RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 B4GALNT3Q6L9W6 998 aa17.53■□□□□ 0.4
USP3-205ENST00000557884 ZGPATQ8N5A5 531 aaKnown RBP17.53■□□□□ 0.4
USP3-205ENST00000557884 ZC3H15Q8WU90 426 aaKnown RBP17.53■□□□□ 0.4
USP3-205ENST00000557884 ZNF512BQ96KM6 892 aaPredicted RBP17.53■□□□□ 0.4
USP3-205ENST00000557884 GLIS2Q9BZE0 524 aaPredicted RBP17.53■□□□□ 0.4
USP3-205ENST00000557884 SCAF8Q9UPN6 1271 aaKnown RBP17.53■□□□□ 0.4
USP3-205ENST00000557884 SUGT1Q9Y2Z0 365 aa17.53■□□□□ 0.4
USP3-205ENST00000557884 AOX1Q06278 1338 aa17.52■□□□□ 0.4
USP3-205ENST00000557884 SPDYE2BA6NHP3 402 aa17.52■□□□□ 0.4
USP3-205ENST00000557884 SPDYE6P0CI01 402 aa17.52■□□□□ 0.4
USP3-205ENST00000557884 DIXDC1Q155Q3 683 aa17.52■□□□□ 0.4
USP3-205ENST00000557884 TSHZ3Q63HK5 1081 aa17.52■□□□□ 0.4
USP3-205ENST00000557884 ZBED3Q96IU2 234 aaPredicted RBP17.52■□□□□ 0.4
USP3-205ENST00000557884 PRMT6Q96LA8 375 aaPredicted RBP17.52■□□□□ 0.4
USP3-205ENST00000557884 ZBTB47Q9UFB7 747 aaPredicted RBP17.52■□□□□ 0.4
USP3-205ENST00000557884 PGAP2Q9UHJ9 254 aa17.52■□□□□ 0.4
USP3-205ENST00000557884 SERPINA10Q9UK55 444 aa17.52■□□□□ 0.4
USP3-205ENST00000557884 MAST3O60307 1309 aa17.51■□□□□ 0.39
USP3-205ENST00000557884 ADAMTSL1Q8N6G6 1762 aa17.51■□□□□ 0.39
USP3-205ENST00000557884 CLRN2A0PK11 232 aa17.51■□□□□ 0.39
USP3-205ENST00000557884 TRAF5O00463 557 aa17.51■□□□□ 0.39
USP3-205ENST00000557884 CYP2E1P05181 493 aaPredicted RBP17.51■□□□□ 0.39
USP3-205ENST00000557884 FMR1Q06787 632 aaKnown RBP eCLIP17.51■□□□□ 0.39
USP3-205ENST00000557884 SPTY2D1Q68D10 685 aaPredicted RBP17.51■□□□□ 0.39
USP3-205ENST00000557884 DLK2Q6UY11 383 aa17.51■□□□□ 0.39
USP3-205ENST00000557884 ERICH6Q7L0X2 663 aa17.51■□□□□ 0.39
USP3-205ENST00000557884 USP48Q86UV5 1035 aa17.51■□□□□ 0.39
USP3-205ENST00000557884 DZIP1Q86YF9 867 aaKnown RBP17.51■□□□□ 0.39
USP3-205ENST00000557884 MTMR14Q8NCE2 650 aa17.51■□□□□ 0.39
USP3-205ENST00000557884 OTUD7AQ8TE49 926 aaPredicted RBP17.51■□□□□ 0.39
USP3-205ENST00000557884 TEKT1Q969V4 418 aa17.51■□□□□ 0.39
USP3-205ENST00000557884 DCPSQ96C86 337 aaKnown RBP17.51■□□□□ 0.39
USP3-205ENST00000557884 RAI14Q9P0K7 980 aa17.51■□□□□ 0.39
USP3-205ENST00000557884 ADM5C9JUS6 153 aa17.5■□□□□ 0.39
USP3-205ENST00000557884 NEFLP07196 543 aa17.5■□□□□ 0.39
USP3-205ENST00000557884 KRT26Q7Z3Y9 468 aa17.5■□□□□ 0.39
USP3-205ENST00000557884 SMC5Q8IY18 1101 aa17.5■□□□□ 0.39
USP3-205ENST00000557884 DNAJC2Q99543 621 aaKnown RBP17.5■□□□□ 0.39
USP3-205ENST00000557884 BOLA2Q9H3K6 86 aa17.5■□□□□ 0.39
USP3-205ENST00000557884 PIH1D3Q9NQM4 214 aaKnown RBP17.5■□□□□ 0.39
USP3-205ENST00000557884 LRP2BPQ9P2M1 347 aa17.5■□□□□ 0.39
USP3-205ENST00000557884 ITGBL1O95965 494 aaPredicted RBP17.49■□□□□ 0.39
USP3-205ENST00000557884 HDLBPQ00341 1268 aaKnown RBP17.49■□□□□ 0.39
USP3-205ENST00000557884 MECOMQ03112 1051 aa17.49■□□□□ 0.39
USP3-205ENST00000557884 LNPKQ9C0E8 428 aa17.49■□□□□ 0.39
USP3-205ENST00000557884 ANTXR1Q9H6X2 564 aa17.49■□□□□ 0.39
USP3-205ENST00000557884 VEZTQ9HBM0 779 aa17.49■□□□□ 0.39
USP3-205ENST00000557884 DAGLAQ9Y4D2 1042 aa17.49■□□□□ 0.39
USP3-205ENST00000557884 ATP5JP18859 108 aa17.48■□□□□ 0.39
USP3-205ENST00000557884 CDC37L1Q7L3B6 337 aa17.48■□□□□ 0.39
USP3-205ENST00000557884 SULF1Q8IWU6 871 aa17.48■□□□□ 0.39
USP3-205ENST00000557884 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.48■□□□□ 0.39
USP3-205ENST00000557884 EDC3Q96F86 508 aaKnown RBP17.48■□□□□ 0.39
USP3-205ENST00000557884 GPATCH3Q96I76 525 aa17.48■□□□□ 0.39
USP3-205ENST00000557884 ZDHHC15Q96MV8 337 aa17.48■□□□□ 0.39
USP3-205ENST00000557884 TDRD3Q9H7E2 651 aaKnown RBP17.48■□□□□ 0.39
USP3-205ENST00000557884 ECHDC1Q9NTX5 307 aa17.48■□□□□ 0.39
USP3-205ENST00000557884 GOLIM4O00461 696 aa17.47■□□□□ 0.39
USP3-205ENST00000557884 MYO1BO43795 1136 aa17.47■□□□□ 0.39
USP3-205ENST00000557884 IDH1O75874 414 aaKnown RBP17.47■□□□□ 0.39
USP3-205ENST00000557884 APOBEC3HQ6NTF7 200 aaKnown RBP17.47■□□□□ 0.39
USP3-205ENST00000557884 HHIPL2Q6UWX4 724 aa17.47■□□□□ 0.39
USP3-205ENST00000557884 ZNF384Q8TF68 577 aa17.47■□□□□ 0.39
USP3-205ENST00000557884 MRIQ9BWK5 157 aa17.47■□□□□ 0.39
USP3-205ENST00000557884 PASKQ96RG2 1323 aa17.47■□□□□ 0.39
USP3-205ENST00000557884 SPDYE2Q495Y8 402 aa17.46■□□□□ 0.39
USP3-205ENST00000557884 NSUN4Q96CB9 384 aaKnown RBP17.46■□□□□ 0.39
USP3-205ENST00000557884 HAUS7Q99871 368 aa17.46■□□□□ 0.39
USP3-205ENST00000557884 ZNF408Q9H9D4 720 aa17.46■□□□□ 0.39
USP3-205ENST00000557884 ZNF70Q9UC06 446 aaPredicted RBP17.46■□□□□ 0.39
USP3-205ENST00000557884 PITPNM2Q9BZ72 1349 aa17.46■□□□□ 0.38
USP3-205ENST00000557884 MYH13Q9UKX3 1938 aa17.45■□□□□ 0.38
USP3-205ENST00000557884 CACNB3P54284 484 aa17.45■□□□□ 0.38
USP3-205ENST00000557884 NUCB1Q02818 461 aa17.45■□□□□ 0.38
USP3-205ENST00000557884 PRAMEF18Q5VWM3 479 aa17.45■□□□□ 0.38
USP3-205ENST00000557884 NAA16Q6N069 864 aaPredicted RBP17.45■□□□□ 0.38
USP3-205ENST00000557884 CHD1LQ86WJ1 897 aa17.45■□□□□ 0.38
USP3-205ENST00000557884 APOBEC3FQ8IUX4 373 aaKnown RBP17.45■□□□□ 0.38
USP3-205ENST00000557884 MROH7-TTC4A0A0A0MT08 1334 aa17.45■□□□□ 0.38
USP3-205ENST00000557884 GAKO14976 1311 aa17.45■□□□□ 0.38
USP3-205ENST00000557884 TCP10L2B9ZVM9 353 aa17.44■□□□□ 0.38
USP3-205ENST00000557884 HSPA6P17066 643 aa17.44■□□□□ 0.38
USP3-205ENST00000557884 MX1P20591 662 aa17.44■□□□□ 0.38
USP3-205ENST00000557884 APLP1P51693 650 aa17.44■□□□□ 0.38
USP3-205ENST00000557884 GSTO1P78417 241 aa17.44■□□□□ 0.38
USP3-205ENST00000557884 HTRA3P83110 453 aa17.44■□□□□ 0.38
USP3-205ENST00000557884 SLF2Q8IX21 1173 aa17.44■□□□□ 0.38
USP3-205ENST00000557884 PAG1Q9NWQ8 432 aa17.44■□□□□ 0.38
USP3-205ENST00000557884 CELF2O95319 508 aaKnown RBP17.43■□□□□ 0.38
USP3-205ENST00000557884 MAP4K4O95819 1239 aaPredicted RBP17.43■□□□□ 0.38
USP3-205ENST00000557884 BTDP43251 543 aa17.43■□□□□ 0.38
USP3-205ENST00000557884 CDC42EP5Q6NZY7 148 aa17.43■□□□□ 0.38
USP3-205ENST00000557884 MAGEB6Q8N7X4 407 aa17.43■□□□□ 0.38
USP3-205ENST00000557884 CDCA5Q96FF9 252 aa17.43■□□□□ 0.38
USP3-205ENST00000557884 DEFB129Q9H1M3 183 aa17.43■□□□□ 0.38
USP3-205ENST00000557884 USP40Q9NVE5 1235 aa17.43■□□□□ 0.38
USP3-205ENST00000557884 SALL3Q9BXA9 1300 aa17.43■□□□□ 0.38
USP3-205ENST00000557884 LDHCP07864 332 aa17.42■□□□□ 0.38
USP3-205ENST00000557884 MAP3K12Q12852 859 aa17.42■□□□□ 0.38
USP3-205ENST00000557884 TTF1Q15361 905 aaPredicted RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms