RNA–Protein interactions for RNA: ENST00000557177.1

VRTN-202, Transcript of vertebrae development associated, humanhuman

TSL 4

Gene VRTN, Length 521 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRTN-202ENST00000557177 LRRC24Q50LG9 513 aa18.17■□□□□ 0.5
VRTN-202ENST00000557177 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.17■□□□□ 0.5
VRTN-202ENST00000557177 PTPRCP08575 1304 aa18.17■□□□□ 0.5
VRTN-202ENST00000557177 TESPA1A2RU30 521 aaPredicted RBP18.16■□□□□ 0.5
VRTN-202ENST00000557177 CRKP46108 304 aa18.16■□□□□ 0.5
VRTN-202ENST00000557177 GRIK5Q16478 980 aa18.16■□□□□ 0.5
VRTN-202ENST00000557177 CDAN1Q8IWY9 1227 aa18.16■□□□□ 0.5
VRTN-202ENST00000557177 MKI67P46013 3256 aaKnown RBP18.16■□□□□ 0.5
VRTN-202ENST00000557177 PDE8BO95263 885 aa18.15■□□□□ 0.5
VRTN-202ENST00000557177 METTL24Q5JXM2 366 aa18.15■□□□□ 0.5
VRTN-202ENST00000557177 PTPN18Q99952 460 aa18.15■□□□□ 0.5
VRTN-202ENST00000557177 HDLBPQ00341 1268 aaKnown RBP18.14■□□□□ 0.49
VRTN-202ENST00000557177 OTOP1Q7RTM1 612 aa18.14■□□□□ 0.49
VRTN-202ENST00000557177 VPS37DQ86XT2 251 aa18.14■□□□□ 0.49
VRTN-202ENST00000557177 TBC1D22AQ8WUA7 517 aa18.14■□□□□ 0.49
VRTN-202ENST00000557177 OPTNQ96CV9 577 aa18.14■□□□□ 0.49
VRTN-202ENST00000557177 TMEM39BQ9GZU3 492 aa18.14■□□□□ 0.49
VRTN-202ENST00000557177 ELP3Q9H9T3 547 aa18.14■□□□□ 0.49
VRTN-202ENST00000557177 IQSEC3Q9UPP2 1182 aaPredicted RBP18.14■□□□□ 0.49
VRTN-202ENST00000557177 TCP10L2B9ZVM9 353 aa18.13■□□□□ 0.49
VRTN-202ENST00000557177 CRHR2Q13324 411 aa18.13■□□□□ 0.49
VRTN-202ENST00000557177 CAVIN4Q5BKX8 364 aa18.13■□□□□ 0.49
VRTN-202ENST00000557177 OTUD7BQ6GQQ9 843 aa18.13■□□□□ 0.49
VRTN-202ENST00000557177 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.13■□□□□ 0.49
VRTN-202ENST00000557177 KLHDC4Q8TBB5 520 aa18.13■□□□□ 0.49
VRTN-202ENST00000557177 SSH1Q8WYL5 1049 aa18.13■□□□□ 0.49
VRTN-202ENST00000557177 MS4A4AQ96JQ5 239 aa18.13■□□□□ 0.49
VRTN-202ENST00000557177 USP44Q9H0E7 712 aa18.13■□□□□ 0.49
VRTN-202ENST00000557177 TRIM17Q9Y577 477 aa18.13■□□□□ 0.49
VRTN-202ENST00000557177 KIF16BQ96L93 1317 aa18.13■□□□□ 0.49
VRTN-202ENST00000557177 E9PSI1 815 aa18.12■□□□□ 0.49
VRTN-202ENST00000557177 TNNI2P48788 182 aa18.12■□□□□ 0.49
VRTN-202ENST00000557177 CHAF1AQ13111 956 aaPredicted RBP18.12■□□□□ 0.49
VRTN-202ENST00000557177 PRPF38BQ5VTL8 546 aaKnown RBP18.12■□□□□ 0.49
VRTN-202ENST00000557177 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.12■□□□□ 0.49
VRTN-202ENST00000557177 FGFR2P21802 821 aa18.11■□□□□ 0.49
VRTN-202ENST00000557177 BCAMP50895 628 aa18.11■□□□□ 0.49
VRTN-202ENST00000557177 VGLL4Q14135 290 aa18.11■□□□□ 0.49
VRTN-202ENST00000557177 TEKT1Q969V4 418 aa18.11■□□□□ 0.49
VRTN-202ENST00000557177 ERO1AQ96HE7 468 aa18.11■□□□□ 0.49
VRTN-202ENST00000557177 MRIQ9BWK5 157 aa18.11■□□□□ 0.49
VRTN-202ENST00000557177 RBBP6Q7Z6E9 1792 aaKnown RBP18.11■□□□□ 0.49
VRTN-202ENST00000557177 MYH13Q9UKX3 1938 aa18.11■□□□□ 0.49
VRTN-202ENST00000557177 FRAT2O75474 233 aaPredicted RBP18.1■□□□□ 0.49
VRTN-202ENST00000557177 PUM3Q15397 648 aaKnown RBP18.1■□□□□ 0.49
VRTN-202ENST00000557177 CD99L2Q8TCZ2 262 aa18.1■□□□□ 0.49
VRTN-202ENST00000557177 CNKSR2Q8WXI2 1034 aa18.1■□□□□ 0.49
VRTN-202ENST00000557177 ZDHHC15Q96MV8 337 aa18.1■□□□□ 0.49
VRTN-202ENST00000557177 SUGT1Q9Y2Z0 365 aa18.1■□□□□ 0.49
VRTN-202ENST00000557177 RFX5P48382 616 aaPredicted RBP18.09■□□□□ 0.49
VRTN-202ENST00000557177 CACNB3P54284 484 aa18.09■□□□□ 0.49
VRTN-202ENST00000557177 MAP3K9P80192 1104 aa18.09■□□□□ 0.49
VRTN-202ENST00000557177 CAP1Q01518 475 aa18.09■□□□□ 0.49
VRTN-202ENST00000557177 SLFN5Q08AF3 891 aa18.09■□□□□ 0.49
VRTN-202ENST00000557177 BRI3BPQ8WY22 251 aa18.09■□□□□ 0.49
VRTN-202ENST00000557177 PTPN22Q9Y2R2 807 aa18.09■□□□□ 0.49
VRTN-202ENST00000557177 MAST3O60307 1309 aa18.08■□□□□ 0.49
VRTN-202ENST00000557177 SP3Q02447 781 aa18.08■□□□□ 0.48
VRTN-202ENST00000557177 FKBP1CQ5VVH2 108 aa18.08■□□□□ 0.48
VRTN-202ENST00000557177 APOBEC3HQ6NTF7 200 aaKnown RBP18.08■□□□□ 0.48
VRTN-202ENST00000557177 FAM83AQ86UY5 434 aa18.08■□□□□ 0.48
VRTN-202ENST00000557177 CSADQ9Y600 493 aa18.08■□□□□ 0.48
VRTN-202ENST00000557177 RPAP1Q9BWH6 1393 aaPredicted RBP18.07■□□□□ 0.48
VRTN-202ENST00000557177 EYA2O00167 538 aa18.07■□□□□ 0.48
VRTN-202ENST00000557177 IFIT1P09914 478 aaKnown RBP18.07■□□□□ 0.48
VRTN-202ENST00000557177 GTF2A2P52657 109 aa18.07■□□□□ 0.48
VRTN-202ENST00000557177 ALDH1L2Q3SY69 923 aa18.07■□□□□ 0.48
VRTN-202ENST00000557177 INTS3Q68E01 1043 aaKnown RBP18.07■□□□□ 0.48
VRTN-202ENST00000557177 CCL15-CCL14A0A0B4J2E2 113 aa18.06■□□□□ 0.48
VRTN-202ENST00000557177 SPDYE5A6NIY4 337 aa18.06■□□□□ 0.48
VRTN-202ENST00000557177 CCL15Q16663 113 aa18.06■□□□□ 0.48
VRTN-202ENST00000557177 HHIPL2Q6UWX4 724 aa18.06■□□□□ 0.48
VRTN-202ENST00000557177 ATG9AQ7Z3C6 839 aa18.06■□□□□ 0.48
VRTN-202ENST00000557177 LPIN2Q92539 896 aa18.06■□□□□ 0.48
VRTN-202ENST00000557177 OTUD5Q96G74 571 aa18.06■□□□□ 0.48
VRTN-202ENST00000557177 EFCC1Q9HA90 598 aa18.06■□□□□ 0.48
VRTN-202ENST00000557177 TMOD2Q9NZR1 351 aa18.06■□□□□ 0.48
VRTN-202ENST00000557177 SNCAIPQ9Y6H5 919 aa18.06■□□□□ 0.48
VRTN-202ENST00000557177 FAM43AQ8N2R8 423 aa18.05■□□□□ 0.48
VRTN-202ENST00000557177 ARMC5Q96C12 935 aa18.05■□□□□ 0.48
VRTN-202ENST00000557177 POTEFA5A3E0 1075 aa18.04■□□□□ 0.48
VRTN-202ENST00000557177 SLC5A1P13866 664 aa18.04■□□□□ 0.48
VRTN-202ENST00000557177 TAF1CQ15572 869 aaPredicted RBP18.04■□□□□ 0.48
VRTN-202ENST00000557177 TRMT2AQ8IZ69 625 aaKnown RBP18.04■□□□□ 0.48
VRTN-202ENST00000557177 WDR66Q8TBY9 1149 aa18.04■□□□□ 0.48
VRTN-202ENST00000557177 HOOK2Q96ED9 719 aa18.04■□□□□ 0.48
VRTN-202ENST00000557177 WRNIP1Q96S55 665 aa18.04■□□□□ 0.48
VRTN-202ENST00000557177 ZFYVE28Q9HCC9 887 aa18.04■□□□□ 0.48
VRTN-202ENST00000557177 ERO1BQ86YB8 467 aa18.03■□□□□ 0.48
VRTN-202ENST00000557177 ZKSCAN4Q969J2 545 aaPredicted RBP18.03■□□□□ 0.48
VRTN-202ENST00000557177 CDCA7LQ96GN5 454 aa18.03■□□□□ 0.48
VRTN-202ENST00000557177 SMC4Q9NTJ3 1288 aa18.03■□□□□ 0.48
VRTN-202ENST00000557177 FBXO3Q9UK99 471 aa18.03■□□□□ 0.48
VRTN-202ENST00000557177 CIAO1O76071 339 aa18.02■□□□□ 0.48
VRTN-202ENST00000557177 ZCCHC17Q9NP64 241 aaKnown RBP18.02■□□□□ 0.48
VRTN-202ENST00000557177 KIAA0100Q14667 2235 aaKnown RBP18.02■□□□□ 0.47
VRTN-202ENST00000557177 ZSWIM8A7E2V4 1837 aa18.01■□□□□ 0.47
VRTN-202ENST00000557177 IRF6O14896 467 aa18.01■□□□□ 0.47
VRTN-202ENST00000557177 CETPP11597 493 aa18.01■□□□□ 0.47
VRTN-202ENST00000557177 PPIL2Q13356 520 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms