RNA–Protein interactions for RNA: ENST00000557261.1

FOXN3-215, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-215ENST00000557261 CHD2O14647 1828 aaKnown RBP8.03□□□□□ -1.12
FOXN3-215ENST00000557261 TOPAZ1Q8N9V7 1692 aa8.03□□□□□ -1.12
FOXN3-215ENST00000557261 ANP32CO43423 234 aa8.03□□□□□ -1.12
FOXN3-215ENST00000557261 MARCH6O60337 910 aa8.03□□□□□ -1.12
FOXN3-215ENST00000557261 TNFRSF21O75509 655 aa8.03□□□□□ -1.12
FOXN3-215ENST00000557261 MICAL2O94851 1124 aa8.03□□□□□ -1.12
FOXN3-215ENST00000557261 ADH1CP00326 375 aa8.03□□□□□ -1.12
FOXN3-215ENST00000557261 ZNF280CQ8ND82 737 aa8.03□□□□□ -1.12
FOXN3-215ENST00000557261 C7orf43Q8WVR3 580 aa8.03□□□□□ -1.12
FOXN3-215ENST00000557261 TRIM56Q9BRZ2 755 aaKnown RBP8.03□□□□□ -1.12
FOXN3-215ENST00000557261 POLR3GLQ9BT43 218 aa8.03□□□□□ -1.12
FOXN3-215ENST00000557261 KBTBD4Q9NVX7 518 aa8.03□□□□□ -1.12
FOXN3-215ENST00000557261 ITSN1Q15811 1721 aa8.03□□□□□ -1.12
FOXN3-215ENST00000557261 MEN1O00255 615 aa8.02□□□□□ -1.13
FOXN3-215ENST00000557261 ADH1AP07327 375 aa8.02□□□□□ -1.13
FOXN3-215ENST00000557261 CLN3Q13286 438 aa8.02□□□□□ -1.13
FOXN3-215ENST00000557261 TRIP4Q15650 581 aaPredicted RBP8.02□□□□□ -1.13
FOXN3-215ENST00000557261 VPS37DQ86XT2 251 aa8.02□□□□□ -1.13
FOXN3-215ENST00000557261 HSH2DQ96JZ2 352 aa8.02□□□□□ -1.13
FOXN3-215ENST00000557261 K7ELQ4 463 aaPredicted RBP8.01□□□□□ -1.13
FOXN3-215ENST00000557261 PCSK2P16519 638 aa8.01□□□□□ -1.13
FOXN3-215ENST00000557261 SERINC3Q13530 473 aa8.01□□□□□ -1.13
FOXN3-215ENST00000557261 MICAL1Q8TDZ2 1067 aa8.01□□□□□ -1.13
FOXN3-215ENST00000557261 HPS1Q92902 700 aa8.01□□□□□ -1.13
FOXN3-215ENST00000557261 NPHS2Q9NP85 383 aa8.01□□□□□ -1.13
FOXN3-215ENST00000557261 ADAMTS1Q9UHI8 967 aa8.01□□□□□ -1.13
FOXN3-215ENST00000557261 EID1Q9Y6B2 187 aa8.01□□□□□ -1.13
FOXN3-215ENST00000557261 MRVI1Q9Y6F6 885 aa8.01□□□□□ -1.13
FOXN3-215ENST00000557261 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.01□□□□□ -1.13
FOXN3-215ENST00000557261 MON2Q7Z3U7 1717 aa8□□□□□ -1.13
FOXN3-215ENST00000557261 ATP7BP35670 1465 aa8□□□□□ -1.13
FOXN3-215ENST00000557261 PARD3Q8TEW0 1356 aa8□□□□□ -1.13
FOXN3-215ENST00000557261 AKAP12Q02952 1782 aa8□□□□□ -1.13
FOXN3-215ENST00000557261 EIF5BO60841 1220 aaKnown RBP8□□□□□ -1.13
FOXN3-215ENST00000557261 ETFBP38117 255 aa8□□□□□ -1.13
FOXN3-215ENST00000557261 NBPF15Q8N660 670 aa8□□□□□ -1.13
FOXN3-215ENST00000557261 PRKRIP1Q9H875 184 aaPredicted RBP8□□□□□ -1.13
FOXN3-215ENST00000557261 ZNF408Q9H9D4 720 aa8□□□□□ -1.13
FOXN3-215ENST00000557261 ZFYVE28Q9HCC9 887 aa8□□□□□ -1.13
FOXN3-215ENST00000557261 EVC2Q86UK5 1308 aa8□□□□□ -1.13
FOXN3-215ENST00000557261 PTPROQ16827 1216 aa7.99□□□□□ -1.13
FOXN3-215ENST00000557261 CDC42BPGQ6DT37 1551 aa7.99□□□□□ -1.13
FOXN3-215ENST00000557261 BCO2Q9BYV7 579 aa7.99□□□□□ -1.13
FOXN3-215ENST00000557261 ZNF395Q9H8N7 513 aaPredicted RBP7.99□□□□□ -1.13
FOXN3-215ENST00000557261 ATP13A2Q9NQ11 1180 aa7.99□□□□□ -1.13
FOXN3-215ENST00000557261 TMEM63CQ9P1W3 806 aa7.99□□□□□ -1.13
FOXN3-215ENST00000557261 FAM8A1Q9UBU6 413 aa7.99□□□□□ -1.13
FOXN3-215ENST00000557261 KIF20BQ96Q89 1820 aa7.99□□□□□ -1.13
FOXN3-215ENST00000557261 NSD2O96028 1365 aa7.98□□□□□ -1.13
FOXN3-215ENST00000557261 INSRP06213 1382 aa7.98□□□□□ -1.13
FOXN3-215ENST00000557261 METP08581 1390 aa7.98□□□□□ -1.13
FOXN3-215ENST00000557261 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.98□□□□□ -1.13
FOXN3-215ENST00000557261 ALDH1A1P00352 501 aa7.98□□□□□ -1.13
FOXN3-215ENST00000557261 PTGIRP43119 386 aa7.98□□□□□ -1.13
FOXN3-215ENST00000557261 PLA2G4AP47712 749 aa7.98□□□□□ -1.13
FOXN3-215ENST00000557261 NASPP49321 788 aaPredicted RBP7.98□□□□□ -1.13
FOXN3-215ENST00000557261 MAP3K10Q02779 954 aa7.98□□□□□ -1.13
FOXN3-215ENST00000557261 NR5A1Q13285 461 aa7.98□□□□□ -1.13
FOXN3-215ENST00000557261 RALBP1Q15311 655 aa7.98□□□□□ -1.13
FOXN3-215ENST00000557261 SOGA3Q5TF21 947 aa7.98□□□□□ -1.13
FOXN3-215ENST00000557261 KANSL2Q9H9L4 492 aa7.98□□□□□ -1.13
FOXN3-215ENST00000557261 PGPEP1Q9NXJ5 209 aa7.98□□□□□ -1.13
FOXN3-215ENST00000557261 NKTRP30414 1462 aaKnown RBP7.98□□□□□ -1.13
FOXN3-215ENST00000557261 ANKRD36BQ8N2N9 1353 aa7.97□□□□□ -1.13
FOXN3-215ENST00000557261 NRKQ7Z2Y5 1582 aa7.97□□□□□ -1.13
FOXN3-215ENST00000557261 EREGO14944 169 aa7.97□□□□□ -1.13
FOXN3-215ENST00000557261 GRNP28799 593 aaKnown RBP7.97□□□□□ -1.13
FOXN3-215ENST00000557261 LTKP29376 864 aa7.97□□□□□ -1.13
FOXN3-215ENST00000557261 IDH3AP50213 366 aa7.97□□□□□ -1.13
FOXN3-215ENST00000557261 RELBQ01201 579 aa7.97□□□□□ -1.13
FOXN3-215ENST00000557261 TMEM132EQ6IEE7 984 aa7.97□□□□□ -1.13
FOXN3-215ENST00000557261 TTC16Q8NEE8 873 aa7.97□□□□□ -1.13
FOXN3-215ENST00000557261 RHPN1Q8TCX5 695 aa7.97□□□□□ -1.13
FOXN3-215ENST00000557261 MRFAP1L1Q96HT8 127 aa7.97□□□□□ -1.13
FOXN3-215ENST00000557261 SUSD3Q96L08 255 aa7.97□□□□□ -1.13
FOXN3-215ENST00000557261 RNPC3Q96LT9 517 aaKnown RBP7.97□□□□□ -1.13
FOXN3-215ENST00000557261 ZSCAN10Q96SZ4 725 aaPredicted RBP7.97□□□□□ -1.13
FOXN3-215ENST00000557261 NIFKQ9BYG3 293 aaKnown RBP7.97□□□□□ -1.13
FOXN3-215ENST00000557261 CHRDQ9H2X0 955 aa7.97□□□□□ -1.13
FOXN3-215ENST00000557261 KLHL42Q9P2K6 505 aa7.97□□□□□ -1.13
FOXN3-215ENST00000557261 TRAK1Q9UPV9 953 aa7.97□□□□□ -1.13
FOXN3-215ENST00000557261 FMN2Q9NZ56 1722 aa7.97□□□□□ -1.13
FOXN3-215ENST00000557261 ZNF335Q9H4Z2 1342 aaPredicted RBP7.97□□□□□ -1.13
FOXN3-215ENST00000557261 BRD4O60885 1362 aaPredicted RBP7.97□□□□□ -1.13
FOXN3-215ENST00000557261 USP54Q70EL1 1684 aa7.96□□□□□ -1.13
FOXN3-215ENST00000557261 NALCNQ8IZF0 1738 aa7.96□□□□□ -1.14
FOXN3-215ENST00000557261 MINDY4BA8MYZ0 360 aa7.96□□□□□ -1.14
FOXN3-215ENST00000557261 UBAP1LF5GYI3 381 aa7.96□□□□□ -1.14
FOXN3-215ENST00000557261 ST13P50502 369 aaKnown RBP7.96□□□□□ -1.14
FOXN3-215ENST00000557261 C1orf53Q5VUE5 145 aa7.96□□□□□ -1.14
FOXN3-215ENST00000557261 TMEM214Q6NUQ4 689 aaKnown RBP7.96□□□□□ -1.14
FOXN3-215ENST00000557261 ZNF438Q7Z4V0 828 aa7.96□□□□□ -1.14
FOXN3-215ENST00000557261 CKAP2LQ8IYA6 745 aa7.96□□□□□ -1.14
FOXN3-215ENST00000557261 CMTR1Q8N1G2 835 aaKnown RBP7.96□□□□□ -1.14
FOXN3-215ENST00000557261 RASGRP4Q8TDF6 673 aa7.96□□□□□ -1.14
FOXN3-215ENST00000557261 KCNB2Q92953 911 aa7.96□□□□□ -1.14
FOXN3-215ENST00000557261 EAF1Q96JC9 268 aaPredicted RBP7.96□□□□□ -1.14
FOXN3-215ENST00000557261 SPON2Q9BUD6 331 aa7.96□□□□□ -1.14
FOXN3-215ENST00000557261 LATS2Q9NRM7 1088 aa7.96□□□□□ -1.14
FOXN3-215ENST00000557261 GINM1Q9NU53 330 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms