RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 DZIP1LQ8IYY4 767 aaKnown RBP16.06■□□□□ 0.16
PSEN1-221ENST00000557293 TSR2Q969E8 191 aaKnown RBP16.06■□□□□ 0.16
PSEN1-221ENST00000557293 SERPINA10Q9UK55 444 aa16.06■□□□□ 0.16
PSEN1-221ENST00000557293 SPDYE5A6NIY4 337 aa16.05■□□□□ 0.16
PSEN1-221ENST00000557293 TCP10L2B9ZVM9 353 aa16.05■□□□□ 0.16
PSEN1-221ENST00000557293 DDX10Q13206 875 aaKnown RBP16.05■□□□□ 0.16
PSEN1-221ENST00000557293 TNFAIP1Q13829 316 aa16.05■□□□□ 0.16
PSEN1-221ENST00000557293 EPHA10Q5JZY3 1008 aa16.05■□□□□ 0.16
PSEN1-221ENST00000557293 LINS1Q8NG48 757 aa16.05■□□□□ 0.16
PSEN1-221ENST00000557293 ZNF594Q96JF6 807 aaPredicted RBP16.05■□□□□ 0.16
PSEN1-221ENST00000557293 STK31Q9BXU1 1019 aa16.05■□□□□ 0.16
PSEN1-221ENST00000557293 TTF2Q9UNY4 1162 aaKnown RBP16.05■□□□□ 0.16
PSEN1-221ENST00000557293 SNCAIPQ9Y6H5 919 aa16.05■□□□□ 0.16
PSEN1-221ENST00000557293 A0A1B0GUL6 1792 aa16.05■□□□□ 0.16
PSEN1-221ENST00000557293 C17orf99Q6UX52 265 aa16.04■□□□□ 0.16
PSEN1-221ENST00000557293 DNAAF4Q8WXU2 420 aa16.04■□□□□ 0.16
PSEN1-221ENST00000557293 FAM84BQ96KN1 310 aaPredicted RBP16.04■□□□□ 0.16
PSEN1-221ENST00000557293 FLIIQ13045 1269 aa16.03■□□□□ 0.16
PSEN1-221ENST00000557293 IFIT5Q13325 482 aaKnown RBP16.03■□□□□ 0.16
PSEN1-221ENST00000557293 MFSD14BQ5SR56 506 aa16.03■□□□□ 0.16
PSEN1-221ENST00000557293 ZCCHC17Q9NP64 241 aaKnown RBP16.03■□□□□ 0.16
PSEN1-221ENST00000557293 SZT2Q5T011 3432 aa16.03■□□□□ 0.16
PSEN1-221ENST00000557293 DLL1O00548 723 aa16.02■□□□□ 0.16
PSEN1-221ENST00000557293 IRF6O14896 467 aa16.02■□□□□ 0.16
PSEN1-221ENST00000557293 PLIN1O60240 522 aa16.02■□□□□ 0.16
PSEN1-221ENST00000557293 GNRH1P01148 92 aa16.02■□□□□ 0.16
PSEN1-221ENST00000557293 CETPP11597 493 aa16.02■□□□□ 0.16
PSEN1-221ENST00000557293 CRKP46108 304 aa16.02■□□□□ 0.16
PSEN1-221ENST00000557293 GYG1P46976 350 aa16.02■□□□□ 0.16
PSEN1-221ENST00000557293 PRMT2P55345 433 aa16.02■□□□□ 0.16
PSEN1-221ENST00000557293 TWISTNBQ3B726 338 aaPredicted RBP16.02■□□□□ 0.16
PSEN1-221ENST00000557293 LMBR1LQ6UX01 489 aa16.02■□□□□ 0.16
PSEN1-221ENST00000557293 ERO1BQ86YB8 467 aa16.02■□□□□ 0.16
PSEN1-221ENST00000557293 DPF3Q92784 378 aa16.02■□□□□ 0.16
PSEN1-221ENST00000557293 TRIM47Q96LD4 638 aa16.02■□□□□ 0.16
PSEN1-221ENST00000557293 MYH16Q9H6N6 1097 aa16.02■□□□□ 0.16
PSEN1-221ENST00000557293 ZKSCAN4Q969J2 545 aaPredicted RBP16.01■□□□□ 0.15
PSEN1-221ENST00000557293 SRRDQ9UH36 339 aa16.01■□□□□ 0.15
PSEN1-221ENST00000557293 CSADQ9Y600 493 aa16.01■□□□□ 0.15
PSEN1-221ENST00000557293 ADGRA2Q96PE1 1338 aa16■□□□□ 0.15
PSEN1-221ENST00000557293 ECM2O94769 699 aaPredicted RBP16■□□□□ 0.15
PSEN1-221ENST00000557293 HIBADHP31937 336 aaKnown RBP16■□□□□ 0.15
PSEN1-221ENST00000557293 GJA8P48165 433 aa16■□□□□ 0.15
PSEN1-221ENST00000557293 CACNB3P54284 484 aa16■□□□□ 0.15
PSEN1-221ENST00000557293 UBE4AQ14139 1066 aa16■□□□□ 0.15
PSEN1-221ENST00000557293 KIF22Q14807 665 aa16■□□□□ 0.15
PSEN1-221ENST00000557293 BEND3Q5T5X7 828 aa16■□□□□ 0.15
PSEN1-221ENST00000557293 LDHAL6AQ6ZMR3 332 aa16■□□□□ 0.15
PSEN1-221ENST00000557293 ARAP2Q8WZ64 1704 aa15.99■□□□□ 0.15
PSEN1-221ENST00000557293 GJB1P08034 283 aa15.99■□□□□ 0.15
PSEN1-221ENST00000557293 OSBPP22059 807 aa15.99■□□□□ 0.15
PSEN1-221ENST00000557293 PSMC4P43686 418 aa15.99■□□□□ 0.15
PSEN1-221ENST00000557293 TNNI2P48788 182 aa15.99■□□□□ 0.15
PSEN1-221ENST00000557293 FKBP5Q13451 457 aaPredicted RBP15.99■□□□□ 0.15
PSEN1-221ENST00000557293 SNAPC2Q13487 334 aa15.99■□□□□ 0.15
PSEN1-221ENST00000557293 MOGSQ13724 837 aa15.99■□□□□ 0.15
PSEN1-221ENST00000557293 FBXO33Q7Z6M2 555 aa15.99■□□□□ 0.15
PSEN1-221ENST00000557293 SLC17A8Q8NDX2 589 aa15.99■□□□□ 0.15
PSEN1-221ENST00000557293 PUS3Q9BZE2 481 aaKnown RBP15.99■□□□□ 0.15
PSEN1-221ENST00000557293 CPA4Q9UI42 421 aa15.99■□□□□ 0.15
PSEN1-221ENST00000557293 SOX1O00570 391 aaPredicted RBP15.98■□□□□ 0.15
PSEN1-221ENST00000557293 ZBTB7BO15156 539 aaPredicted RBP15.98■□□□□ 0.15
PSEN1-221ENST00000557293 CCL5P13501 91 aa15.98■□□□□ 0.15
PSEN1-221ENST00000557293 GRK4P32298 578 aa15.98■□□□□ 0.15
PSEN1-221ENST00000557293 HDLBPQ00341 1268 aaKnown RBP15.98■□□□□ 0.15
PSEN1-221ENST00000557293 PPIL2Q13356 520 aa15.98■□□□□ 0.15
PSEN1-221ENST00000557293 PRKRIP1Q9H875 184 aaPredicted RBP15.98■□□□□ 0.15
PSEN1-221ENST00000557293 CHMP3Q9Y3E7 222 aa15.98■□□□□ 0.15
PSEN1-221ENST00000557293 F6X3S4 739 aa15.97■□□□□ 0.15
PSEN1-221ENST00000557293 APOBEC3HQ6NTF7 200 aaKnown RBP15.97■□□□□ 0.15
PSEN1-221ENST00000557293 NKX2-3Q8TAU0 364 aa15.97■□□□□ 0.15
PSEN1-221ENST00000557293 WRNIP1Q96S55 665 aa15.97■□□□□ 0.15
PSEN1-221ENST00000557293 MRIQ9BWK5 157 aa15.97■□□□□ 0.15
PSEN1-221ENST00000557293 CNNM1Q9NRU3 951 aa15.97■□□□□ 0.15
PSEN1-221ENST00000557293 RIPOR2Q9Y4F9 1068 aa15.97■□□□□ 0.15
PSEN1-221ENST00000557293 VAMP4O75379 141 aa15.96■□□□□ 0.15
PSEN1-221ENST00000557293 WDHD1O75717 1129 aaPredicted RBP15.96■□□□□ 0.15
PSEN1-221ENST00000557293 INPP5BP32019 993 aa15.96■□□□□ 0.15
PSEN1-221ENST00000557293 PPATQ06203 517 aa15.96■□□□□ 0.15
PSEN1-221ENST00000557293 CCDC57Q2TAC2 916 aa15.96■□□□□ 0.15
PSEN1-221ENST00000557293 ANKRD23Q86SG2 305 aa15.96■□□□□ 0.15
PSEN1-221ENST00000557293 FAM83AQ86UY5 434 aa15.96■□□□□ 0.15
PSEN1-221ENST00000557293 WWC1Q8IX03 1113 aa15.96■□□□□ 0.15
PSEN1-221ENST00000557293 IQSEC3Q9UPP2 1182 aaPredicted RBP15.96■□□□□ 0.15
PSEN1-221ENST00000557293 KCNH4Q9UQ05 1017 aa15.96■□□□□ 0.15
PSEN1-221ENST00000557293 CCDC27Q2M243 656 aa15.95■□□□□ 0.14
PSEN1-221ENST00000557293 FKBP1CQ5VVH2 108 aa15.95■□□□□ 0.14
PSEN1-221ENST00000557293 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.95■□□□□ 0.14
PSEN1-221ENST00000557293 KAZALD1Q96I82 304 aa15.95■□□□□ 0.14
PSEN1-221ENST00000557293 HTATIP2Q9BUP3 242 aa15.95■□□□□ 0.14
PSEN1-221ENST00000557293 RNF208Q9H0X6 261 aa15.95■□□□□ 0.14
PSEN1-221ENST00000557293 ZNF112Q9UJU3 913 aa15.95■□□□□ 0.14
PSEN1-221ENST00000557293 RANBP2P49792 3224 aaKnown RBP15.95■□□□□ 0.14
PSEN1-221ENST00000557293 PDHXO00330 501 aa15.94■□□□□ 0.14
PSEN1-221ENST00000557293 HOXD10P28358 340 aa15.94■□□□□ 0.14
PSEN1-221ENST00000557293 GPAT2Q6NUI2 795 aa15.94■□□□□ 0.14
PSEN1-221ENST00000557293 MIGA2Q7L4E1 593 aa15.94■□□□□ 0.14
PSEN1-221ENST00000557293 U2AF1L4Q8WU68 220 aaKnown RBP15.94■□□□□ 0.14
PSEN1-221ENST00000557293 LRCH3Q96II8 777 aa15.94■□□□□ 0.14
PSEN1-221ENST00000557293 ZDHHC15Q96MV8 337 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms