RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 MFSD14BQ5SR56 506 aa20.82■□□□□ 0.92
NEK9-211ENST00000557673 JAG2Q9Y219 1238 aa20.82■□□□□ 0.92
NEK9-211ENST00000557673 ECM29Q5VYK3 1845 aa20.81■□□□□ 0.92
NEK9-211ENST00000557673 SPDYE2Q495Y8 402 aa20.81■□□□□ 0.92
NEK9-211ENST00000557673 TDRD7Q8NHU6 1098 aaKnown RBP20.81■□□□□ 0.92
NEK9-211ENST00000557673 ARHGAP45Q92619 1136 aa20.81■□□□□ 0.92
NEK9-211ENST00000557673 API5Q9BZZ5 524 aaKnown RBP20.81■□□□□ 0.92
NEK9-211ENST00000557673 RCAN3Q9UKA8 241 aa20.81■□□□□ 0.92
NEK9-211ENST00000557673 TTF2Q9UNY4 1162 aaKnown RBP20.81■□□□□ 0.92
NEK9-211ENST00000557673 TESPA1A2RU30 521 aaPredicted RBP20.8■□□□□ 0.92
NEK9-211ENST00000557673 TNNI2P48788 182 aa20.8■□□□□ 0.92
NEK9-211ENST00000557673 CRHR2Q13324 411 aa20.8■□□□□ 0.92
NEK9-211ENST00000557673 ARHGEF6Q15052 776 aa20.8■□□□□ 0.92
NEK9-211ENST00000557673 EFCC1Q9HA90 598 aa20.8■□□□□ 0.92
NEK9-211ENST00000557673 ZNF70Q9UC06 446 aaPredicted RBP20.8■□□□□ 0.92
NEK9-211ENST00000557673 TRIM27P14373 513 aa20.79■□□□□ 0.92
NEK9-211ENST00000557673 SP3Q02447 781 aa20.79■□□□□ 0.92
NEK9-211ENST00000557673 OPTNQ96CV9 577 aa20.79■□□□□ 0.92
NEK9-211ENST00000557673 BICC1Q9H694 974 aaKnown RBP20.79■□□□□ 0.92
NEK9-211ENST00000557673 PTPN22Q9Y2R2 807 aa20.79■□□□□ 0.92
NEK9-211ENST00000557673 ATF7IPQ6VMQ6 1270 aa20.78■□□□□ 0.92
NEK9-211ENST00000557673 VPS37DQ86XT2 251 aa20.78■□□□□ 0.92
NEK9-211ENST00000557673 DZIP1LQ8IYY4 767 aaKnown RBP20.78■□□□□ 0.92
NEK9-211ENST00000557673 CD99L2Q8TCZ2 262 aa20.78■□□□□ 0.92
NEK9-211ENST00000557673 FRAT1Q92837 279 aaPredicted RBP20.78■□□□□ 0.92
NEK9-211ENST00000557673 FAM84BQ96KN1 310 aaPredicted RBP20.78■□□□□ 0.92
NEK9-211ENST00000557673 TDRD3Q9H7E2 651 aaKnown RBP20.78■□□□□ 0.92
NEK9-211ENST00000557673 IPO8O15397 1037 aaKnown RBP20.77■□□□□ 0.92
NEK9-211ENST00000557673 WDHD1O75717 1129 aaPredicted RBP20.77■□□□□ 0.92
NEK9-211ENST00000557673 GJA5P36382 358 aa20.77■□□□□ 0.92
NEK9-211ENST00000557673 GYG1P46976 350 aa20.77■□□□□ 0.92
NEK9-211ENST00000557673 ANKRD44Q8N8A2 993 aa20.77■□□□□ 0.92
NEK9-211ENST00000557673 USP44Q9H0E7 712 aa20.77■□□□□ 0.92
NEK9-211ENST00000557673 ELP3Q9H9T3 547 aa20.77■□□□□ 0.92
NEK9-211ENST00000557673 AOX1Q06278 1338 aa20.77■□□□□ 0.91
NEK9-211ENST00000557673 MROH5Q6ZUA9 1318 aa20.77■□□□□ 0.91
NEK9-211ENST00000557673 GTF2A2P52657 109 aa20.76■□□□□ 0.91
NEK9-211ENST00000557673 RABL6Q3YEC7 729 aaPredicted RBP20.76■□□□□ 0.91
NEK9-211ENST00000557673 ZKSCAN2Q63HK3 967 aa20.76■□□□□ 0.91
NEK9-211ENST00000557673 TBC1D22AQ8WUA7 517 aa20.76■□□□□ 0.91
NEK9-211ENST00000557673 PTPN18Q99952 460 aa20.76■□□□□ 0.91
NEK9-211ENST00000557673 TNNQ9UQP3 1299 aa20.76■□□□□ 0.91
NEK9-211ENST00000557673 CSADQ9Y600 493 aa20.76■□□□□ 0.91
NEK9-211ENST00000557673 FRAT2O75474 233 aaPredicted RBP20.75■□□□□ 0.91
NEK9-211ENST00000557673 CRKP46108 304 aa20.75■□□□□ 0.91
NEK9-211ENST00000557673 MAP3K9P80192 1104 aa20.75■□□□□ 0.91
NEK9-211ENST00000557673 HDLBPQ00341 1268 aaKnown RBP20.75■□□□□ 0.91
NEK9-211ENST00000557673 CAVIN4Q5BKX8 364 aa20.75■□□□□ 0.91
NEK9-211ENST00000557673 ARMC5Q96C12 935 aa20.75■□□□□ 0.91
NEK9-211ENST00000557673 PUS3Q9BZE2 481 aaKnown RBP20.75■□□□□ 0.91
NEK9-211ENST00000557673 ZFYVE28Q9HCC9 887 aa20.75■□□□□ 0.91
NEK9-211ENST00000557673 LAMB1P07942 1786 aa20.74■□□□□ 0.91
NEK9-211ENST00000557673 TCP10L2B9ZVM9 353 aa20.74■□□□□ 0.91
NEK9-211ENST00000557673 HOOK2Q96ED9 719 aa20.74■□□□□ 0.91
NEK9-211ENST00000557673 MS4A4AQ96JQ5 239 aa20.74■□□□□ 0.91
NEK9-211ENST00000557673 TEPSINQ96N21 525 aa20.74■□□□□ 0.91
NEK9-211ENST00000557673 RIPOR2Q9Y4F9 1068 aa20.74■□□□□ 0.91
NEK9-211ENST00000557673 POTEFA5A3E0 1075 aa20.73■□□□□ 0.91
NEK9-211ENST00000557673 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.73■□□□□ 0.91
NEK9-211ENST00000557673 FBXO33Q7Z6M2 555 aa20.73■□□□□ 0.91
NEK9-211ENST00000557673 NBPF11Q86T75 865 aa20.73■□□□□ 0.91
NEK9-211ENST00000557673 TMEM106CQ9BVX2 250 aa20.73■□□□□ 0.91
NEK9-211ENST00000557673 TMEM39BQ9GZU3 492 aa20.73■□□□□ 0.91
NEK9-211ENST00000557673 CCL15-CCL14A0A0B4J2E2 113 aa20.72■□□□□ 0.91
NEK9-211ENST00000557673 VGLL4Q14135 290 aa20.72■□□□□ 0.91
NEK9-211ENST00000557673 TAF1CQ15572 869 aaPredicted RBP20.72■□□□□ 0.91
NEK9-211ENST00000557673 CCL15Q16663 113 aa20.72■□□□□ 0.91
NEK9-211ENST00000557673 TEKT1Q969V4 418 aa20.72■□□□□ 0.91
NEK9-211ENST00000557673 MRIQ9BWK5 157 aa20.72■□□□□ 0.91
NEK9-211ENST00000557673 TMOD2Q9NZR1 351 aa20.72■□□□□ 0.91
NEK9-211ENST00000557673 METTL24Q5JXM2 366 aa20.71■□□□□ 0.91
NEK9-211ENST00000557673 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.71■□□□□ 0.91
NEK9-211ENST00000557673 KLHDC4Q8TBB5 520 aa20.71■□□□□ 0.91
NEK9-211ENST00000557673 BRI3BPQ8WY22 251 aa20.71■□□□□ 0.91
NEK9-211ENST00000557673 CLUAP1Q96AJ1 413 aa20.71■□□□□ 0.91
NEK9-211ENST00000557673 HTTP42858 3142 aa20.71■□□□□ 0.91
NEK9-211ENST00000557673 CHAF1AQ13111 956 aaPredicted RBP20.7■□□□□ 0.9
NEK9-211ENST00000557673 OTUD5Q96G74 571 aa20.7■□□□□ 0.9
NEK9-211ENST00000557673 SUGT1Q9Y2Z0 365 aa20.7■□□□□ 0.9
NEK9-211ENST00000557673 PDE8BO95263 885 aa20.69■□□□□ 0.9
NEK9-211ENST00000557673 CETPP11597 493 aa20.69■□□□□ 0.9
NEK9-211ENST00000557673 SLC9C1Q4G0N8 1177 aa20.69■□□□□ 0.9
NEK9-211ENST00000557673 LRRC24Q50LG9 513 aa20.69■□□□□ 0.9
NEK9-211ENST00000557673 FKBP1CQ5VVH2 108 aa20.69■□□□□ 0.9
NEK9-211ENST00000557673 FTSJ3Q8IY81 847 aaKnown RBP20.69■□□□□ 0.9
NEK9-211ENST00000557673 ZDHHC15Q96MV8 337 aa20.69■□□□□ 0.9
NEK9-211ENST00000557673 ZCCHC17Q9NP64 241 aaKnown RBP20.69■□□□□ 0.9
NEK9-211ENST00000557673 MAST3O60307 1309 aa20.69■□□□□ 0.9
NEK9-211ENST00000557673 KIAA0100Q14667 2235 aaKnown RBP20.68■□□□□ 0.9
NEK9-211ENST00000557673 UBTFL1P0CB47 393 aaPredicted RBP20.68■□□□□ 0.9
NEK9-211ENST00000557673 RLBP1P12271 317 aa20.68■□□□□ 0.9
NEK9-211ENST00000557673 KIF22Q14807 665 aa20.68■□□□□ 0.9
NEK9-211ENST00000557673 FAM83AQ86UY5 434 aa20.68■□□□□ 0.9
NEK9-211ENST00000557673 ERO1BQ86YB8 467 aa20.68■□□□□ 0.9
NEK9-211ENST00000557673 CDAN1Q8IWY9 1227 aa20.68■□□□□ 0.9
NEK9-211ENST00000557673 CNKSR2Q8WXI2 1034 aa20.68■□□□□ 0.9
NEK9-211ENST00000557673 IQSEC3Q9UPP2 1182 aaPredicted RBP20.68■□□□□ 0.9
NEK9-211ENST00000557673 SPDYE5A6NIY4 337 aa20.67■□□□□ 0.9
NEK9-211ENST00000557673 EN2P19622 333 aaPredicted RBP20.67■□□□□ 0.9
NEK9-211ENST00000557673 SNAPC2Q13487 334 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms