RNA–Protein interactions for RNA: ENST00000557685.5

EFCAB11-213, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-213ENST00000557685 ACBD3Q9H3P7 528 aa6.94□□□□□ -1.3
EFCAB11-213ENST00000557685 GPN3Q9UHW5 284 aaPredicted RBP6.94□□□□□ -1.3
EFCAB11-213ENST00000557685 SAMM50Q9Y512 469 aa6.94□□□□□ -1.3
EFCAB11-213ENST00000557685 PPME1Q9Y570 386 aa6.94□□□□□ -1.3
EFCAB11-213ENST00000557685 PCDHGB7Q9Y5F8 929 aa6.94□□□□□ -1.3
EFCAB11-213ENST00000557685 H3BRJ5 948 aa6.93□□□□□ -1.3
EFCAB11-213ENST00000557685 SOX1O00570 391 aaPredicted RBP6.93□□□□□ -1.3
EFCAB11-213ENST00000557685 CELA3AP09093 270 aa6.93□□□□□ -1.3
EFCAB11-213ENST00000557685 EPHA1P21709 976 aa6.93□□□□□ -1.3
EFCAB11-213ENST00000557685 COL8A1P27658 744 aa6.93□□□□□ -1.3
EFCAB11-213ENST00000557685 GBP2P32456 591 aaPredicted RBP6.93□□□□□ -1.3
EFCAB11-213ENST00000557685 ZNF157P51786 506 aaPredicted RBP6.93□□□□□ -1.3
EFCAB11-213ENST00000557685 RPS26P62854 115 aaKnown RBP6.93□□□□□ -1.3
EFCAB11-213ENST00000557685 GNL2Q13823 731 aaKnown RBP6.93□□□□□ -1.3
EFCAB11-213ENST00000557685 LIG3P49916 1009 aa6.92□□□□□ -1.3
EFCAB11-213ENST00000557685 MAP3K11Q16584 847 aa6.92□□□□□ -1.3
EFCAB11-213ENST00000557685 TTBK2Q6IQ55 1244 aa6.92□□□□□ -1.3
EFCAB11-213ENST00000557685 FAM117BQ6P1L5 589 aa6.92□□□□□ -1.3
EFCAB11-213ENST00000557685 AGMOQ6ZNB7 445 aa6.92□□□□□ -1.3
EFCAB11-213ENST00000557685 PHC3Q8NDX5 983 aa6.92□□□□□ -1.3
EFCAB11-213ENST00000557685 WNT8BQ93098 351 aa6.92□□□□□ -1.3
EFCAB11-213ENST00000557685 SOX17Q9H6I2 414 aaPredicted RBP6.92□□□□□ -1.3
EFCAB11-213ENST00000557685 CAPN10Q9HC96 672 aa6.92□□□□□ -1.3
EFCAB11-213ENST00000557685 MINDY4BA8MYZ0 360 aa6.91□□□□□ -1.3
EFCAB11-213ENST00000557685 PIK3R2O00459 728 aa6.91□□□□□ -1.3
EFCAB11-213ENST00000557685 PAGE1O75459 146 aa6.91□□□□□ -1.3
EFCAB11-213ENST00000557685 BMP6P22004 513 aa6.91□□□□□ -1.3
EFCAB11-213ENST00000557685 NME2P22392 152 aa6.91□□□□□ -1.3
EFCAB11-213ENST00000557685 EIF4A3P38919 411 aaKnown RBP6.91□□□□□ -1.3
EFCAB11-213ENST00000557685 ARL4DP49703 201 aa6.91□□□□□ -1.3
EFCAB11-213ENST00000557685 PIP4K2BP78356 416 aa6.91□□□□□ -1.3
EFCAB11-213ENST00000557685 PCNX4Q63HM2 1172 aa6.91□□□□□ -1.3
EFCAB11-213ENST00000557685 MSL1Q68DK7 614 aa6.91□□□□□ -1.3
EFCAB11-213ENST00000557685 C8orf86Q6ZUL3 223 aa6.91□□□□□ -1.3
EFCAB11-213ENST00000557685 ILDR2Q71H61 639 aa6.91□□□□□ -1.3
EFCAB11-213ENST00000557685 WFDC8Q8IUA0 241 aa6.91□□□□□ -1.3
EFCAB11-213ENST00000557685 TINF2Q9BSI4 451 aa6.91□□□□□ -1.3
EFCAB11-213ENST00000557685 EMILIN2Q9BXX0 1053 aa6.91□□□□□ -1.3
EFCAB11-213ENST00000557685 OSGEPQ9NPF4 335 aa6.91□□□□□ -1.3
EFCAB11-213ENST00000557685 CYP8B1Q9UNU6 501 aa6.91□□□□□ -1.3
EFCAB11-213ENST00000557685 INPP5FQ9Y2H2 1132 aa6.91□□□□□ -1.3
EFCAB11-213ENST00000557685 LINC01387J3KSC0 135 aa6.9□□□□□ -1.3
EFCAB11-213ENST00000557685 ARNTP27540 789 aa6.9□□□□□ -1.3
EFCAB11-213ENST00000557685 TNNI2P48788 182 aa6.9□□□□□ -1.3
EFCAB11-213ENST00000557685 LMNB2Q03252 620 aa6.9□□□□□ -1.3
EFCAB11-213ENST00000557685 C19orf57Q0VDD7 668 aa6.9□□□□□ -1.3
EFCAB11-213ENST00000557685 LRRC14Q15048 493 aa6.9□□□□□ -1.3
EFCAB11-213ENST00000557685 Q8N3U1 123 aa6.9□□□□□ -1.3
EFCAB11-213ENST00000557685 SREK1Q8WXA9 508 aaKnown RBP6.9□□□□□ -1.3
EFCAB11-213ENST00000557685 RHOVQ96L33 236 aa6.9□□□□□ -1.3
EFCAB11-213ENST00000557685 SPON2Q9BUD6 331 aa6.9□□□□□ -1.3
EFCAB11-213ENST00000557685 KCNQ5Q9NR82 932 aa6.9□□□□□ -1.3
EFCAB11-213ENST00000557685 ADAMTS1Q9UHI8 967 aa6.9□□□□□ -1.3
EFCAB11-213ENST00000557685 TLR6Q9Y2C9 796 aa6.9□□□□□ -1.3
EFCAB11-213ENST00000557685 FSCN2O14926 492 aa6.89□□□□□ -1.31
EFCAB11-213ENST00000557685 PF4P02776 101 aa6.89□□□□□ -1.31
EFCAB11-213ENST00000557685 CDC25BP30305 580 aa6.89□□□□□ -1.31
EFCAB11-213ENST00000557685 AP3B2Q13367 1082 aa6.89□□□□□ -1.31
EFCAB11-213ENST00000557685 CAMK2GQ13555 558 aaPredicted RBP6.89□□□□□ -1.31
EFCAB11-213ENST00000557685 COL9A3Q14050 684 aaPredicted RBP6.89□□□□□ -1.31
EFCAB11-213ENST00000557685 SCARA3Q6AZY7 606 aa6.89□□□□□ -1.31
EFCAB11-213ENST00000557685 LINC00114Q6XXX2 140 aa6.89□□□□□ -1.31
EFCAB11-213ENST00000557685 CCDC84Q86UT8 332 aaPredicted RBP6.89□□□□□ -1.31
EFCAB11-213ENST00000557685 VPS37DQ86XT2 251 aa6.89□□□□□ -1.31
EFCAB11-213ENST00000557685 KIAA0825Q8IV33 1275 aa6.89□□□□□ -1.31
EFCAB11-213ENST00000557685 MAP4K3Q8IVH8 894 aa6.89□□□□□ -1.31
EFCAB11-213ENST00000557685 ZNF296Q8WUU4 475 aaPredicted RBP6.89□□□□□ -1.31
EFCAB11-213ENST00000557685 DRC1Q96MC2 740 aa6.89□□□□□ -1.31
EFCAB11-213ENST00000557685 GMLQ99445 158 aa6.89□□□□□ -1.31
EFCAB11-213ENST00000557685 F6X3S4 739 aa6.88□□□□□ -1.31
EFCAB11-213ENST00000557685 GNB5O14775 395 aa6.88□□□□□ -1.31
EFCAB11-213ENST00000557685 GREM1O60565 184 aa6.88□□□□□ -1.31
EFCAB11-213ENST00000557685 CYP11A1P05108 521 aa6.88□□□□□ -1.31
EFCAB11-213ENST00000557685 NID1P14543 1247 aa6.88□□□□□ -1.31
EFCAB11-213ENST00000557685 TFE3P19532 575 aaPredicted RBP6.88□□□□□ -1.31
EFCAB11-213ENST00000557685 LMNB1P20700 586 aa6.88□□□□□ -1.31
EFCAB11-213ENST00000557685 GJA8P48165 433 aa6.88□□□□□ -1.31
EFCAB11-213ENST00000557685 GSTM4Q03013 218 aa6.88□□□□□ -1.31
EFCAB11-213ENST00000557685 PAK2Q13177 524 aa6.88□□□□□ -1.31
EFCAB11-213ENST00000557685 SF3A1Q15459 793 aaKnown RBP6.88□□□□□ -1.31
EFCAB11-213ENST00000557685 FBXL19Q6PCT2 694 aa6.88□□□□□ -1.31
EFCAB11-213ENST00000557685 SULF2Q8IWU5 870 aa6.88□□□□□ -1.31
EFCAB11-213ENST00000557685 TRIM42Q8IWZ5 723 aa6.88□□□□□ -1.31
EFCAB11-213ENST00000557685 DMRTC2Q8IXT2 367 aaPredicted RBP6.88□□□□□ -1.31
EFCAB11-213ENST00000557685 KLHL23Q8NBE8 558 aa6.88□□□□□ -1.31
EFCAB11-213ENST00000557685 SLC7A3Q8WY07 619 aa6.88□□□□□ -1.31
EFCAB11-213ENST00000557685 SPATA32Q96LK8 384 aa6.88□□□□□ -1.31
EFCAB11-213ENST00000557685 NT5C1AQ9BXI3 368 aa6.88□□□□□ -1.31
EFCAB11-213ENST00000557685 SUPT16HQ9Y5B9 1047 aaKnown RBP6.88□□□□□ -1.31
EFCAB11-213ENST00000557685 ROBO2Q9HCK4 1378 aa6.87□□□□□ -1.31
EFCAB11-213ENST00000557685 C1QTNF9BB2RNN3 333 aa6.87□□□□□ -1.31
EFCAB11-213ENST00000557685 IGSF3O75054 1194 aa6.87□□□□□ -1.31
EFCAB11-213ENST00000557685 GARTP22102 1010 aa6.87□□□□□ -1.31
EFCAB11-213ENST00000557685 DGKGP49619 791 aa6.87□□□□□ -1.31
EFCAB11-213ENST00000557685 SETDB1Q15047 1291 aa6.87□□□□□ -1.31
EFCAB11-213ENST00000557685 HGSNATQ68CP4 663 aa6.87□□□□□ -1.31
EFCAB11-213ENST00000557685 TXNDC11Q6PKC3 985 aa6.87□□□□□ -1.31
EFCAB11-213ENST00000557685 RASGRP4Q8TDF6 673 aa6.87□□□□□ -1.31
EFCAB11-213ENST00000557685 STK35Q8TDR2 534 aa6.87□□□□□ -1.31
EFCAB11-213ENST00000557685 USP35Q9P2H5 1018 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms