RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 OPTNQ96CV9 577 aa17.82■□□□□ 0.44
SLIRP-210ENST00000557431 BICC1Q9H694 974 aaKnown RBP17.82■□□□□ 0.44
SLIRP-210ENST00000557431 CENPFP49454 3210 aa17.82■□□□□ 0.44
SLIRP-210ENST00000557431 HTTP42858 3142 aa17.82■□□□□ 0.44
SLIRP-210ENST00000557431 ALDH1L1O75891 902 aa17.81■□□□□ 0.44
SLIRP-210ENST00000557431 CRKP46108 304 aa17.81■□□□□ 0.44
SLIRP-210ENST00000557431 UBE4AQ14139 1066 aa17.81■□□□□ 0.44
SLIRP-210ENST00000557431 DZIP1LQ8IYY4 767 aaKnown RBP17.81■□□□□ 0.44
SLIRP-210ENST00000557431 ANKRD13AQ8IZ07 590 aa17.81■□□□□ 0.44
SLIRP-210ENST00000557431 TEPSINQ96N21 525 aa17.81■□□□□ 0.44
SLIRP-210ENST00000557431 ANP32CO43423 234 aa17.8■□□□□ 0.44
SLIRP-210ENST00000557431 INHBEP58166 350 aa17.8■□□□□ 0.44
SLIRP-210ENST00000557431 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.8■□□□□ 0.44
SLIRP-210ENST00000557431 RIPOR2Q9Y4F9 1068 aa17.8■□□□□ 0.44
SLIRP-210ENST00000557431 MYH2Q9UKX2 1941 aa17.8■□□□□ 0.44
SLIRP-210ENST00000557431 ECM2O94769 699 aaPredicted RBP17.79■□□□□ 0.44
SLIRP-210ENST00000557431 MGAMO43451 1857 aa17.79■□□□□ 0.44
SLIRP-210ENST00000557431 VGLL4Q14135 290 aa17.78■□□□□ 0.44
SLIRP-210ENST00000557431 ANKRD44Q8N8A2 993 aa17.78■□□□□ 0.44
SLIRP-210ENST00000557431 BRI3BPQ8WY22 251 aa17.78■□□□□ 0.44
SLIRP-210ENST00000557431 ERO1AQ96HE7 468 aa17.78■□□□□ 0.44
SLIRP-210ENST00000557431 MS4A4AQ96JQ5 239 aa17.78■□□□□ 0.44
SLIRP-210ENST00000557431 SERPINA10Q9UK55 444 aa17.78■□□□□ 0.44
SLIRP-210ENST00000557431 PTPN22Q9Y2R2 807 aa17.78■□□□□ 0.44
SLIRP-210ENST00000557431 DOCK2Q92608 1830 aa17.77■□□□□ 0.44
SLIRP-210ENST00000557431 MKI67P46013 3256 aaKnown RBP17.77■□□□□ 0.44
SLIRP-210ENST00000557431 BRCA2P51587 3418 aa17.77■□□□□ 0.44
SLIRP-210ENST00000557431 TNFAIP1Q13829 316 aa17.77■□□□□ 0.44
SLIRP-210ENST00000557431 METTL24Q5JXM2 366 aa17.77■□□□□ 0.44
SLIRP-210ENST00000557431 OTUD5Q96G74 571 aa17.77■□□□□ 0.44
SLIRP-210ENST00000557431 EFCC1Q9HA90 598 aa17.77■□□□□ 0.44
SLIRP-210ENST00000557431 CCL15-CCL14A0A0B4J2E2 113 aa17.76■□□□□ 0.43
SLIRP-210ENST00000557431 TESPA1A2RU30 521 aaPredicted RBP17.76■□□□□ 0.43
SLIRP-210ENST00000557431 BCAMP50895 628 aa17.76■□□□□ 0.43
SLIRP-210ENST00000557431 SP3Q02447 781 aa17.76■□□□□ 0.43
SLIRP-210ENST00000557431 TAF1CQ15572 869 aaPredicted RBP17.76■□□□□ 0.43
SLIRP-210ENST00000557431 CCL15Q16663 113 aa17.76■□□□□ 0.43
SLIRP-210ENST00000557431 FBXO33Q7Z6M2 555 aa17.76■□□□□ 0.43
SLIRP-210ENST00000557431 VPS37DQ86XT2 251 aa17.76■□□□□ 0.43
SLIRP-210ENST00000557431 FAM43AQ8N2R8 423 aa17.76■□□□□ 0.43
SLIRP-210ENST00000557431 MRPL50Q8N5N7 158 aaKnown RBP17.76■□□□□ 0.43
SLIRP-210ENST00000557431 MROH5Q6ZUA9 1318 aa17.75■□□□□ 0.43
SLIRP-210ENST00000557431 PTPRFP10586 1907 aa17.75■□□□□ 0.43
SLIRP-210ENST00000557431 FRAT2O75474 233 aaPredicted RBP17.75■□□□□ 0.43
SLIRP-210ENST00000557431 MYCP01106 439 aaPredicted RBP17.75■□□□□ 0.43
SLIRP-210ENST00000557431 EN2P19622 333 aaPredicted RBP17.75■□□□□ 0.43
SLIRP-210ENST00000557431 MAP3K9P80192 1104 aa17.75■□□□□ 0.43
SLIRP-210ENST00000557431 OTUD7BQ6GQQ9 843 aa17.75■□□□□ 0.43
SLIRP-210ENST00000557431 VGLL2Q8N8G2 317 aa17.75■□□□□ 0.43
SLIRP-210ENST00000557431 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.75■□□□□ 0.431e-8■■■■■ 34
SLIRP-210ENST00000557431 UTYO14607 1347 aa17.74■□□□□ 0.43
SLIRP-210ENST00000557431 UNCXA6NJT0 531 aa17.74■□□□□ 0.43
SLIRP-210ENST00000557431 RABL6Q3YEC7 729 aaPredicted RBP17.74■□□□□ 0.43
SLIRP-210ENST00000557431 PTCH2Q9Y6C5 1203 aa17.74■□□□□ 0.43
SLIRP-210ENST00000557431 TNNI2P48788 182 aa17.73■□□□□ 0.43
SLIRP-210ENST00000557431 ZKSCAN4Q969J2 545 aaPredicted RBP17.73■□□□□ 0.43
SLIRP-210ENST00000557431 ARHGAP39Q9C0H5 1083 aa17.73■□□□□ 0.43
SLIRP-210ENST00000557431 CSADQ9Y600 493 aa17.73■□□□□ 0.43
SLIRP-210ENST00000557431 SNCAIPQ9Y6H5 919 aa17.73■□□□□ 0.43
SLIRP-210ENST00000557431 TEKT1Q969V4 418 aa17.72■□□□□ 0.43
SLIRP-210ENST00000557431 WRNIP1Q96S55 665 aa17.72■□□□□ 0.43
SLIRP-210ENST00000557431 DOCK3Q8IZD9 2030 aa17.72■□□□□ 0.43
SLIRP-210ENST00000557431 ZNF521Q96K83 1311 aa17.72■□□□□ 0.43
SLIRP-210ENST00000557431 PDE8BO95263 885 aa17.71■□□□□ 0.43
SLIRP-210ENST00000557431 ZEB1P37275 1124 aaPredicted RBP17.71■□□□□ 0.43
SLIRP-210ENST00000557431 CAVIN4Q5BKX8 364 aa17.71■□□□□ 0.43
SLIRP-210ENST00000557431 ARMC5Q96C12 935 aa17.71■□□□□ 0.43
SLIRP-210ENST00000557431 ZFYVE28Q9HCC9 887 aa17.71■□□□□ 0.43
SLIRP-210ENST00000557431 PHIPQ8WWQ0 1821 aa17.7■□□□□ 0.42
SLIRP-210ENST00000557431 ZNF316A6NFI3 1004 aaPredicted RBP17.7■□□□□ 0.42
SLIRP-210ENST00000557431 SPDYE5A6NIY4 337 aa17.7■□□□□ 0.42
SLIRP-210ENST00000557431 GTF2A2P52657 109 aa17.7■□□□□ 0.42
SLIRP-210ENST00000557431 INTS3Q68E01 1043 aaKnown RBP17.7■□□□□ 0.42
SLIRP-210ENST00000557431 APOBEC3HQ6NTF7 200 aaKnown RBP17.7■□□□□ 0.42
SLIRP-210ENST00000557431 MIGA2Q7L4E1 593 aa17.7■□□□□ 0.42
SLIRP-210ENST00000557431 SSH1Q8WYL5 1049 aa17.7■□□□□ 0.42
SLIRP-210ENST00000557431 PCDH10Q9P2E7 1040 aa17.7■□□□□ 0.42
SLIRP-210ENST00000557431 BTBD19C9JJ37 291 aa17.69■□□□□ 0.42
SLIRP-210ENST00000557431 IRF6O14896 467 aa17.69■□□□□ 0.42
SLIRP-210ENST00000557431 FGFR2P21802 821 aa17.69■□□□□ 0.42
SLIRP-210ENST00000557431 INPP5BP32019 993 aa17.69■□□□□ 0.42
SLIRP-210ENST00000557431 TBC1D22AQ8WUA7 517 aa17.69■□□□□ 0.42
SLIRP-210ENST00000557431 USP44Q9H0E7 712 aa17.69■□□□□ 0.42
SLIRP-210ENST00000557431 ATAD5Q96QE3 1844 aa17.68■□□□□ 0.42
SLIRP-210ENST00000557431 RFX5P48382 616 aaPredicted RBP17.68■□□□□ 0.42
SLIRP-210ENST00000557431 HDLBPQ00341 1268 aaKnown RBP17.68■□□□□ 0.42
SLIRP-210ENST00000557431 DIXDC1Q155Q3 683 aa17.68■□□□□ 0.42
SLIRP-210ENST00000557431 SH3TC2Q8TF17 1288 aa17.68■□□□□ 0.42
SLIRP-210ENST00000557431 ZNF333Q96JL9 665 aa17.68■□□□□ 0.42
SLIRP-210ENST00000557431 ZDHHC15Q96MV8 337 aa17.68■□□□□ 0.42
SLIRP-210ENST00000557431 TMOD2Q9NZR1 351 aa17.68■□□□□ 0.42
SLIRP-210ENST00000557431 DOCK1Q14185 1865 aa17.67■□□□□ 0.42
SLIRP-210ENST00000557431 TCP10Q12799 353 aa17.67■□□□□ 0.42
SLIRP-210ENST00000557431 PUM3Q15397 648 aaKnown RBP17.67■□□□□ 0.42
SLIRP-210ENST00000557431 SLC9C1Q4G0N8 1177 aa17.67■□□□□ 0.42
SLIRP-210ENST00000557431 ERO1BQ86YB8 467 aa17.67■□□□□ 0.42
SLIRP-210ENST00000557431 SIL1Q9H173 461 aa17.67■□□□□ 0.42
SLIRP-210ENST00000557431 IFIT1P09914 478 aaKnown RBP17.66■□□□□ 0.42
SLIRP-210ENST00000557431 CTGFP29279 349 aa17.66■□□□□ 0.42
SLIRP-210ENST00000557431 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms