RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 CHGBP05060 677 aa20.26■□□□□ 0.83
SNX1-203ENST00000558040 MECOMQ03112 1051 aa20.26■□□□□ 0.83
SNX1-203ENST00000558040 SLF2Q8IX21 1173 aa20.26■□□□□ 0.83
SNX1-203ENST00000558040 OSBP2Q969R2 916 aa20.26■□□□□ 0.83
SNX1-203ENST00000558040 NSUN4Q96CB9 384 aaKnown RBP20.26■□□□□ 0.83
SNX1-203ENST00000558040 IL25Q9H293 177 aa20.26■□□□□ 0.83
SNX1-203ENST00000558040 ZNRF3Q9ULT6 936 aa20.26■□□□□ 0.83
SNX1-203ENST00000558040 M0R2C6 588 aa20.25■□□□□ 0.83
SNX1-203ENST00000558040 LDHCP07864 332 aa20.25■□□□□ 0.83
SNX1-203ENST00000558040 RASSF7Q02833 373 aa20.25■□□□□ 0.83
SNX1-203ENST00000558040 SLFNL1Q499Z3 407 aa20.25■□□□□ 0.83
SNX1-203ENST00000558040 ARHGAP27Q6ZUM4 889 aa20.25■□□□□ 0.83
SNX1-203ENST00000558040 AIDAQ96BJ3 306 aa20.25■□□□□ 0.83
SNX1-203ENST00000558040 SEC62Q99442 399 aaKnown RBP20.25■□□□□ 0.83
SNX1-203ENST00000558040 YDJCA8MPS7 323 aa20.24■□□□□ 0.83
SNX1-203ENST00000558040 MCCP23508 829 aa20.24■□□□□ 0.83
SNX1-203ENST00000558040 ZNF589Q86UQ0 364 aaPredicted RBP20.24■□□□□ 0.83
SNX1-203ENST00000558040 USP26Q9BXU7 913 aa20.24■□□□□ 0.83
SNX1-203ENST00000558040 C22orf23Q9BZE7 217 aa20.24■□□□□ 0.83
SNX1-203ENST00000558040 PUS7LQ9H0K6 701 aaKnown RBP20.24■□□□□ 0.83
SNX1-203ENST00000558040 TSHZ2Q9NRE2 1034 aa20.24■□□□□ 0.83
SNX1-203ENST00000558040 MYO3BQ8WXR4 1341 aa20.24■□□□□ 0.83
SNX1-203ENST00000558040 DACT2Q5SW24 774 aa20.23■□□□□ 0.83
SNX1-203ENST00000558040 CCDC129Q6ZRS4 1044 aa20.23■□□□□ 0.83
SNX1-203ENST00000558040 NOL10Q9BSC4 688 aaKnown RBP20.23■□□□□ 0.83
SNX1-203ENST00000558040 LSG1Q9H089 658 aaKnown RBP20.23■□□□□ 0.83
SNX1-203ENST00000558040 COL4A5P29400 1685 aa20.22■□□□□ 0.83
SNX1-203ENST00000558040 GPAA1O43292 621 aa20.22■□□□□ 0.83
SNX1-203ENST00000558040 TBC1D32Q96NH3 1257 aa20.22■□□□□ 0.83
SNX1-203ENST00000558040 KCNQ5Q9NR82 932 aa20.22■□□□□ 0.83
SNX1-203ENST00000558040 SCN9AQ15858 1988 aa20.22■□□□□ 0.83
SNX1-203ENST00000558040 PSME4Q14997 1843 aa20.22■□□□□ 0.83
SNX1-203ENST00000558040 MAGEB6P1A0A0J9YX57 407 aa20.21■□□□□ 0.83
SNX1-203ENST00000558040 MBD4O95243 580 aa20.21■□□□□ 0.83
SNX1-203ENST00000558040 GNAT2P19087 354 aa20.21■□□□□ 0.83
SNX1-203ENST00000558040 LMNB1P20700 586 aa20.21■□□□□ 0.83
SNX1-203ENST00000558040 CERS3Q8IU89 383 aa20.21■□□□□ 0.83
SNX1-203ENST00000558040 CERS5Q8N5B7 392 aa20.21■□□□□ 0.83
SNX1-203ENST00000558040 ZNF384Q8TF68 577 aa20.21■□□□□ 0.83
SNX1-203ENST00000558040 DSCC1Q9BVC3 393 aa20.21■□□□□ 0.83
SNX1-203ENST00000558040 RAD17O75943 681 aa20.2■□□□□ 0.82
SNX1-203ENST00000558040 YBX3P16989 372 aaKnown RBP eCLIP20.2■□□□□ 0.82
SNX1-203ENST00000558040 TNIP1Q15025 636 aa20.2■□□□□ 0.82
SNX1-203ENST00000558040 GRIK5Q16478 980 aa20.2■□□□□ 0.82
SNX1-203ENST00000558040 MIGA1Q8NAN2 632 aa20.2■□□□□ 0.82
SNX1-203ENST00000558040 TTF2Q9UNY4 1162 aaKnown RBP20.2■□□□□ 0.82
SNX1-203ENST00000558040 MROH7-TTC4A0A0A0MT08 1334 aa20.2■□□□□ 0.82
SNX1-203ENST00000558040 ZNF646O15015 1829 aaPredicted RBP20.19■□□□□ 0.82
SNX1-203ENST00000558040 BAG3O95817 575 aa20.19■□□□□ 0.82
SNX1-203ENST00000558040 VIL1P09327 827 aaKnown RBP20.19■□□□□ 0.82
SNX1-203ENST00000558040 RBM25P49756 843 aaKnown RBP20.19■□□□□ 0.82
SNX1-203ENST00000558040 PTH1RQ03431 593 aa20.19■□□□□ 0.82
SNX1-203ENST00000558040 CIAPIN1Q6FI81 312 aa20.19■□□□□ 0.82
SNX1-203ENST00000558040 RSBN1LQ6PCB5 846 aaPredicted RBP20.19■□□□□ 0.82
SNX1-203ENST00000558040 ADGRA1Q86SQ6 560 aa20.19■□□□□ 0.82
SNX1-203ENST00000558040 MAP4K1Q92918 833 aa20.19■□□□□ 0.82
SNX1-203ENST00000558040 FAM163AQ96GL9 167 aaPredicted RBP20.19■□□□□ 0.82
SNX1-203ENST00000558040 STRBPQ96SI9 672 aaKnown RBP20.19■□□□□ 0.82
SNX1-203ENST00000558040 U3KPZ7 1027 aaPredicted RBP20.19■□□□□ 0.82
SNX1-203ENST00000558040 F8W031 263 aaPredicted RBP20.18■□□□□ 0.82
SNX1-203ENST00000558040 PSMD14O00487 310 aa20.18■□□□□ 0.82
SNX1-203ENST00000558040 HSPD1P10809 573 aaKnown RBP20.18■□□□□ 0.82
SNX1-203ENST00000558040 EIF6P56537 245 aaKnown RBP20.18■□□□□ 0.82
SNX1-203ENST00000558040 DIXDC1Q155Q3 683 aa20.18■□□□□ 0.82
SNX1-203ENST00000558040 GPR162Q16538 588 aa20.18■□□□□ 0.82
SNX1-203ENST00000558040 MXD3Q9BW11 206 aa20.18■□□□□ 0.82
SNX1-203ENST00000558040 ARMT1Q9H993 441 aa20.18■□□□□ 0.82
SNX1-203ENST00000558040 RPAP1Q9BWH6 1393 aaPredicted RBP20.18■□□□□ 0.82
SNX1-203ENST00000558040 PLCG2P16885 1265 aa20.17■□□□□ 0.82
SNX1-203ENST00000558040 HDLBPQ00341 1268 aaKnown RBP20.17■□□□□ 0.82
SNX1-203ENST00000558040 CXCL9Q07325 125 aa20.17■□□□□ 0.82
SNX1-203ENST00000558040 KIAA0825Q8IV33 1275 aa20.17■□□□□ 0.82
SNX1-203ENST00000558040 LCORLQ8N3X6 602 aa20.17■□□□□ 0.82
SNX1-203ENST00000558040 TEKT1Q969V4 418 aa20.17■□□□□ 0.82
SNX1-203ENST00000558040 RIOK1Q9BRS2 568 aaKnown RBP20.17■□□□□ 0.82
SNX1-203ENST00000558040 MRIQ9BWK5 157 aa20.17■□□□□ 0.82
SNX1-203ENST00000558040 RBM8AQ9Y5S9 174 aaKnown RBP20.17■□□□□ 0.82
SNX1-203ENST00000558040 GAKO14976 1311 aa20.17■□□□□ 0.82
SNX1-203ENST00000558040 MYH2Q9UKX2 1941 aa20.16■□□□□ 0.82
SNX1-203ENST00000558040 FZD9O00144 591 aa20.16■□□□□ 0.82
SNX1-203ENST00000558040 GRIN3BO60391 1043 aa20.16■□□□□ 0.82
SNX1-203ENST00000558040 HSPA4P34932 840 aa20.16■□□□□ 0.82
SNX1-203ENST00000558040 PRELPP51888 382 aa20.16■□□□□ 0.82
SNX1-203ENST00000558040 RNF20Q5VTR2 975 aa20.16■□□□□ 0.82
SNX1-203ENST00000558040 HHIPL2Q6UWX4 724 aa20.16■□□□□ 0.82
SNX1-203ENST00000558040 AGBL3Q8NEM8 1001 aa20.16■□□□□ 0.82
SNX1-203ENST00000558040 CRNKL1Q9BZJ0 848 aaKnown RBP20.16■□□□□ 0.82
SNX1-203ENST00000558040 NACAP1Q9BZK3 213 aa20.16■□□□□ 0.82
SNX1-203ENST00000558040 AATFQ9NY61 560 aaKnown RBP eCLIP20.16■□□□□ 0.82
SNX1-203ENST00000558040 CTNNA3Q9UI47 895 aa20.16■□□□□ 0.82
SNX1-203ENST00000558040 HDAC9Q9UKV0 1011 aa20.16■□□□□ 0.82
SNX1-203ENST00000558040 GPR75-ASB3A0A0A6YYF3 556 aa20.15■□□□□ 0.82
SNX1-203ENST00000558040 PATL2C9JE40 543 aaKnown RBP20.15■□□□□ 0.82
SNX1-203ENST00000558040 APPP05067 770 aa20.15■□□□□ 0.82
SNX1-203ENST00000558040 BTDP43251 543 aa20.15■□□□□ 0.82
SNX1-203ENST00000558040 PPP4CP60510 307 aa20.15■□□□□ 0.82
SNX1-203ENST00000558040 VPS53Q5VIR6 699 aa20.15■□□□□ 0.82
SNX1-203ENST00000558040 SERPINA10Q9UK55 444 aa20.15■□□□□ 0.82
SNX1-203ENST00000558040 SLC4A4Q9Y6R1 1079 aa20.15■□□□□ 0.82
SNX1-203ENST00000558040 DICER1Q9UPY3 1922 aaKnown RBP20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms