RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 RHBDL3P58872 404 aa5.06□□□□□ -1.6
TDP1-217ENST00000557782 PPP2R3AQ06190 1150 aa5.06□□□□□ -1.6
TDP1-217ENST00000557782 POU4F2Q12837 409 aa5.06□□□□□ -1.6
TDP1-217ENST00000557782 HYAL2Q12891 473 aa5.06□□□□□ -1.6
TDP1-217ENST00000557782 BIRC2Q13490 618 aa5.06□□□□□ -1.6
TDP1-217ENST00000557782 BRDTQ58F21 947 aaPredicted RBP5.06□□□□□ -1.6
TDP1-217ENST00000557782 ZC3H12BQ5HYM0 836 aaKnown RBP5.06□□□□□ -1.6
TDP1-217ENST00000557782 WWC2Q6AWC2 1192 aa5.06□□□□□ -1.6
TDP1-217ENST00000557782 SPATC1Q76KD6 591 aa5.06□□□□□ -1.6
TDP1-217ENST00000557782 KRT25Q7Z3Z0 450 aa5.06□□□□□ -1.6
TDP1-217ENST00000557782 WDR75Q8IWA0 830 aaKnown RBP5.06□□□□□ -1.6
TDP1-217ENST00000557782 NIM1KQ8IY84 436 aa5.06□□□□□ -1.6
TDP1-217ENST00000557782 NINJ1Q92982 152 aa5.06□□□□□ -1.6
TDP1-217ENST00000557782 CNTNAP3BQ96NU0 1288 aa5.06□□□□□ -1.6
TDP1-217ENST00000557782 KLF16Q9BXK1 252 aaPredicted RBP5.06□□□□□ -1.6
TDP1-217ENST00000557782 CNTNAP3Q9BZ76 1288 aa5.06□□□□□ -1.6
TDP1-217ENST00000557782 CAAP1Q9H8G2 361 aa5.06□□□□□ -1.6
TDP1-217ENST00000557782 TIMMDC1Q9NPL8 285 aa5.06□□□□□ -1.6
TDP1-217ENST00000557782 KCNH4Q9UQ05 1017 aa5.06□□□□□ -1.6
TDP1-217ENST00000557782 THRAP3Q9Y2W1 955 aaKnown RBP5.06□□□□□ -1.6
TDP1-217ENST00000557782 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.06□□□□□ -1.6
TDP1-217ENST00000557782 A0A096LPE4 126 aa5.05□□□□□ -1.6
TDP1-217ENST00000557782 CCDC163A0A0D9SF12 145 aa5.05□□□□□ -1.6
TDP1-217ENST00000557782 A0A1W2PPZ6 126 aa5.05□□□□□ -1.6
TDP1-217ENST00000557782 FAM221AA4D161 298 aa5.05□□□□□ -1.6
TDP1-217ENST00000557782 SPINT1O43278 529 aa5.05□□□□□ -1.6
TDP1-217ENST00000557782 KCNQ2O43526 872 aa5.05□□□□□ -1.6
TDP1-217ENST00000557782 CILPO75339 1184 aa5.05□□□□□ -1.6
TDP1-217ENST00000557782 UPP2O95045 317 aa5.05□□□□□ -1.6
TDP1-217ENST00000557782 KIF4AO95239 1232 aa5.05□□□□□ -1.6
TDP1-217ENST00000557782 MYCLP1P12525 358 aaPredicted RBP5.05□□□□□ -1.6
TDP1-217ENST00000557782 MSX1P28360 303 aa5.05□□□□□ -1.6
TDP1-217ENST00000557782 SOX18P35713 384 aa5.05□□□□□ -1.6
TDP1-217ENST00000557782 GRIA4P48058 902 aa5.05□□□□□ -1.6
TDP1-217ENST00000557782 EPHB1P54762 984 aa5.05□□□□□ -1.6
TDP1-217ENST00000557782 CLCQ05315 142 aa5.05□□□□□ -1.6
TDP1-217ENST00000557782 OS9Q13438 667 aaPredicted RBP5.05□□□□□ -1.6
TDP1-217ENST00000557782 CCINQ13939 588 aa5.05□□□□□ -1.6
TDP1-217ENST00000557782 LRRC14Q15048 493 aa5.05□□□□□ -1.6
TDP1-217ENST00000557782 LONRF2Q1L5Z9 754 aa5.05□□□□□ -1.6
TDP1-217ENST00000557782 TM4SF20Q53R12 229 aa5.05□□□□□ -1.6
TDP1-217ENST00000557782 SAMD5Q5TGI4 173 aa5.05□□□□□ -1.6
TDP1-217ENST00000557782 POTEGQ6S5H5 508 aa5.05□□□□□ -1.6
TDP1-217ENST00000557782 C6orf15Q6UXA7 325 aaPredicted RBP5.05□□□□□ -1.6
TDP1-217ENST00000557782 EEPD1Q7L9B9 569 aa5.05□□□□□ -1.6
TDP1-217ENST00000557782 THNSL2Q86YJ6 484 aa5.05□□□□□ -1.6
TDP1-217ENST00000557782 JAMLQ86YT9 394 aa5.05□□□□□ -1.6
TDP1-217ENST00000557782 FAM178BQ8IXR5 827 aa5.05□□□□□ -1.6
TDP1-217ENST00000557782 PLD4Q96BZ4 506 aa5.05□□□□□ -1.6
TDP1-217ENST00000557782 PNMA5Q96PV4 448 aa5.05□□□□□ -1.6
TDP1-217ENST00000557782 SLC26A8Q96RN1 970 aa5.05□□□□□ -1.6
TDP1-217ENST00000557782 RPS6KC1Q96S38 1066 aa5.05□□□□□ -1.6
TDP1-217ENST00000557782 ZNF576Q9H609 170 aa5.05□□□□□ -1.6
TDP1-217ENST00000557782 PRDM16Q9HAZ2 1276 aa5.05□□□□□ -1.6
TDP1-217ENST00000557782 TMEM39AQ9NV64 488 aa5.05□□□□□ -1.6
TDP1-217ENST00000557782 CYP8B1Q9UNU6 501 aa5.05□□□□□ -1.6
TDP1-217ENST00000557782 PCDHB5Q9Y5E4 795 aa5.05□□□□□ -1.6
TDP1-217ENST00000557782 SLC12A7Q9Y666 1083 aa5.05□□□□□ -1.6
TDP1-217ENST00000557782 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.05□□□□□ -1.6
TDP1-217ENST00000557782 B2RBV5 119 aa5.04□□□□□ -1.6
TDP1-217ENST00000557782 CREB3O43889 395 aa5.04□□□□□ -1.6
TDP1-217ENST00000557782 PAGE1O75459 146 aa5.04□□□□□ -1.6
TDP1-217ENST00000557782 TARSP26639 723 aaKnown RBP5.04□□□□□ -1.6
TDP1-217ENST00000557782 KCNQ4P56696 695 aa5.04□□□□□ -1.6
TDP1-217ENST00000557782 NFKB2Q00653 900 aa5.04□□□□□ -1.6
TDP1-217ENST00000557782 SPRED3Q2MJR0 410 aa5.04□□□□□ -1.6
TDP1-217ENST00000557782 LRRFIP1Q32MZ4 808 aaKnown RBP5.04□□□□□ -1.6
TDP1-217ENST00000557782 PERM1Q5SV97 790 aa5.04□□□□□ -1.6
TDP1-217ENST00000557782 TMED8Q6PL24 325 aaPredicted RBP5.04□□□□□ -1.6
TDP1-217ENST00000557782 LYSMD3Q7Z3D4 306 aa5.04□□□□□ -1.6
TDP1-217ENST00000557782 PRICKLE2Q7Z3G6 844 aa5.04□□□□□ -1.6
TDP1-217ENST00000557782 NLRP8Q86W28 1048 aa5.04□□□□□ -1.6
TDP1-217ENST00000557782 DDX42Q86XP3 938 aaKnown RBP eCLIP5.04□□□□□ -1.6
TDP1-217ENST00000557782 TICAM2Q86XR7 235 aa5.04□□□□□ -1.6
TDP1-217ENST00000557782 SNIP1Q8TAD8 396 aaKnown RBP5.04□□□□□ -1.6
TDP1-217ENST00000557782 BHLHE41Q9C0J9 482 aaPredicted RBP5.04□□□□□ -1.6
TDP1-217ENST00000557782 CRISPLD1Q9H336 500 aa5.04□□□□□ -1.6
TDP1-217ENST00000557782 EHMT1Q9H9B1 1298 aa5.04□□□□□ -1.6
TDP1-217ENST00000557782 IQCA1LA6NCM1 817 aa5.03□□□□□ -1.6
TDP1-217ENST00000557782 HMGB1P1B2RPK0 211 aaPredicted RBP5.03□□□□□ -1.6
TDP1-217ENST00000557782 IRS4O14654 1257 aaPredicted RBP5.03□□□□□ -1.6
TDP1-217ENST00000557782 CAND2O75155 1236 aa5.03□□□□□ -1.6
TDP1-217ENST00000557782 ALDH1L1O75891 902 aa5.03□□□□□ -1.6
TDP1-217ENST00000557782 ACPPP15309 386 aa5.03□□□□□ -1.6
TDP1-217ENST00000557782 CPEP16870 476 aa5.03□□□□□ -1.6
TDP1-217ENST00000557782 NME2P22392 152 aa5.03□□□□□ -1.6
TDP1-217ENST00000557782 SLC19A1P41440 591 aa5.03□□□□□ -1.6
TDP1-217ENST00000557782 CTSOP43234 321 aaPredicted RBP5.03□□□□□ -1.6
TDP1-217ENST00000557782 PLAURQ03405 335 aa5.03□□□□□ -1.6
TDP1-217ENST00000557782 FAM50AQ14320 339 aaKnown RBP5.03□□□□□ -1.6
TDP1-217ENST00000557782 PPP2R5AQ15172 486 aa5.03□□□□□ -1.6
TDP1-217ENST00000557782 TTF1Q15361 905 aaPredicted RBP5.03□□□□□ -1.6
TDP1-217ENST00000557782 C21orf62-AS1Q17RA5 79 aa5.03□□□□□ -1.6
TDP1-217ENST00000557782 HGSNATQ68CP4 663 aa5.03□□□□□ -1.6
TDP1-217ENST00000557782 LRRC47Q8N1G4 583 aaKnown RBP5.03□□□□□ -1.6
TDP1-217ENST00000557782 TMEM102Q8N9M5 508 aaPredicted RBP5.03□□□□□ -1.6
TDP1-217ENST00000557782 ASAP3Q8TDY4 903 aa5.03□□□□□ -1.6
TDP1-217ENST00000557782 TM9SF2Q99805 663 aa5.03□□□□□ -1.6
TDP1-217ENST00000557782 SPATA9Q9BWV2 254 aa5.03□□□□□ -1.6
TDP1-217ENST00000557782 EFCC1Q9HA90 598 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms