RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 ECM29Q5VYK3 1845 aa19.9■□□□□ 0.78
TUBB3-213ENST00000557262 IFIT1P09914 478 aaKnown RBP19.9■□□□□ 0.78
TUBB3-213ENST00000557262 CHAF1AQ13111 956 aaPredicted RBP19.9■□□□□ 0.78
TUBB3-213ENST00000557262 PKN2Q16513 984 aaKnown RBP19.9■□□□□ 0.78
TUBB3-213ENST00000557262 WNK4Q96J92 1243 aa19.9■□□□□ 0.78
TUBB3-213ENST00000557262 SSC5DA1L4H1 1573 aa19.9■□□□□ 0.78
TUBB3-213ENST00000557262 EYA2O00167 538 aa19.89■□□□□ 0.77
TUBB3-213ENST00000557262 FGFR2P21802 821 aa19.89■□□□□ 0.77
TUBB3-213ENST00000557262 RFX5P48382 616 aaPredicted RBP19.89■□□□□ 0.77
TUBB3-213ENST00000557262 PUM3Q15397 648 aaKnown RBP19.89■□□□□ 0.77
TUBB3-213ENST00000557262 GRIK5Q16478 980 aa19.89■□□□□ 0.77
TUBB3-213ENST00000557262 ANKRD13AQ8IZ07 590 aa19.89■□□□□ 0.77
TUBB3-213ENST00000557262 MRIQ9BWK5 157 aa19.89■□□□□ 0.77
TUBB3-213ENST00000557262 KIF16BQ96L93 1317 aa19.88■□□□□ 0.77
TUBB3-213ENST00000557262 TNNI2P48788 182 aa19.88■□□□□ 0.77
TUBB3-213ENST00000557262 IFNL1Q8IU54 200 aa19.88■□□□□ 0.77
TUBB3-213ENST00000557262 R3HDMLQ9H3Y0 253 aa19.88■□□□□ 0.77
TUBB3-213ENST00000557262 NOB1Q9ULX3 412 aaKnown RBP19.88■□□□□ 0.77
TUBB3-213ENST00000557262 TCP10L2B9ZVM9 353 aa19.87■□□□□ 0.77
TUBB3-213ENST00000557262 CCER2I3L3R5 266 aa19.87■□□□□ 0.77
TUBB3-213ENST00000557262 FKTNO75072 461 aa19.87■□□□□ 0.77
TUBB3-213ENST00000557262 UBTFL1P0CB47 393 aaPredicted RBP19.87■□□□□ 0.77
TUBB3-213ENST00000557262 TEKT1Q969V4 418 aa19.87■□□□□ 0.77
TUBB3-213ENST00000557262 TEPSINQ96N21 525 aa19.87■□□□□ 0.77
TUBB3-213ENST00000557262 SLC5A1P13866 664 aa19.86■□□□□ 0.77
TUBB3-213ENST00000557262 LPIN2Q92539 896 aa19.86■□□□□ 0.77
TUBB3-213ENST00000557262 API5Q9BZZ5 524 aaKnown RBP19.86■□□□□ 0.77
TUBB3-213ENST00000557262 FBXO3Q9UK99 471 aa19.86■□□□□ 0.77
TUBB3-213ENST00000557262 HDAC5Q9UQL6 1122 aa19.86■□□□□ 0.77
TUBB3-213ENST00000557262 SUGT1Q9Y2Z0 365 aa19.86■□□□□ 0.77
TUBB3-213ENST00000557262 ATG9AQ7Z3C6 839 aa19.85■□□□□ 0.77
TUBB3-213ENST00000557262 TMEM39BQ9GZU3 492 aa19.85■□□□□ 0.77
TUBB3-213ENST00000557262 HPS5Q9UPZ3 1129 aa19.85■□□□□ 0.77
TUBB3-213ENST00000557262 OTUD7BQ6GQQ9 843 aa19.84■□□□□ 0.77
TUBB3-213ENST00000557262 ZDHHC15Q96MV8 337 aa19.84■□□□□ 0.77
TUBB3-213ENST00000557262 MAST3O60307 1309 aa19.83■□□□□ 0.77
TUBB3-213ENST00000557262 IGF2BP3O00425 579 aaKnown RBP eCLIP19.83■□□□□ 0.77
TUBB3-213ENST00000557262 CIAO1O76071 339 aa19.83■□□□□ 0.77
TUBB3-213ENST00000557262 GJA5P36382 358 aa19.83■□□□□ 0.77
TUBB3-213ENST00000557262 MAP3K9P80192 1104 aa19.83■□□□□ 0.77
TUBB3-213ENST00000557262 HHIPL2Q6UWX4 724 aa19.83■□□□□ 0.77
TUBB3-213ENST00000557262 CDAN1Q8IWY9 1227 aa19.83■□□□□ 0.77
TUBB3-213ENST00000557262 WDR66Q8TBY9 1149 aa19.83■□□□□ 0.77
TUBB3-213ENST00000557262 ELP3Q9H9T3 547 aa19.83■□□□□ 0.77
TUBB3-213ENST00000557262 CEP126Q9P2H0 1117 aa19.83■□□□□ 0.77
TUBB3-213ENST00000557262 TESPA1A2RU30 521 aaPredicted RBP19.82■□□□□ 0.76
TUBB3-213ENST00000557262 SOX10P56693 466 aa19.82■□□□□ 0.76
TUBB3-213ENST00000557262 APOBEC3HQ6NTF7 200 aaKnown RBP19.82■□□□□ 0.76
TUBB3-213ENST00000557262 FBXO46Q6PJ61 603 aaPredicted RBP19.82■□□□□ 0.76
TUBB3-213ENST00000557262 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.82■□□□□ 0.76
TUBB3-213ENST00000557262 OPTNQ96CV9 577 aa19.82■□□□□ 0.76
TUBB3-213ENST00000557262 TMOD2Q9NZR1 351 aa19.82■□□□□ 0.76
TUBB3-213ENST00000557262 ARAP2Q8WZ64 1704 aa19.82■□□□□ 0.76
TUBB3-213ENST00000557262 RARSP54136 660 aaKnown RBP19.81■□□□□ 0.76
TUBB3-213ENST00000557262 CACNB3P54284 484 aa19.81■□□□□ 0.76
TUBB3-213ENST00000557262 FKBP1CQ5VVH2 108 aa19.81■□□□□ 0.76
TUBB3-213ENST00000557262 SIL1Q9H173 461 aa19.81■□□□□ 0.76
TUBB3-213ENST00000557262 LRRFIP2Q9Y608 721 aaKnown RBP19.81■□□□□ 0.76
TUBB3-213ENST00000557262 FAM83AQ86UY5 434 aa19.8■□□□□ 0.76
TUBB3-213ENST00000557262 ARHGAP45Q92619 1136 aa19.8■□□□□ 0.76
TUBB3-213ENST00000557262 PTPN18Q99952 460 aa19.8■□□□□ 0.76
TUBB3-213ENST00000557262 GNL3LQ9NVN8 582 aaKnown RBP19.8■□□□□ 0.76
TUBB3-213ENST00000557262 IL15P40933 162 aaPredicted RBP19.79■□□□□ 0.76
TUBB3-213ENST00000557262 ATP2B3Q16720 1220 aa19.79■□□□□ 0.76
TUBB3-213ENST00000557262 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.79■□□□□ 0.76
TUBB3-213ENST00000557262 HOOK2Q96ED9 719 aa19.79■□□□□ 0.76
TUBB3-213ENST00000557262 MS4A4AQ96JQ5 239 aa19.79■□□□□ 0.76
TUBB3-213ENST00000557262 CSADQ9Y600 493 aa19.79■□□□□ 0.76
TUBB3-213ENST00000557262 VGLL4Q14135 290 aa19.78■□□□□ 0.76
TUBB3-213ENST00000557262 INTS3Q68E01 1043 aaKnown RBP19.78■□□□□ 0.76
TUBB3-213ENST00000557262 COPRSQ9NQ92 184 aa19.78■□□□□ 0.76
TUBB3-213ENST00000557262 TNRC18O15417 2968 aaPredicted RBP19.78■□□□□ 0.76
TUBB3-213ENST00000557262 GTF2A2P52657 109 aa19.77■□□□□ 0.76
TUBB3-213ENST00000557262 CRHR2Q13324 411 aa19.77■□□□□ 0.76
TUBB3-213ENST00000557262 CNKSR2Q8WXI2 1034 aa19.77■□□□□ 0.76
TUBB3-213ENST00000557262 MEIS3Q99687 375 aa19.77■□□□□ 0.76
TUBB3-213ENST00000557262 PA2G4Q9UQ80 394 aaKnown RBP19.77■□□□□ 0.76
TUBB3-213ENST00000557262 TRIM17Q9Y577 477 aa19.77■□□□□ 0.76
TUBB3-213ENST00000557262 ERO1AQ96HE7 468 aa19.76■□□□□ 0.75
TUBB3-213ENST00000557262 DENND2AQ9ULE3 1009 aa19.76■□□□□ 0.75
TUBB3-213ENST00000557262 LAMB1P07942 1786 aa19.75■□□□□ 0.75
TUBB3-213ENST00000557262 SEMA3EO15041 775 aa19.75■□□□□ 0.75
TUBB3-213ENST00000557262 LDHBP07195 334 aaKnown RBP19.75■□□□□ 0.75
TUBB3-213ENST00000557262 GNAI3P08754 354 aa19.75■□□□□ 0.75
TUBB3-213ENST00000557262 DCAF15Q66K64 600 aa19.75■□□□□ 0.75
TUBB3-213ENST00000557262 OTOP1Q7RTM1 612 aa19.75■□□□□ 0.75
TUBB3-213ENST00000557262 BRI3BPQ8WY22 251 aa19.75■□□□□ 0.75
TUBB3-213ENST00000557262 DAGLAQ9Y4D2 1042 aa19.75■□□□□ 0.75
TUBB3-213ENST00000557262 OTOFQ9HC10 1997 aa19.74■□□□□ 0.75
TUBB3-213ENST00000557262 CCL15-CCL14A0A0B4J2E2 113 aa19.74■□□□□ 0.75
TUBB3-213ENST00000557262 SPDYE5A6NIY4 337 aa19.74■□□□□ 0.75
TUBB3-213ENST00000557262 ZBTB22O15209 634 aa19.74■□□□□ 0.75
TUBB3-213ENST00000557262 IPO8O15397 1037 aaKnown RBP19.74■□□□□ 0.75
TUBB3-213ENST00000557262 PRDX5P30044 214 aa19.74■□□□□ 0.75
TUBB3-213ENST00000557262 PHKA1P46020 1223 aa19.74■□□□□ 0.75
TUBB3-213ENST00000557262 SP3Q02447 781 aa19.74■□□□□ 0.75
TUBB3-213ENST00000557262 DIXDC1Q155Q3 683 aa19.74■□□□□ 0.75
TUBB3-213ENST00000557262 CCL15Q16663 113 aa19.74■□□□□ 0.75
TUBB3-213ENST00000557262 ERO1BQ86YB8 467 aa19.74■□□□□ 0.75
TUBB3-213ENST00000557262 FAM151AQ8WW52 585 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms