RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 CEP350Q5VT06 3117 aa12.56□□□□□ -0.4
HNRNPC-228ENST00000557033 USP17L3A6NCW0 530 aa12.56□□□□□ -0.4
HNRNPC-228ENST00000557033 USP17L4A6NCW7 530 aa12.56□□□□□ -0.4
HNRNPC-228ENST00000557033 IRS4O14654 1257 aaPredicted RBP12.56□□□□□ -0.4
HNRNPC-228ENST00000557033 USP17L2Q6R6M4 530 aa12.56□□□□□ -0.4
HNRNPC-228ENST00000557033 DPP8Q6V1X1 898 aaPredicted RBP12.56□□□□□ -0.4
HNRNPC-228ENST00000557033 KSR2Q6VAB6 950 aa12.56□□□□□ -0.4
HNRNPC-228ENST00000557033 USP17L1Q7RTZ2 530 aa12.56□□□□□ -0.4
HNRNPC-228ENST00000557033 PLEKHM2Q8IWE5 1019 aa12.56□□□□□ -0.4
HNRNPC-228ENST00000557033 MPNDQ8N594 471 aa12.56□□□□□ -0.4
HNRNPC-228ENST00000557033 MYD88Q99836 296 aa12.56□□□□□ -0.4
HNRNPC-228ENST00000557033 TAF1DQ9H5J8 278 aaPredicted RBP12.56□□□□□ -0.4
HNRNPC-228ENST00000557033 KIAA1522Q9P206 1035 aaPredicted RBP12.56□□□□□ -0.4
HNRNPC-228ENST00000557033 ZNF541Q9H0D2 1346 aa12.56□□□□□ -0.4
HNRNPC-228ENST00000557033 FBXO45P0C2W1 286 aa12.55□□□□□ -0.4
HNRNPC-228ENST00000557033 PNMA8AQ86V59 439 aaPredicted RBP12.55□□□□□ -0.4
HNRNPC-228ENST00000557033 CWC25Q9NXE8 425 aaPredicted RBP12.55□□□□□ -0.4
HNRNPC-228ENST00000557033 HACL1Q9UJ83 578 aa12.55□□□□□ -0.4
HNRNPC-228ENST00000557033 DDX60Q8IY21 1712 aaKnown RBP12.54□□□□□ -0.4
HNRNPC-228ENST00000557033 PI4KAP2A4QPH2 592 aa12.54□□□□□ -0.4
HNRNPC-228ENST00000557033 FAM196BA6NMK8 535 aa12.54□□□□□ -0.4
HNRNPC-228ENST00000557033 PPIP5K2O43314 1243 aa12.54□□□□□ -0.4
HNRNPC-228ENST00000557033 PCCAP05165 728 aaPredicted RBP12.54□□□□□ -0.4
HNRNPC-228ENST00000557033 SKIP12755 728 aa12.54□□□□□ -0.4
HNRNPC-228ENST00000557033 DESI1Q6ICB0 168 aa12.54□□□□□ -0.4
HNRNPC-228ENST00000557033 LDHDQ86WU2 507 aa12.54□□□□□ -0.4
HNRNPC-228ENST00000557033 NIM1KQ8IY84 436 aa12.54□□□□□ -0.4
HNRNPC-228ENST00000557033 FAM9BQ8IZU0 186 aa12.54□□□□□ -0.4
HNRNPC-228ENST00000557033 PI4KAP1Q8N8J0 262 aa12.54□□□□□ -0.4
HNRNPC-228ENST00000557033 ZNRF3Q9ULT6 936 aa12.54□□□□□ -0.4
HNRNPC-228ENST00000557033 MAP3K2Q9Y2U5 619 aa12.54□□□□□ -0.4
HNRNPC-228ENST00000557033 ZBBXA8MT70 800 aa12.53□□□□□ -0.4
HNRNPC-228ENST00000557033 PDE8AO60658 829 aa12.53□□□□□ -0.4
HNRNPC-228ENST00000557033 VAMP4O75379 141 aa12.53□□□□□ -0.4
HNRNPC-228ENST00000557033 EPHX2P34913 555 aa12.53□□□□□ -0.4
HNRNPC-228ENST00000557033 RPS8P62241 208 aaKnown RBP12.53□□□□□ -0.4
HNRNPC-228ENST00000557033 NEXNQ0ZGT2 675 aa12.53□□□□□ -0.4
HNRNPC-228ENST00000557033 RETREG3Q86VR2 466 aa12.53□□□□□ -0.4
HNRNPC-228ENST00000557033 MRRFQ96E11 262 aaKnown RBP12.53□□□□□ -0.4
HNRNPC-228ENST00000557033 SALL2Q9Y467 1007 aaPredicted RBP12.53□□□□□ -0.4
HNRNPC-228ENST00000557033 FANCIQ9NVI1 1328 aa12.53□□□□□ -0.4
HNRNPC-228ENST00000557033 USP17L5A8MUK1 530 aa12.52□□□□□ -0.41
HNRNPC-228ENST00000557033 POTEIP0CG38 1075 aa12.52□□□□□ -0.41
HNRNPC-228ENST00000557033 KIAA2012Q0VF49 1180 aa12.52□□□□□ -0.41
HNRNPC-228ENST00000557033 AOC3Q16853 763 aa12.52□□□□□ -0.41
HNRNPC-228ENST00000557033 NOM1Q5C9Z4 860 aaKnown RBP12.52□□□□□ -0.41
HNRNPC-228ENST00000557033 LYPD8Q6UX82 237 aa12.52□□□□□ -0.41
HNRNPC-228ENST00000557033 SLC51AQ86UW1 340 aa12.52□□□□□ -0.41
HNRNPC-228ENST00000557033 CELF1Q92879 486 aaKnown RBP12.52□□□□□ -0.41
HNRNPC-228ENST00000557033 KLRG1Q96E93 195 aa12.52□□□□□ -0.41
HNRNPC-228ENST00000557033 MYH16Q9H6N6 1097 aa12.52□□□□□ -0.41
HNRNPC-228ENST00000557033 GJA3Q9Y6H8 435 aa12.52□□□□□ -0.41
HNRNPC-228ENST00000557033 COL4A5P29400 1685 aa12.51□□□□□ -0.41
HNRNPC-228ENST00000557033 TAF1P21675 1872 aa12.51□□□□□ -0.41
HNRNPC-228ENST00000557033 CACNA1FO60840 1977 aa12.51□□□□□ -0.41
HNRNPC-228ENST00000557033 SOWAHDA6NJG2 315 aa12.51□□□□□ -0.41
HNRNPC-228ENST00000557033 IGKV5-2P06315 115 aa12.51□□□□□ -0.41
HNRNPC-228ENST00000557033 POTEJP0CG39 1038 aa12.51□□□□□ -0.41
HNRNPC-228ENST00000557033 HTRA3P83110 453 aa12.51□□□□□ -0.41
HNRNPC-228ENST00000557033 CCDC152Q4G0S7 254 aa12.51□□□□□ -0.41
HNRNPC-228ENST00000557033 G2E3Q7L622 706 aa12.51□□□□□ -0.41
HNRNPC-228ENST00000557033 NSFL1CQ9UNZ2 370 aaKnown RBP12.51□□□□□ -0.41
HNRNPC-228ENST00000557033 CDHR2Q9BYE9 1310 aa12.51□□□□□ -0.41
HNRNPC-228ENST00000557033 EXOSC9Q06265 439 aaKnown RBP12.5□□□□□ -0.41
HNRNPC-228ENST00000557033 CXCL9Q07325 125 aa12.5□□□□□ -0.41
HNRNPC-228ENST00000557033 TNIP1Q15025 636 aa12.5□□□□□ -0.41
HNRNPC-228ENST00000557033 CRTC2Q53ET0 693 aaPredicted RBP12.5□□□□□ -0.41
HNRNPC-228ENST00000557033 EAPPQ56P03 285 aaPredicted RBP12.5□□□□□ -0.41
HNRNPC-228ENST00000557033 JMYQ8N9B5 988 aa12.5□□□□□ -0.41
HNRNPC-228ENST00000557033 CLP1Q92989 425 aaKnown RBP12.5□□□□□ -0.41
HNRNPC-228ENST00000557033 ZBED2Q9BTP6 218 aa12.5□□□□□ -0.41
HNRNPC-228ENST00000557033 MKRN1Q9UHC7 482 aaKnown RBP12.5□□□□□ -0.41
HNRNPC-228ENST00000557033 LRRC37AA6NMS7 1700 aa12.49□□□□□ -0.41
HNRNPC-228ENST00000557033 NEURL1BA8MQ27 555 aa12.49□□□□□ -0.41
HNRNPC-228ENST00000557033 USP17L15C9J2P7 530 aa12.49□□□□□ -0.41
HNRNPC-228ENST00000557033 USP17L10C9JJH3 530 aa12.49□□□□□ -0.41
HNRNPC-228ENST00000557033 USP17L13C9JLJ4 530 aa12.49□□□□□ -0.41
HNRNPC-228ENST00000557033 USP17L12C9JPN9 530 aa12.49□□□□□ -0.41
HNRNPC-228ENST00000557033 USP17L11C9JVI0 530 aa12.49□□□□□ -0.41
HNRNPC-228ENST00000557033 USP17L21D6R901 530 aa12.49□□□□□ -0.41
HNRNPC-228ENST00000557033 USP17L18D6R9N7 530 aa12.49□□□□□ -0.41
HNRNPC-228ENST00000557033 USP17L22D6RA61 530 aa12.49□□□□□ -0.41
HNRNPC-228ENST00000557033 USP17L17D6RBQ6 530 aa12.49□□□□□ -0.41
HNRNPC-228ENST00000557033 USP17L19D6RCP7 530 aa12.49□□□□□ -0.41
HNRNPC-228ENST00000557033 USP17L20D6RJB6 530 aa12.49□□□□□ -0.41
HNRNPC-228ENST00000557033 H7C1W4 665 aa12.49□□□□□ -0.41
HNRNPC-228ENST00000557033 ITGBL1O95965 494 aaPredicted RBP12.49□□□□□ -0.41
HNRNPC-228ENST00000557033 ZNF16P17020 682 aaPredicted RBP12.49□□□□□ -0.41
HNRNPC-228ENST00000557033 SCNN1DP51172 638 aa12.49□□□□□ -0.41
HNRNPC-228ENST00000557033 USP17L24Q0WX57 530 aa12.49□□□□□ -0.41
HNRNPC-228ENST00000557033 CIAPIN1Q6FI81 312 aa12.49□□□□□ -0.41
HNRNPC-228ENST00000557033 USP50Q70EL3 339 aaPredicted RBP12.49□□□□□ -0.41
HNRNPC-228ENST00000557033 EYA3Q99504 573 aa12.49□□□□□ -0.41
HNRNPC-228ENST00000557033 PASKQ96RG2 1323 aa12.48□□□□□ -0.41
HNRNPC-228ENST00000557033 CFHP08603 1231 aa12.48□□□□□ -0.41
HNRNPC-228ENST00000557033 SLC4A3P48751 1232 aa12.48□□□□□ -0.41
HNRNPC-228ENST00000557033 GPSM2P81274 684 aa12.48□□□□□ -0.41
HNRNPC-228ENST00000557033 PTK7Q13308 1070 aa12.48□□□□□ -0.41
HNRNPC-228ENST00000557033 FKBP5Q13451 457 aaPredicted RBP12.48□□□□□ -0.41
HNRNPC-228ENST00000557033 CNTROBQ8N137 903 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms