RNA–Protein interactions for RNA: ENST00000557422.1

RTN1-208, Transcript of reticulon 1, humanhuman

TSL 3

Gene RTN1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-208ENST00000557422 TCP10L2B9ZVM9 353 aa15.53■□□□□ 0.08
RTN1-208ENST00000557422 PLIN1O60240 522 aa15.53■□□□□ 0.08
RTN1-208ENST00000557422 LACTBP83111 547 aaPredicted RBP15.53■□□□□ 0.08
RTN1-208ENST00000557422 FLIIQ13045 1269 aa15.53■□□□□ 0.08
RTN1-208ENST00000557422 MFSD14BQ5SR56 506 aa15.53■□□□□ 0.08
RTN1-208ENST00000557422 TDRD7Q8NHU6 1098 aaKnown RBP15.53■□□□□ 0.08
RTN1-208ENST00000557422 TTF2Q9UNY4 1162 aaKnown RBP15.53■□□□□ 0.08
RTN1-208ENST00000557422 CSADQ9Y600 493 aa15.53■□□□□ 0.08
RTN1-208ENST00000557422 TLR2O60603 784 aa15.52■□□□□ 0.08
RTN1-208ENST00000557422 WDHD1O75717 1129 aaPredicted RBP15.52■□□□□ 0.08
RTN1-208ENST00000557422 FKBP5Q13451 457 aaPredicted RBP15.52■□□□□ 0.08
RTN1-208ENST00000557422 KIF22Q14807 665 aa15.52■□□□□ 0.08
RTN1-208ENST00000557422 CHRDL2Q6WN34 429 aa15.52■□□□□ 0.08
RTN1-208ENST00000557422 ZNF594Q96JF6 807 aaPredicted RBP15.52■□□□□ 0.08
RTN1-208ENST00000557422 CHMP3Q9Y3E7 222 aa15.52■□□□□ 0.08
RTN1-208ENST00000557422 SZT2Q5T011 3432 aa15.52■□□□□ 0.07
RTN1-208ENST00000557422 ZSWIM8A7E2V4 1837 aa15.52■□□□□ 0.07
RTN1-208ENST00000557422 SPDYE5A6NIY4 337 aa15.51■□□□□ 0.07
RTN1-208ENST00000557422 GNRH1P01148 92 aa15.51■□□□□ 0.07
RTN1-208ENST00000557422 CETPP11597 493 aa15.51■□□□□ 0.07
RTN1-208ENST00000557422 LDHAL6AQ6ZMR3 332 aa15.51■□□□□ 0.07
RTN1-208ENST00000557422 ZCCHC17Q9NP64 241 aaKnown RBP15.51■□□□□ 0.07
RTN1-208ENST00000557422 BTBD19C9JJ37 291 aa15.5■□□□□ 0.07
RTN1-208ENST00000557422 CRKP46108 304 aa15.5■□□□□ 0.07
RTN1-208ENST00000557422 TNNI2P48788 182 aa15.5■□□□□ 0.07
RTN1-208ENST00000557422 LMBR1LQ6UX01 489 aa15.5■□□□□ 0.07
RTN1-208ENST00000557422 SHISA4Q96DD7 197 aa15.5■□□□□ 0.07
RTN1-208ENST00000557422 CNNM1Q9NRU3 951 aa15.5■□□□□ 0.07
RTN1-208ENST00000557422 RBM27Q9P2N5 1060 aaKnown RBP15.5■□□□□ 0.07
RTN1-208ENST00000557422 ARAP2Q8WZ64 1704 aa15.49■□□□□ 0.07
RTN1-208ENST00000557422 HIBADHP31937 336 aaKnown RBP15.49■□□□□ 0.07
RTN1-208ENST00000557422 GYG1P46976 350 aa15.49■□□□□ 0.07
RTN1-208ENST00000557422 PRMT2P55345 433 aa15.49■□□□□ 0.07
RTN1-208ENST00000557422 MTFR1Q15390 333 aa15.49■□□□□ 0.07
RTN1-208ENST00000557422 CCDC57Q2TAC2 916 aa15.49■□□□□ 0.07
RTN1-208ENST00000557422 EPHA10Q5JZY3 1008 aa15.49■□□□□ 0.07
RTN1-208ENST00000557422 ERO1BQ86YB8 467 aa15.49■□□□□ 0.07
RTN1-208ENST00000557422 DPF3Q92784 378 aa15.49■□□□□ 0.07
RTN1-208ENST00000557422 FAM84BQ96KN1 310 aaPredicted RBP15.49■□□□□ 0.07
RTN1-208ENST00000557422 PRKRIP1Q9H875 184 aaPredicted RBP15.49■□□□□ 0.07
RTN1-208ENST00000557422 SNCAIPQ9Y6H5 919 aa15.49■□□□□ 0.07
RTN1-208ENST00000557422 RANBP2P49792 3224 aaKnown RBP15.48■□□□□ 0.07
RTN1-208ENST00000557422 IRF6O14896 467 aa15.48■□□□□ 0.07
RTN1-208ENST00000557422 SNAPC2Q13487 334 aa15.48■□□□□ 0.07
RTN1-208ENST00000557422 UBE4AQ14139 1066 aa15.48■□□□□ 0.07
RTN1-208ENST00000557422 GRIK5Q16478 980 aa15.48■□□□□ 0.07
RTN1-208ENST00000557422 TAF7LQ5H9L4 462 aa15.48■□□□□ 0.07
RTN1-208ENST00000557422 ECM2O94769 699 aaPredicted RBP15.47■□□□□ 0.07
RTN1-208ENST00000557422 CTGFP29279 349 aa15.47■□□□□ 0.07
RTN1-208ENST00000557422 C17orf99Q6UX52 265 aa15.47■□□□□ 0.07
RTN1-208ENST00000557422 UBE2Q1Q7Z7E8 422 aa15.47■□□□□ 0.07
RTN1-208ENST00000557422 ZKSCAN4Q969J2 545 aaPredicted RBP15.47■□□□□ 0.07
RTN1-208ENST00000557422 TRIM47Q96LD4 638 aa15.47■□□□□ 0.07
RTN1-208ENST00000557422 WRNIP1Q96S55 665 aa15.47■□□□□ 0.07
RTN1-208ENST00000557422 SRRDQ9UH36 339 aa15.47■□□□□ 0.07
RTN1-208ENST00000557422 F6X3S4 739 aa15.46■□□□□ 0.07
RTN1-208ENST00000557422 CACNB3P54284 484 aa15.46■□□□□ 0.07
RTN1-208ENST00000557422 HDLBPQ00341 1268 aaKnown RBP15.46■□□□□ 0.07
RTN1-208ENST00000557422 PPIL2Q13356 520 aa15.46■□□□□ 0.07
RTN1-208ENST00000557422 CCDC27Q2M243 656 aa15.46■□□□□ 0.07
RTN1-208ENST00000557422 BEND3Q5T5X7 828 aa15.46■□□□□ 0.07
RTN1-208ENST00000557422 WWC1Q8IX03 1113 aa15.46■□□□□ 0.07
RTN1-208ENST00000557422 PRO3102Q9H379 93 aa15.46■□□□□ 0.07
RTN1-208ENST00000557422 CPA4Q9UI42 421 aa15.46■□□□□ 0.07
RTN1-208ENST00000557422 CACNA1FO60840 1977 aa15.45■□□□□ 0.06
RTN1-208ENST00000557422 PSMC4P43686 418 aa15.45■□□□□ 0.06
RTN1-208ENST00000557422 NKX2-3Q8TAU0 364 aa15.45■□□□□ 0.06
RTN1-208ENST00000557422 IL16Q14005 1332 aa15.44■□□□□ 0.06
RTN1-208ENST00000557422 GRM8O00222 908 aa15.44■□□□□ 0.06
RTN1-208ENST00000557422 GJB1P08034 283 aa15.44■□□□□ 0.06
RTN1-208ENST00000557422 CCL5P13501 91 aa15.44■□□□□ 0.06
RTN1-208ENST00000557422 OSBPP22059 807 aa15.44■□□□□ 0.06
RTN1-208ENST00000557422 HOXD10P28358 340 aa15.44■□□□□ 0.06
RTN1-208ENST00000557422 GRK4P32298 578 aa15.44■□□□□ 0.06
RTN1-208ENST00000557422 GJA8P48165 433 aa15.44■□□□□ 0.06
RTN1-208ENST00000557422 FKBP1CQ5VVH2 108 aa15.44■□□□□ 0.06
RTN1-208ENST00000557422 FBXO33Q7Z6M2 555 aa15.44■□□□□ 0.06
RTN1-208ENST00000557422 FAM83AQ86UY5 434 aa15.44■□□□□ 0.06
RTN1-208ENST00000557422 TEKT1Q969V4 418 aa15.44■□□□□ 0.06
RTN1-208ENST00000557422 HOOK2Q96ED9 719 aa15.44■□□□□ 0.06
RTN1-208ENST00000557422 PUS3Q9BZE2 481 aaKnown RBP15.44■□□□□ 0.06
RTN1-208ENST00000557422 IQSEC3Q9UPP2 1182 aaPredicted RBP15.44■□□□□ 0.06
RTN1-208ENST00000557422 RIPOR2Q9Y4F9 1068 aa15.44■□□□□ 0.06
RTN1-208ENST00000557422 DLL1O00548 723 aa15.43■□□□□ 0.06
RTN1-208ENST00000557422 VAMP4O75379 141 aa15.43■□□□□ 0.06
RTN1-208ENST00000557422 CHAF1AQ13111 956 aaPredicted RBP15.43■□□□□ 0.06
RTN1-208ENST00000557422 ANKRD23Q86SG2 305 aa15.43■□□□□ 0.06
RTN1-208ENST00000557422 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.43■□□□□ 0.06
RTN1-208ENST00000557422 SLC17A8Q8NDX2 589 aa15.43■□□□□ 0.06
RTN1-208ENST00000557422 RAET1EQ8TD07 263 aa15.43■□□□□ 0.06
RTN1-208ENST00000557422 HTATIP2Q9BUP3 242 aa15.43■□□□□ 0.06
RTN1-208ENST00000557422 MRIQ9BWK5 157 aa15.43■□□□□ 0.06
RTN1-208ENST00000557422 ADGRA2Q96PE1 1338 aa15.43■□□□□ 0.06
RTN1-208ENST00000557422 PDHXO00330 501 aa15.42■□□□□ 0.06
RTN1-208ENST00000557422 FMNL1O95466 1100 aaPredicted RBP15.42■□□□□ 0.06
RTN1-208ENST00000557422 PPATQ06203 517 aa15.42■□□□□ 0.06
RTN1-208ENST00000557422 DCAF15Q66K64 600 aa15.42■□□□□ 0.06
RTN1-208ENST00000557422 APOBEC3HQ6NTF7 200 aaKnown RBP15.42■□□□□ 0.06
RTN1-208ENST00000557422 TBC1D22AQ8WUA7 517 aa15.42■□□□□ 0.06
RTN1-208ENST00000557422 ZDHHC15Q96MV8 337 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms