RNA–Protein interactions for RNA: ENST00000557249.1

PTPN21-209, Transcript of protein tyrosine phosphatase, non-receptor type 21, human

TSL 2

Gene PTPN21, Length 576 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN21-209	ENST00000557249	ZC3H7B	Q9UGR2	993 aa	Known RBP	4.16	□□□□□ -1.74
PTPN21-209	ENST00000557249	SUPT5H	O00267	1087 aa	Known RBP	4.15	□□□□□ -1.75
PTPN21-209	ENST00000557249	PHACTR2	O75167	634 aa		4.15	□□□□□ -1.75
PTPN21-209	ENST00000557249	PAPLN	O95428	1278 aa		4.15	□□□□□ -1.75
PTPN21-209	ENST00000557249	ESRRA	P11474	423 aa	Predicted RBP	4.15	□□□□□ -1.75
PTPN21-209	ENST00000557249	ADH5	P11766	374 aa		4.15	□□□□□ -1.75
PTPN21-209	ENST00000557249	FAM69C	Q0P6D2	419 aa		4.15	□□□□□ -1.75
PTPN21-209	ENST00000557249	AAMP	Q13685	434 aa		4.15	□□□□□ -1.75
PTPN21-209	ENST00000557249	COL19A1	Q14993	1142 aa		4.15	□□□□□ -1.75
PTPN21-209	ENST00000557249	ZNF792	Q3KQV3	632 aa		4.15	□□□□□ -1.75
PTPN21-209	ENST00000557249	CYP27C1	Q4G0S4	372 aa		4.15	□□□□□ -1.75
PTPN21-209	ENST00000557249	FBLN7	Q53RD9	439 aa		4.15	□□□□□ -1.75
PTPN21-209	ENST00000557249	ZNF765	Q7L2R6	523 aa		4.15	□□□□□ -1.75
PTPN21-209	ENST00000557249	VN1R5	Q7Z5H4	357 aa		4.15	□□□□□ -1.75
PTPN21-209	ENST00000557249	DDX54	Q8TDD1	881 aa	Known RBP	4.15	□□□□□ -1.75
PTPN21-209	ENST00000557249	ZKSCAN3	Q9BRR0	538 aa		4.15	□□□□□ -1.75
PTPN21-209	ENST00000557249	ZNF777	Q9ULD5	760 aa	Predicted RBP	4.15	□□□□□ -1.75
PTPN21-209	ENST00000557249	ZMIZ1	Q9ULJ6	1067 aa		4.15	□□□□□ -1.75
PTPN21-209	ENST00000557249	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	4.14	□□□□□ -1.75
PTPN21-209	ENST00000557249	DLGAP3	O95886	979 aa		4.14	□□□□□ -1.75
PTPN21-209	ENST00000557249	CYP11A1	P05108	521 aa		4.14	□□□□□ -1.75
PTPN21-209	ENST00000557249	NOM1	Q5C9Z4	860 aa	Known RBP	4.14	□□□□□ -1.75
PTPN21-209	ENST00000557249	AKAP4	Q5JQC9	854 aa		4.14	□□□□□ -1.75
PTPN21-209	ENST00000557249	BCL7C	Q8WUZ0	217 aa	Predicted RBP	4.14	□□□□□ -1.75
PTPN21-209	ENST00000557249	MISP3	Q96FF7	219 aa		4.14	□□□□□ -1.75
PTPN21-209	ENST00000557249	ACTL7B	Q9Y614	415 aa		4.14	□□□□□ -1.75
PTPN21-209	ENST00000557249	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	4.14	□□□□□ -1.75
PTPN21-209	ENST00000557249		A6NHS1	94 aa		4.13	□□□□□ -1.75
PTPN21-209	ENST00000557249	EREG	O14944	169 aa		4.13	□□□□□ -1.75
PTPN21-209	ENST00000557249	PDGFA	P04085	211 aa		4.13	□□□□□ -1.75
PTPN21-209	ENST00000557249	MZF1	P28698	734 aa	Predicted RBP	4.13	□□□□□ -1.75
PTPN21-209	ENST00000557249	ASPA	P45381	313 aa		4.13	□□□□□ -1.75
PTPN21-209	ENST00000557249	POU4F3	Q15319	338 aa		4.13	□□□□□ -1.75
PTPN21-209	ENST00000557249	ALKBH2	Q6NS38	261 aa		4.13	□□□□□ -1.75
PTPN21-209	ENST00000557249	ATG4D	Q86TL0	474 aa	Predicted RBP	4.13	□□□□□ -1.75
PTPN21-209	ENST00000557249	FAM168A	Q92567	244 aa		4.13	□□□□□ -1.75
PTPN21-209	ENST00000557249	CLP1	Q92989	425 aa	Known RBP	4.13	□□□□□ -1.75
PTPN21-209	ENST00000557249	BHLHE41	Q9C0J9	482 aa	Predicted RBP	4.13	□□□□□ -1.75
PTPN21-209	ENST00000557249	GGNBP2	Q9H3C7	697 aa		4.13	□□□□□ -1.75
PTPN21-209	ENST00000557249	RC3H2	Q9HBD1	1191 aa	Known RBP	4.13	□□□□□ -1.75
PTPN21-209	ENST00000557249	AP4E1	Q9UPM8	1137 aa		4.13	□□□□□ -1.75
PTPN21-209	ENST00000557249	DAGLA	Q9Y4D2	1042 aa		4.13	□□□□□ -1.75
PTPN21-209	ENST00000557249	ATP2B4	P23634	1241 aa		4.12	□□□□□ -1.75
PTPN21-209	ENST00000557249	MAOB	P27338	520 aa		4.12	□□□□□ -1.75
PTPN21-209	ENST00000557249	EHHADH	Q08426	723 aa		4.12	□□□□□ -1.75
PTPN21-209	ENST00000557249	TMEM164	Q5U3C3	297 aa		4.12	□□□□□ -1.75
PTPN21-209	ENST00000557249	OGFOD3	Q6PK18	319 aa		4.12	□□□□□ -1.75
PTPN21-209	ENST00000557249	ZNF574	Q6ZN55	896 aa	Predicted RBP	4.12	□□□□□ -1.75
PTPN21-209	ENST00000557249	ARHGAP27	Q6ZUM4	889 aa		4.12	□□□□□ -1.75
PTPN21-209	ENST00000557249	SNX29	Q8TEQ0	813 aa		4.12	□□□□□ -1.75
PTPN21-209	ENST00000557249	TMEM40	Q8WWA1	233 aa		4.12	□□□□□ -1.75
PTPN21-209	ENST00000557249	GATA6	Q92908	595 aa		4.12	□□□□□ -1.75
PTPN21-209	ENST00000557249	CORO1B	Q9BR76	489 aa		4.12	□□□□□ -1.75
PTPN21-209	ENST00000557249	CHRD	Q9H2X0	955 aa		4.12	□□□□□ -1.75
PTPN21-209	ENST00000557249	SEMA6C	Q9H3T2	930 aa		4.12	□□□□□ -1.75
PTPN21-209	ENST00000557249	SEPT3	Q9UH03	358 aa		4.12	□□□□□ -1.75
PTPN21-209	ENST00000557249	ATG7	O95352	703 aa		4.11	□□□□□ -1.75
PTPN21-209	ENST00000557249	PCDH1	Q08174	1060 aa		4.11	□□□□□ -1.75
PTPN21-209	ENST00000557249	PI4K2B	Q8TCG2	481 aa		4.11	□□□□□ -1.75
PTPN21-209	ENST00000557249	HELQ	Q8TDG4	1101 aa		4.11	□□□□□ -1.75
PTPN21-209	ENST00000557249	ACSS3	Q9H6R3	686 aa		4.11	□□□□□ -1.75
PTPN21-209	ENST00000557249	LGR6	Q9HBX8	967 aa		4.11	□□□□□ -1.75
PTPN21-209	ENST00000557249	AMOTL2	Q9Y2J4	779 aa		4.11	□□□□□ -1.75
PTPN21-209	ENST00000557249	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	4.11	□□□□□ -1.75
PTPN21-209	ENST00000557249	TNFRSF21	O75509	655 aa		4.1	□□□□□ -1.75
PTPN21-209	ENST00000557249	USP5	P45974	858 aa		4.1	□□□□□ -1.75
PTPN21-209	ENST00000557249	EIF1AX	P47813	144 aa	Known RBP	4.1	□□□□□ -1.75
PTPN21-209	ENST00000557249	HNRNPU	Q00839	825 aa	Known RBP eCLIP	4.1	□□□□□ -1.75
PTPN21-209	ENST00000557249	BNIP3	Q12983	259 aa		4.1	□□□□□ -1.75
PTPN21-209	ENST00000557249	PDE3A	Q14432	1141 aa		4.1	□□□□□ -1.75
PTPN21-209	ENST00000557249	KRTAP19-4	Q3LI73	84 aa		4.1	□□□□□ -1.75
PTPN21-209	ENST00000557249	SPRED2	Q7Z698	418 aa		4.1	□□□□□ -1.75
PTPN21-209	ENST00000557249	NETO1	Q8TDF5	533 aa		4.1	□□□□□ -1.75
PTPN21-209	ENST00000557249	FAM84A	Q96KN4	292 aa		4.1	□□□□□ -1.75
PTPN21-209	ENST00000557249	CLEC4M	Q9H2X3	399 aa	Predicted RBP	4.1	□□□□□ -1.75
PTPN21-209	ENST00000557249	PIDD1	Q9HB75	910 aa		4.1	□□□□□ -1.75
PTPN21-209	ENST00000557249	FAM105A	Q9NUU6	356 aa		4.1	□□□□□ -1.75
PTPN21-209	ENST00000557249	POLI	Q9UNA4	740 aa		4.1	□□□□□ -1.75
PTPN21-209	ENST00000557249	CARMIL2	Q6F5E8	1435 aa		4.1	□□□□□ -1.75
PTPN21-209	ENST00000557249	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	4.09	□□□□□ -1.75
PTPN21-209	ENST00000557249		A0A096LPE4	126 aa		4.09	□□□□□ -1.75
PTPN21-209	ENST00000557249		A0A1W2PPZ6	126 aa		4.09	□□□□□ -1.75
PTPN21-209	ENST00000557249	METTL12	A8MUP2	240 aa		4.09	□□□□□ -1.75
PTPN21-209	ENST00000557249	FUT4	P22083	530 aa		4.09	□□□□□ -1.75
PTPN21-209	ENST00000557249	MPST	P25325	297 aa		4.09	□□□□□ -1.75
PTPN21-209	ENST00000557249	SPOCD1	Q6ZMY3	1216 aa		4.09	□□□□□ -1.75
PTPN21-209	ENST00000557249	KRTAP4-2	Q9BYR5	136 aa		4.09	□□□□□ -1.75
PTPN21-209	ENST00000557249	VAV3	Q9UKW4	847 aa		4.09	□□□□□ -1.75
PTPN21-209	ENST00000557249	LRRC10B	A6NIK2	292 aa		4.08	□□□□□ -1.76
PTPN21-209	ENST00000557249	RNASE1	P07998	156 aa	Known RBP	4.08	□□□□□ -1.76
PTPN21-209	ENST00000557249	CD8B	P10966	210 aa		4.08	□□□□□ -1.76
PTPN21-209	ENST00000557249	PLD6	Q8N2A8	252 aa	Known RBP	4.08	□□□□□ -1.76
PTPN21-209	ENST00000557249	GLIS3	Q8NEA6	775 aa		4.08	□□□□□ -1.76
PTPN21-209	ENST00000557249	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	4.08	□□□□□ -1.76
PTPN21-209	ENST00000557249	TOX2	Q96NM4	488 aa		4.08	□□□□□ -1.76
PTPN21-209	ENST00000557249	NRSN2	Q9GZP1	204 aa		4.08	□□□□□ -1.76
PTPN21-209	ENST00000557249	LATS2	Q9NRM7	1088 aa		4.08	□□□□□ -1.76
PTPN21-209	ENST00000557249	C1GALT1	Q9NS00	363 aa		4.08	□□□□□ -1.76
PTPN21-209	ENST00000557249	FAM53C	Q9NYF3	392 aa		4.08	□□□□□ -1.76
PTPN21-209	ENST00000557249	FOXD3	Q9UJU5	478 aa	Predicted RBP	4.08	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms