155 CWF19L2Q2TBE0 894 aaKnown RBP6.62□□□□□ -1.35
SPG11-208ENST00000558155 ERO1BQ86YB8 467 aa6.62□□□□□ -1.35
SPG11-208ENST00000558155 FAM43AQ8N2R8 423 aa6.62□□□□□ -1.35
SPG11-208ENST00000558155 C8orf58Q8NAV2 365 aa6.62□□□□□ -1.35
SPG11-208ENST00000558155 RAET1EQ8TD07 263 aa6.62□□□□□ -1.35
SPG11-208ENST00000558155 HOOK2Q96ED9 719 aa6.62□□□□□ -1.35
SPG11-208ENST00000558155 TRIM47Q96LD4 638 aa6.62□□□□□ -1.35
SPG11-208ENST00000558155 STK31Q9BXU1 1019 aa6.62□□□□□ -1.35
SPG11-208ENST00000558155 BIN2Q9UBW5 565 aaPredicted RBP6.62□□□□□ -1.35
SPG11-208ENST00000558155 SERPINA10Q9UK55 444 aa6.62□□□□□ -1.35
SPG11-208ENST00000558155 ADAMTS8Q9UP79 889 aa6.62□□□□□ -1.35
SPG11-208ENST00000558155 TRIOBPQ9H2D6 2365 aa6.62□□□□□ -1.35
SPG11-208ENST00000558155 ECM29Q5VYK3 1845 aa6.62□□□□□ -1.35
SPG11-208ENST00000558155 LAMB1P07942 1786 aa6.62□□□□□ -1.35
SPG11-208ENST00000558155 SSC5DA1L4H1 1573 aa6.61□□□□□ -1.35
SPG11-208ENST00000558155 A0A1W2PPC1 479 aa6.61□□□□□ -1.35
SPG11-208ENST00000558155 TCP10L2B9ZVM9 353 aa6.61□□□□□ -1.35
SPG11-208ENST00000558155 BTBD19C9JJ37 291 aa6.61□□□□□ -1.35
SPG11-208ENST00000558155 FMNL1O95466 1100 aaPredicted RBP6.61□□□□□ -1.35
SPG11-208ENST00000558155 GRK4P32298 578 aa6.61□□□□□ -1.35
SPG11-208ENST00000558155 PSMC4P43686 418 aa6.61□□□□□ -1.35
SPG11-208ENST00000558155 GJA8P48165 433 aa6.61□□□□□ -1.35
SPG11-208ENST00000558155 IFIT5Q13325 482 aaKnown RBP6.61□□□□□ -1.35
SPG11-208ENST00000558155 SNAPC2Q13487 334 aa6.61□□□□□ -1.35
SPG11-208ENST00000558155 VGLL4Q14135 290 aa6.61□□□□□ -1.35
SPG11-208ENST00000558155 GCKRQ14397 625 aa6.61□□□□□ -1.35
SPG11-208ENST00000558155 DZIP1LQ8IYY4 767 aaKnown RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms