RNA–Protein interactions for RNA: ENST00000556929.5

TMEM260-213, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-213ENST00000556929 GSPT1P15170 499 aaKnown RBP11.79□□□□□ -0.52
TMEM260-213ENST00000556929 MAP3K12Q12852 859 aa11.79□□□□□ -0.52
TMEM260-213ENST00000556929 MFSD14BQ5SR56 506 aa11.79□□□□□ -0.52
TMEM260-213ENST00000556929 C9orf131Q5VYM1 1079 aa11.79□□□□□ -0.52
TMEM260-213ENST00000556929 ERICH6Q7L0X2 663 aa11.79□□□□□ -0.52
TMEM260-213ENST00000556929 KBTBD3Q8NAB2 608 aa11.79□□□□□ -0.52
TMEM260-213ENST00000556929 FSD1Q9BTV5 496 aa11.79□□□□□ -0.52
TMEM260-213ENST00000556929 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.79□□□□□ -0.52
TMEM260-213ENST00000556929 LRP2BPQ9P2M1 347 aa11.79□□□□□ -0.52
TMEM260-213ENST00000556929 JAG2Q9Y219 1238 aa11.79□□□□□ -0.52
TMEM260-213ENST00000556929 MYH2Q9UKX2 1941 aa11.79□□□□□ -0.52
TMEM260-213ENST00000556929 LDHBP07195 334 aaKnown RBP11.78□□□□□ -0.52
TMEM260-213ENST00000556929 SDSP20132 328 aa11.78□□□□□ -0.52
TMEM260-213ENST00000556929 CXCL9Q07325 125 aa11.78□□□□□ -0.52
TMEM260-213ENST00000556929 DACT2Q5SW24 774 aa11.78□□□□□ -0.52
TMEM260-213ENST00000556929 TICAM2Q86XR7 235 aa11.78□□□□□ -0.52
TMEM260-213ENST00000556929 ANTXR1Q9H6X2 564 aa11.78□□□□□ -0.52
TMEM260-213ENST00000556929 KCNQ5Q9NR82 932 aa11.78□□□□□ -0.52
TMEM260-213ENST00000556929 RAI14Q9P0K7 980 aa11.78□□□□□ -0.52
TMEM260-213ENST00000556929 SUGT1Q9Y2Z0 365 aa11.78□□□□□ -0.52
TMEM260-213ENST00000556929 ZC3H4Q9UPT8 1303 aaKnown RBP11.78□□□□□ -0.52
TMEM260-213ENST00000556929 HIP1O00291 1037 aa11.77□□□□□ -0.53
TMEM260-213ENST00000556929 PSMD14O00487 310 aa11.77□□□□□ -0.53
TMEM260-213ENST00000556929 IDH1O75874 414 aaKnown RBP11.77□□□□□ -0.53
TMEM260-213ENST00000556929 VIL1P09327 827 aaKnown RBP11.77□□□□□ -0.53
TMEM260-213ENST00000556929 DPY19L2Q6NUT2 758 aa11.77□□□□□ -0.53
TMEM260-213ENST00000556929 RSBN1LQ6PCB5 846 aaPredicted RBP11.77□□□□□ -0.53
TMEM260-213ENST00000556929 TMED8Q6PL24 325 aaPredicted RBP11.77□□□□□ -0.53
TMEM260-213ENST00000556929 TBC1D9Q6ZT07 1266 aa11.77□□□□□ -0.53
TMEM260-213ENST00000556929 SLF2Q8IX21 1173 aa11.77□□□□□ -0.53
TMEM260-213ENST00000556929 AGBL3Q8NEM8 1001 aa11.77□□□□□ -0.53
TMEM260-213ENST00000556929 EDC3Q96F86 508 aaKnown RBP11.77□□□□□ -0.53
TMEM260-213ENST00000556929 MAST3O60307 1309 aa11.77□□□□□ -0.53
TMEM260-213ENST00000556929 RFX7Q2KHR2 1363 aa11.77□□□□□ -0.53
TMEM260-213ENST00000556929 ZFYP08048 801 aaPredicted RBP11.76□□□□□ -0.53
TMEM260-213ENST00000556929 RPS12P25398 132 aaKnown RBP11.76□□□□□ -0.53
TMEM260-213ENST00000556929 GSTO1P78417 241 aa11.76□□□□□ -0.53
TMEM260-213ENST00000556929 CASC1Q6TDU7 716 aa11.76□□□□□ -0.53
TMEM260-213ENST00000556929 DZIP1Q86YF9 867 aaKnown RBP11.76□□□□□ -0.53
TMEM260-213ENST00000556929 GPC2Q8N158 579 aa11.76□□□□□ -0.53
TMEM260-213ENST00000556929 PIH1D3Q9NQM4 214 aaKnown RBP11.76□□□□□ -0.53
TMEM260-213ENST00000556929 HDAC9Q9UKV0 1011 aa11.76□□□□□ -0.53
TMEM260-213ENST00000556929 GJA3Q9Y6H8 435 aa11.76□□□□□ -0.53
TMEM260-213ENST00000556929 LDHCP07864 332 aa11.75□□□□□ -0.53
TMEM260-213ENST00000556929 PRDX5P30044 214 aa11.75□□□□□ -0.53
TMEM260-213ENST00000556929 MMP14P50281 582 aa11.75□□□□□ -0.53
TMEM260-213ENST00000556929 SLC9C2Q5TAH2 1124 aa11.75□□□□□ -0.53
TMEM260-213ENST00000556929 NAA16Q6N069 864 aaPredicted RBP11.75□□□□□ -0.53
TMEM260-213ENST00000556929 CERS5Q8N5B7 392 aa11.75□□□□□ -0.53
TMEM260-213ENST00000556929 TTF2Q9UNY4 1162 aaKnown RBP11.75□□□□□ -0.53
TMEM260-213ENST00000556929 ECM29Q5VYK3 1845 aa11.74□□□□□ -0.53
TMEM260-213ENST00000556929 F8W031 263 aaPredicted RBP11.74□□□□□ -0.53
TMEM260-213ENST00000556929 RNF113AO15541 343 aaKnown RBP11.74□□□□□ -0.53
TMEM260-213ENST00000556929 CDC45O75419 566 aa11.74□□□□□ -0.53
TMEM260-213ENST00000556929 ADD2P35612 726 aa11.74□□□□□ -0.53
TMEM260-213ENST00000556929 HDLBPQ00341 1268 aaKnown RBP11.74□□□□□ -0.53
TMEM260-213ENST00000556929 MECOMQ03112 1051 aa11.74□□□□□ -0.53
TMEM260-213ENST00000556929 EVX2Q03828 476 aa11.74□□□□□ -0.53
TMEM260-213ENST00000556929 UBE3CQ15386 1083 aa11.74□□□□□ -0.53
TMEM260-213ENST00000556929 KIAA0825Q8IV33 1275 aa11.74□□□□□ -0.53
TMEM260-213ENST00000556929 OGFOD1Q8N543 542 aa11.74□□□□□ -0.53
TMEM260-213ENST00000556929 MAGEB6Q8N7X4 407 aa11.74□□□□□ -0.53
TMEM260-213ENST00000556929 NSUN4Q96CB9 384 aaKnown RBP11.74□□□□□ -0.53
TMEM260-213ENST00000556929 NOL10Q9BSC4 688 aaKnown RBP11.74□□□□□ -0.53
TMEM260-213ENST00000556929 MXD3Q9BW11 206 aa11.74□□□□□ -0.53
TMEM260-213ENST00000556929 MRIQ9BWK5 157 aa11.74□□□□□ -0.53
TMEM260-213ENST00000556929 DIAPH3Q9NSV4 1193 aa11.74□□□□□ -0.53
TMEM260-213ENST00000556929 ZNF541Q9H0D2 1346 aa11.74□□□□□ -0.53
TMEM260-213ENST00000556929 SCN4AP35499 1836 aa11.74□□□□□ -0.53
TMEM260-213ENST00000556929 USP17L8P0C7I0 530 aa11.73□□□□□ -0.53
TMEM260-213ENST00000556929 PDE6AP16499 860 aa11.73□□□□□ -0.53
TMEM260-213ENST00000556929 CYP7A1P22680 504 aa11.73□□□□□ -0.53
TMEM260-213ENST00000556929 GRIK5Q16478 980 aa11.73□□□□□ -0.53
TMEM260-213ENST00000556929 RUFY2Q8WXA3 655 aa11.73□□□□□ -0.53
TMEM260-213ENST00000556929 DPF2Q92785 391 aa11.73□□□□□ -0.53
TMEM260-213ENST00000556929 ZNF532Q9HCE3 1301 aa11.73□□□□□ -0.53
TMEM260-213ENST00000556929 ADAMTSL1Q8N6G6 1762 aa11.72□□□□□ -0.53
TMEM260-213ENST00000556929 GLTPD2A6NH11 291 aa11.72□□□□□ -0.53
TMEM260-213ENST00000556929 BAG3O95817 575 aa11.72□□□□□ -0.53
TMEM260-213ENST00000556929 LMOD1P29536 600 aaPredicted RBP11.72□□□□□ -0.53
TMEM260-213ENST00000556929 GMPSP49915 693 aaPredicted RBP11.72□□□□□ -0.53
TMEM260-213ENST00000556929 RBM5P52756 815 aaKnown RBP eCLIP11.72□□□□□ -0.53
TMEM260-213ENST00000556929 HHIPL2Q6UWX4 724 aa11.72□□□□□ -0.53
TMEM260-213ENST00000556929 CERS3Q8IU89 383 aa11.72□□□□□ -0.53
TMEM260-213ENST00000556929 APPBP2Q92624 585 aa11.72□□□□□ -0.53
TMEM260-213ENST00000556929 TEKT1Q969V4 418 aa11.72□□□□□ -0.53
TMEM260-213ENST00000556929 GMLQ99445 158 aa11.72□□□□□ -0.53
TMEM260-213ENST00000556929 HELLSQ9NRZ9 838 aa11.72□□□□□ -0.53
TMEM260-213ENST00000556929 SERPINA10Q9UK55 444 aa11.72□□□□□ -0.53
TMEM260-213ENST00000556929 GOLGB1Q14789 3259 aaKnown RBP11.72□□□□□ -0.53
TMEM260-213ENST00000556929 MROH7-TTC4A0A0A0MT08 1334 aa11.71□□□□□ -0.53
TMEM260-213ENST00000556929 H7C1D1 291 aa11.71□□□□□ -0.53
TMEM260-213ENST00000556929 EIF5BO60841 1220 aaKnown RBP11.71□□□□□ -0.53
TMEM260-213ENST00000556929 DDNO94850 711 aaPredicted RBP11.71□□□□□ -0.53
TMEM260-213ENST00000556929 CHMLP26374 656 aa11.71□□□□□ -0.53
TMEM260-213ENST00000556929 CRKP46108 304 aa11.71□□□□□ -0.53
TMEM260-213ENST00000556929 SCNN1DP51172 638 aa11.71□□□□□ -0.53
TMEM260-213ENST00000556929 MFAP1P55081 439 aaKnown RBP11.71□□□□□ -0.53
TMEM260-213ENST00000556929 NMIQ13287 307 aaPredicted RBP11.71□□□□□ -0.53
TMEM260-213ENST00000556929 ZMYM1Q5SVZ6 1142 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms