RNA–Protein interactions for RNA: ENST00000557478.5

NEDD1-212, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 5

Gene NEDD1, Length 595 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-212ENST00000557478 HOOK2Q96ED9 719 aa21.71■■□□□ 1.07
NEDD1-212ENST00000557478 VEZTQ9HBM0 779 aa21.71■■□□□ 1.07
NEDD1-212ENST00000557478 JAG2Q9Y219 1238 aa21.71■■□□□ 1.07
NEDD1-212ENST00000557478 KIF23Q02241 960 aaPredicted RBP21.7■■□□□ 1.06
NEDD1-212ENST00000557478 MAP3K11Q16584 847 aa21.7■■□□□ 1.06
NEDD1-212ENST00000557478 RASAL3Q86YV0 1011 aa21.7■■□□□ 1.06
NEDD1-212ENST00000557478 TMOD2Q9NZR1 351 aa21.7■■□□□ 1.06
NEDD1-212ENST00000557478 DENND2AQ9ULE3 1009 aa21.7■■□□□ 1.06
NEDD1-212ENST00000557478 HHIPL2Q6UWX4 724 aa21.69■■□□□ 1.06
NEDD1-212ENST00000557478 ZDHHC15Q96MV8 337 aa21.69■■□□□ 1.06
NEDD1-212ENST00000557478 UBE2Q2LH0YL09 131 aa21.68■■□□□ 1.06
NEDD1-212ENST00000557478 IREB2P48200 963 aaKnown RBP21.68■■□□□ 1.06
NEDD1-212ENST00000557478 LDLRAD1Q5T700 205 aa21.68■■□□□ 1.06
NEDD1-212ENST00000557478 FKBP1CQ5VVH2 108 aa21.68■■□□□ 1.06
NEDD1-212ENST00000557478 PRAMEF18Q5VWM3 479 aa21.68■■□□□ 1.06
NEDD1-212ENST00000557478 CLUAP1Q96AJ1 413 aa21.68■■□□□ 1.06
NEDD1-212ENST00000557478 ZNF70Q9UC06 446 aaPredicted RBP21.68■■□□□ 1.06
NEDD1-212ENST00000557478 IQSEC3Q9UPP2 1182 aaPredicted RBP21.68■■□□□ 1.06
NEDD1-212ENST00000557478 PDS5AQ29RF7 1337 aaKnown RBP21.67■■□□□ 1.06
NEDD1-212ENST00000557478 SALL1Q9NSC2 1324 aa21.67■■□□□ 1.06
NEDD1-212ENST00000557478 CLRN2A0PK11 232 aa21.67■■□□□ 1.06
NEDD1-212ENST00000557478 INHBEP58166 350 aa21.67■■□□□ 1.06
NEDD1-212ENST00000557478 SREBF2Q12772 1141 aa21.67■■□□□ 1.06
NEDD1-212ENST00000557478 RASA3Q14644 834 aa21.67■■□□□ 1.06
NEDD1-212ENST00000557478 MVPQ14764 893 aaKnown RBP21.67■■□□□ 1.06
NEDD1-212ENST00000557478 G3BP1Q13283 466 aaKnown RBP eCLIP21.66■■□□□ 1.06
NEDD1-212ENST00000557478 SLF2Q8IX21 1173 aa21.66■■□□□ 1.06
NEDD1-212ENST00000557478 ANGEL1Q9UNK9 670 aaKnown RBP21.66■■□□□ 1.06
NEDD1-212ENST00000557478 SCAF8Q9UPN6 1271 aaKnown RBP21.66■■□□□ 1.06
NEDD1-212ENST00000557478 TMEM57Q8N5G2 664 aa21.65■■□□□ 1.06
NEDD1-212ENST00000557478 CSRNP1Q96S65 589 aa21.65■■□□□ 1.06
NEDD1-212ENST00000557478 TDRD3Q9H7E2 651 aaKnown RBP21.65■■□□□ 1.06
NEDD1-212ENST00000557478 PA2G4Q9UQ80 394 aaKnown RBP21.65■■□□□ 1.06
NEDD1-212ENST00000557478 LDHBP07195 334 aaKnown RBP21.64■■□□□ 1.05
NEDD1-212ENST00000557478 ZBTB48P10074 688 aaPredicted RBP21.64■■□□□ 1.05
NEDD1-212ENST00000557478 SPTY2D1Q68D10 685 aaPredicted RBP21.64■■□□□ 1.05
NEDD1-212ENST00000557478 FAM83AQ86UY5 434 aa21.64■■□□□ 1.05
NEDD1-212ENST00000557478 SLC10A4Q96EP9 437 aa21.64■■□□□ 1.05
NEDD1-212ENST00000557478 CHMP4BQ9H444 224 aaKnown RBP21.64■■□□□ 1.05
NEDD1-212ENST00000557478 ALDH1A1P00352 501 aa21.63■■□□□ 1.05
NEDD1-212ENST00000557478 TM4SF4P48230 202 aa21.63■■□□□ 1.05
NEDD1-212ENST00000557478 CCDC102BQ68D86 513 aa21.63■■□□□ 1.05
NEDD1-212ENST00000557478 ANKRD13AQ8IZ07 590 aa21.63■■□□□ 1.05
NEDD1-212ENST00000557478 MOB2Q70IA6 237 aa21.62■■□□□ 1.05
NEDD1-212ENST00000557478 ITPRIPQ8IWB1 547 aa21.62■■□□□ 1.05
NEDD1-212ENST00000557478 ZIC5Q96T25 663 aa21.62■■□□□ 1.05
NEDD1-212ENST00000557478 RNF186Q9NXI6 227 aa21.62■■□□□ 1.05
NEDD1-212ENST00000557478 PCDHAC2Q9Y5I4 1007 aa21.62■■□□□ 1.05
NEDD1-212ENST00000557478 ARAP2Q8WZ64 1704 aa21.62■■□□□ 1.05
NEDD1-212ENST00000557478 A0A1B0GUL7 405 aa21.61■■□□□ 1.05
NEDD1-212ENST00000557478 MANSC4A6NHS7 340 aaPredicted RBP21.61■■□□□ 1.05
NEDD1-212ENST00000557478 IGSF3O75054 1194 aa21.61■■□□□ 1.05
NEDD1-212ENST00000557478 NOM1Q5C9Z4 860 aaKnown RBP21.61■■□□□ 1.05
NEDD1-212ENST00000557478 GORABQ5T7V8 394 aa21.61■■□□□ 1.05
NEDD1-212ENST00000557478 GPR108Q9NPR9 543 aa21.61■■□□□ 1.05
NEDD1-212ENST00000557478 ECM29Q5VYK3 1845 aa21.6■■□□□ 1.05
NEDD1-212ENST00000557478 TRPA1O75762 1119 aa21.6■■□□□ 1.05
NEDD1-212ENST00000557478 ATP8B2P98198 1209 aa21.6■■□□□ 1.05
NEDD1-212ENST00000557478 TFCP2Q12800 502 aa21.6■■□□□ 1.05
NEDD1-212ENST00000557478 PRKG1Q13976 671 aa21.6■■□□□ 1.05
NEDD1-212ENST00000557478 NBPF12Q5TAG4 269 aaPredicted RBP21.6■■□□□ 1.05
NEDD1-212ENST00000557478 SPRYD7Q5W111 196 aa21.6■■□□□ 1.05
NEDD1-212ENST00000557478 APOBEC3HQ6NTF7 200 aaKnown RBP21.6■■□□□ 1.05
NEDD1-212ENST00000557478 TCP10L2B9ZVM9 353 aa21.59■■□□□ 1.05
NEDD1-212ENST00000557478 PHKA1P46020 1223 aa21.59■■□□□ 1.05
NEDD1-212ENST00000557478 DCAF15Q66K64 600 aa21.59■■□□□ 1.05
NEDD1-212ENST00000557478 OTUD7BQ6GQQ9 843 aa21.59■■□□□ 1.05
NEDD1-212ENST00000557478 SSH3Q8TE77 659 aa21.59■■□□□ 1.05
NEDD1-212ENST00000557478 XAGE2Q96GT9 111 aa21.59■■□□□ 1.05
NEDD1-212ENST00000557478 ZBTB7BO15156 539 aaPredicted RBP21.58■■□□□ 1.05
NEDD1-212ENST00000557478 TIMM10P62072 90 aa21.58■■□□□ 1.05
NEDD1-212ENST00000557478 POLA2Q14181 598 aa21.58■■□□□ 1.05
NEDD1-212ENST00000557478 NEUROD6Q96NK8 337 aa21.58■■□□□ 1.05
NEDD1-212ENST00000557478 CFHR5Q9BXR6 569 aa21.58■■□□□ 1.05
NEDD1-212ENST00000557478 RPAP1Q9BWH6 1393 aaPredicted RBP21.58■■□□□ 1.04
NEDD1-212ENST00000557478 PNMA6EA0A0J9YXQ4 647 aa21.57■■□□□ 1.04
NEDD1-212ENST00000557478 USP2O75604 605 aaPredicted RBP21.57■■□□□ 1.04
NEDD1-212ENST00000557478 MAP4K4O95819 1239 aaPredicted RBP21.57■■□□□ 1.04
NEDD1-212ENST00000557478 UQCRFS1P1P0C7P4 283 aa21.57■■□□□ 1.04
NEDD1-212ENST00000557478 OS9Q13438 667 aaPredicted RBP21.57■■□□□ 1.04
NEDD1-212ENST00000557478 GRIK5Q16478 980 aa21.57■■□□□ 1.04
NEDD1-212ENST00000557478 TEPSINQ96N21 525 aa21.57■■□□□ 1.04
NEDD1-212ENST00000557478 TSKSQ9UJT2 592 aa21.57■■□□□ 1.04
NEDD1-212ENST00000557478 CSADQ9Y600 493 aa21.57■■□□□ 1.04
NEDD1-212ENST00000557478 RASGRF1Q13972 1273 aa21.56■■□□□ 1.04
NEDD1-212ENST00000557478 DZIP1Q86YF9 867 aaKnown RBP21.56■■□□□ 1.04
NEDD1-212ENST00000557478 FAM151AQ8WW52 585 aa21.56■■□□□ 1.04
NEDD1-212ENST00000557478 FAM163AQ96GL9 167 aaPredicted RBP21.56■■□□□ 1.04
NEDD1-212ENST00000557478 PRDX5P30044 214 aa21.55■■□□□ 1.04
NEDD1-212ENST00000557478 GSTO1P78417 241 aa21.55■■□□□ 1.04
NEDD1-212ENST00000557478 MAP3K9P80192 1104 aa21.55■■□□□ 1.04
NEDD1-212ENST00000557478 HSP90AB4PQ58FF6 505 aa21.55■■□□□ 1.04
NEDD1-212ENST00000557478 WNK4Q96J92 1243 aa21.55■■□□□ 1.04
NEDD1-212ENST00000557478 TMEM39BQ9GZU3 492 aa21.55■■□□□ 1.04
NEDD1-212ENST00000557478 TNNQ9UQP3 1299 aa21.55■■□□□ 1.04
NEDD1-212ENST00000557478 NOP58Q9Y2X3 529 aaKnown RBP21.55■■□□□ 1.04
NEDD1-212ENST00000557478 DAGLAQ9Y4D2 1042 aa21.55■■□□□ 1.04
NEDD1-212ENST00000557478 SSC5DA1L4H1 1573 aa21.54■■□□□ 1.04
NEDD1-212ENST00000557478 ADORA1P30542 326 aa21.54■■□□□ 1.04
NEDD1-212ENST00000557478 CCDC158Q5M9N0 1113 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms