RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 NANOS1Q8WY41 292 aaKnown RBP6.79□□□□□ -1.32
ATXN3-244ENST00000556898 FMNL2Q96PY5 1086 aa6.79□□□□□ -1.32
ATXN3-244ENST00000556898 SMC4Q9NTJ3 1288 aa6.79□□□□□ -1.32
ATXN3-244ENST00000556898 GOLGB1Q14789 3259 aaKnown RBP6.79□□□□□ -1.32
ATXN3-244ENST00000556898 COL24A1Q17RW2 1714 aa6.79□□□□□ -1.32
ATXN3-244ENST00000556898 BTAF1O14981 1849 aa6.78□□□□□ -1.32
ATXN3-244ENST00000556898 LOC102724428A0A0B4J2F2 783 aa6.78□□□□□ -1.32
ATXN3-244ENST00000556898 SLC35F4A4IF30 521 aa6.78□□□□□ -1.32
ATXN3-244ENST00000556898 AP1G2O75843 785 aa6.78□□□□□ -1.32
ATXN3-244ENST00000556898 MMP10P09238 476 aa6.78□□□□□ -1.32
ATXN3-244ENST00000556898 CTSOP43234 321 aaPredicted RBP6.78□□□□□ -1.32
ATXN3-244ENST00000556898 SIK1P57059 783 aa6.78□□□□□ -1.32
ATXN3-244ENST00000556898 ITPK1Q13572 414 aa6.78□□□□□ -1.32
ATXN3-244ENST00000556898 HDGFL1Q5TGJ6 251 aa6.78□□□□□ -1.32
ATXN3-244ENST00000556898 C9orf131Q5VYM1 1079 aa6.78□□□□□ -1.32
ATXN3-244ENST00000556898 ZNF385CQ66K41 422 aaPredicted RBP6.78□□□□□ -1.32
ATXN3-244ENST00000556898 PDXDC2PQ6P474 469 aa6.78□□□□□ -1.32
ATXN3-244ENST00000556898 SMIM5Q71RC9 77 aa6.78□□□□□ -1.32
ATXN3-244ENST00000556898 FRAT1Q92837 279 aaPredicted RBP6.78□□□□□ -1.32
ATXN3-244ENST00000556898 KCTD15Q96SI1 283 aaPredicted RBP6.78□□□□□ -1.32
ATXN3-244ENST00000556898 PHAXQ9H814 394 aaKnown RBP6.78□□□□□ -1.32
ATXN3-244ENST00000556898 CHPF2Q9P2E5 772 aa6.78□□□□□ -1.32
ATXN3-244ENST00000556898 NOB1Q9ULX3 412 aaKnown RBP6.78□□□□□ -1.32
ATXN3-244ENST00000556898 RNF123Q5XPI4 1314 aa6.77□□□□□ -1.32
ATXN3-244ENST00000556898 KDM2BQ8NHM5 1336 aa6.77□□□□□ -1.32
ATXN3-244ENST00000556898 UBR2Q8IWV8 1755 aa6.77□□□□□ -1.33
ATXN3-244ENST00000556898 A1BGP04217 495 aa6.77□□□□□ -1.33
ATXN3-244ENST00000556898 SNRPA1P09661 255 aaKnown RBP6.77□□□□□ -1.33
ATXN3-244ENST00000556898 MYL6BP14649 208 aa6.77□□□□□ -1.33
ATXN3-244ENST00000556898 DPEP1P16444 411 aa6.77□□□□□ -1.33
ATXN3-244ENST00000556898 RASSF7Q02833 373 aa6.77□□□□□ -1.33
ATXN3-244ENST00000556898 MCM6Q14566 821 aa6.77□□□□□ -1.33
ATXN3-244ENST00000556898 TRAPPC3LQ5T215 181 aa6.77□□□□□ -1.33
ATXN3-244ENST00000556898 NBPF10Q6P3W6 841 aaKnown RBP6.77□□□□□ -1.33
ATXN3-244ENST00000556898 VWA5B2Q8N398 1253 aa6.77□□□□□ -1.33
ATXN3-244ENST00000556898 NBPF15Q8N660 670 aa6.77□□□□□ -1.33
ATXN3-244ENST00000556898 LINC00116Q8NCU8 138 aa6.77□□□□□ -1.33
ATXN3-244ENST00000556898 SMC1BQ8NDV3 1235 aa6.77□□□□□ -1.33
ATXN3-244ENST00000556898 PANK1Q8TE04 598 aa6.77□□□□□ -1.33
ATXN3-244ENST00000556898 CLUAP1Q96AJ1 413 aa6.77□□□□□ -1.33
ATXN3-244ENST00000556898 ARHGAP9Q9BRR9 750 aa6.77□□□□□ -1.33
ATXN3-244ENST00000556898 RRAGCQ9HB90 399 aa6.77□□□□□ -1.33
ATXN3-244ENST00000556898 CCDC87Q9NVE4 849 aa6.77□□□□□ -1.33
ATXN3-244ENST00000556898 FKBPLQ9UIM3 349 aa6.77□□□□□ -1.33
ATXN3-244ENST00000556898 QSER1Q2KHR3 1735 aa6.76□□□□□ -1.33
ATXN3-244ENST00000556898 CT47B1P0C2W7 299 aaPredicted RBP6.76□□□□□ -1.33
ATXN3-244ENST00000556898 RLBP1P12271 317 aa6.76□□□□□ -1.33
ATXN3-244ENST00000556898 NR6A1Q15406 480 aa6.76□□□□□ -1.33
ATXN3-244ENST00000556898 ALDH1L2Q3SY69 923 aa6.76□□□□□ -1.33
ATXN3-244ENST00000556898 INTS6LQ5JSJ4 861 aaKnown RBP6.76□□□□□ -1.33
ATXN3-244ENST00000556898 MTMR14Q8NCE2 650 aa6.76□□□□□ -1.33
ATXN3-244ENST00000556898 ZNF428Q96B54 188 aa6.76□□□□□ -1.33
ATXN3-244ENST00000556898 CRBNQ96SW2 442 aa6.76□□□□□ -1.33
ATXN3-244ENST00000556898 INSM2Q96T92 566 aaPredicted RBP6.76□□□□□ -1.33
ATXN3-244ENST00000556898 PGPEP1Q9NXJ5 209 aa6.76□□□□□ -1.33
ATXN3-244ENST00000556898 PIM2Q9P1W9 311 aa6.76□□□□□ -1.33
ATXN3-244ENST00000556898 TJP1Q07157 1748 aa6.76□□□□□ -1.33
ATXN3-244ENST00000556898 ZC3H4Q9UPT8 1303 aaKnown RBP6.76□□□□□ -1.33
ATXN3-244ENST00000556898 F6X3S4 739 aa6.75□□□□□ -1.33
ATXN3-244ENST00000556898 GDF11O95390 407 aa6.75□□□□□ -1.33
ATXN3-244ENST00000556898 HOXB7P09629 217 aa6.75□□□□□ -1.33
ATXN3-244ENST00000556898 CYP19A1P11511 503 aaPredicted RBP6.75□□□□□ -1.33
ATXN3-244ENST00000556898 KCNA3P22001 575 aa6.75□□□□□ -1.33
ATXN3-244ENST00000556898 CANXP27824 592 aaKnown RBP6.75□□□□□ -1.33
ATXN3-244ENST00000556898 RELBQ01201 579 aa6.75□□□□□ -1.33
ATXN3-244ENST00000556898 AIMP1Q12904 312 aaKnown RBP6.75□□□□□ -1.33
ATXN3-244ENST00000556898 DALRD3Q5D0E6 543 aaKnown RBP6.75□□□□□ -1.33
ATXN3-244ENST00000556898 CCDC30Q5VVM6 783 aa6.75□□□□□ -1.33
ATXN3-244ENST00000556898 ZKSCAN2Q63HK3 967 aa6.75□□□□□ -1.33
ATXN3-244ENST00000556898 LRP10Q7Z4F1 713 aa6.75□□□□□ -1.33
ATXN3-244ENST00000556898 TMEM151AQ8N4L1 468 aa6.75□□□□□ -1.33
ATXN3-244ENST00000556898 EXOC6Q8TAG9 804 aa6.75□□□□□ -1.33
ATXN3-244ENST00000556898 ZNF395Q9H8N7 513 aaPredicted RBP6.75□□□□□ -1.33
ATXN3-244ENST00000556898 HMX1Q9NP08 348 aaPredicted RBP6.75□□□□□ -1.33
ATXN3-244ENST00000556898 TMPRSS4Q9NRS4 437 aa6.75□□□□□ -1.33
ATXN3-244ENST00000556898 ZBTB1Q9Y2K1 713 aa6.75□□□□□ -1.33
ATXN3-244ENST00000556898 RTCBQ9Y3I0 505 aaKnown RBP6.75□□□□□ -1.33
ATXN3-244ENST00000556898 ZNF330Q9Y3S2 320 aaPredicted RBP6.75□□□□□ -1.33
ATXN3-244ENST00000556898 PARP3Q9Y6F1 533 aa6.75□□□□□ -1.33
ATXN3-244ENST00000556898 ARHGEF15O94989 841 aa6.74□□□□□ -1.33
ATXN3-244ENST00000556898 HSPA1AP0DMV8 641 aaKnown RBP6.74□□□□□ -1.33
ATXN3-244ENST00000556898 HSPA1BP0DMV9 641 aaKnown RBP6.74□□□□□ -1.33
ATXN3-244ENST00000556898 TRIM27P14373 513 aa6.74□□□□□ -1.33
ATXN3-244ENST00000556898 ITGA6P23229 1130 aa6.74□□□□□ -1.33
ATXN3-244ENST00000556898 RFC4P35249 363 aa6.74□□□□□ -1.33
ATXN3-244ENST00000556898 ADD1P35611 737 aaKnown RBP6.74□□□□□ -1.33
ATXN3-244ENST00000556898 FLIIQ13045 1269 aa6.74□□□□□ -1.33
ATXN3-244ENST00000556898 INTS5Q6P9B9 1019 aaKnown RBP6.74□□□□□ -1.33
ATXN3-244ENST00000556898 TTLL7Q6ZT98 887 aa6.74□□□□□ -1.33
ATXN3-244ENST00000556898 COPS6Q7L5N1 327 aa6.74□□□□□ -1.33
ATXN3-244ENST00000556898 TMEM57Q8N5G2 664 aa6.74□□□□□ -1.33
ATXN3-244ENST00000556898 KDF1Q8NAX2 398 aaPredicted RBP6.74□□□□□ -1.33
ATXN3-244ENST00000556898 EPS8L1Q8TE68 723 aa6.74□□□□□ -1.33
ATXN3-244ENST00000556898 XAGE3Q8WTP9 111 aa6.74□□□□□ -1.33
ATXN3-244ENST00000556898 STK31Q9BXU1 1019 aa6.74□□□□□ -1.33
ATXN3-244ENST00000556898 TRIM34Q9BYJ4 488 aa6.74□□□□□ -1.33
ATXN3-244ENST00000556898 SNRKQ9NRH2 765 aa6.74□□□□□ -1.33
ATXN3-244ENST00000556898 RNF181Q9P0P0 153 aa6.74□□□□□ -1.33
ATXN3-244ENST00000556898 COG6Q9Y2V7 657 aa6.74□□□□□ -1.33
ATXN3-244ENST00000556898 GTF3C3Q9Y5Q9 886 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms