RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 MYO1BO43795 1136 aa28.15■■■□□ 2.1
TDP1-216ENST00000556867 GORABQ5T7V8 394 aa28.15■■■□□ 2.1
TDP1-216ENST00000556867 MRIQ9BWK5 157 aa28.15■■■□□ 2.1
TDP1-216ENST00000556867 ARID4AP29374 1257 aaPredicted RBP28.14■■■□□ 2.1
TDP1-216ENST00000556867 JMYQ8N9B5 988 aa28.14■■■□□ 2.1
TDP1-216ENST00000556867 SCAF8Q9UPN6 1271 aaKnown RBP28.14■■■□□ 2.1
TDP1-216ENST00000556867 AOX1Q06278 1338 aa28.14■■■□□ 2.09
TDP1-216ENST00000556867 DEFB115Q30KQ5 88 aa28.13■■■□□ 2.09
TDP1-216ENST00000556867 SAPCD2Q86UD0 394 aa28.13■■■□□ 2.09
TDP1-216ENST00000556867 TEKT1Q969V4 418 aa28.13■■■□□ 2.09
TDP1-216ENST00000556867 PRDX5P30044 214 aa28.12■■■□□ 2.09
TDP1-216ENST00000556867 ZGPATQ8N5A5 531 aaKnown RBP28.12■■■□□ 2.09
TDP1-216ENST00000556867 DBNDD2Q9BQY9 259 aa28.12■■■□□ 2.09
TDP1-216ENST00000556867 GBA2Q9HCG7 927 aaPredicted RBP28.12■■■□□ 2.09
TDP1-216ENST00000556867 CLRN2A0PK11 232 aa28.11■■■□□ 2.09
TDP1-216ENST00000556867 UQCRFS1P1P0C7P4 283 aa28.11■■■□□ 2.09
TDP1-216ENST00000556867 SPDYE2Q495Y8 402 aa28.11■■■□□ 2.09
TDP1-216ENST00000556867 ZDHHC15Q96MV8 337 aa28.11■■■□□ 2.09
TDP1-216ENST00000556867 PAPPA2Q9BXP8 1791 aa28.1■■■□□ 2.09
TDP1-216ENST00000556867 LDHBP07195 334 aaKnown RBP28.1■■■□□ 2.09
TDP1-216ENST00000556867 HHIPL2Q6UWX4 724 aa28.1■■■□□ 2.09
TDP1-216ENST00000556867 EAF2Q96CJ1 260 aaPredicted RBP28.1■■■□□ 2.09
TDP1-216ENST00000556867 HHIPL1Q96JK4 782 aa28.1■■■□□ 2.09
TDP1-216ENST00000556867 HMG20BQ9P0W2 317 aa28.1■■■□□ 2.09
TDP1-216ENST00000556867 C2orf69Q8N8R5 385 aa28.09■■■□□ 2.09
TDP1-216ENST00000556867 SPATA5Q8NB90 893 aa28.09■■■□□ 2.09
TDP1-216ENST00000556867 RHPN1Q8TCX5 695 aa28.09■■■□□ 2.09
TDP1-216ENST00000556867 TDRD3Q9H7E2 651 aaKnown RBP28.09■■■□□ 2.09
TDP1-216ENST00000556867 ZNF70Q9UC06 446 aaPredicted RBP28.09■■■□□ 2.09
TDP1-216ENST00000556867 DBNLQ9UJU6 430 aaKnown RBP28.09■■■□□ 2.09
TDP1-216ENST00000556867 PPP2R3BQ9Y5P8 575 aa28.09■■■□□ 2.09
TDP1-216ENST00000556867 AKAP11Q9UKA4 1901 aa28.09■■■□□ 2.09
TDP1-216ENST00000556867 VEGFBP49765 207 aa28.08■■■□□ 2.09
TDP1-216ENST00000556867 CCDC158Q5M9N0 1113 aa28.08■■■□□ 2.09
TDP1-216ENST00000556867 KIF1BPQ96EK5 621 aa28.08■■■□□ 2.09
TDP1-216ENST00000556867 ZNF512BQ96KM6 892 aaPredicted RBP28.08■■■□□ 2.09
TDP1-216ENST00000556867 DEFB129Q9H1M3 183 aa28.08■■■□□ 2.09
TDP1-216ENST00000556867 VEZTQ9HBM0 779 aa28.08■■■□□ 2.09
TDP1-216ENST00000556867 RAB11FIP3O75154 756 aa28.07■■■□□ 2.08
TDP1-216ENST00000556867 MCAMP43121 646 aa28.07■■■□□ 2.08
TDP1-216ENST00000556867 FKBP1BP68106 108 aa28.07■■■□□ 2.08
TDP1-216ENST00000556867 TTC39AQ5SRH9 613 aa28.07■■■□□ 2.08
TDP1-216ENST00000556867 PRAMEF18Q5VWM3 479 aa28.07■■■□□ 2.08
TDP1-216ENST00000556867 TLR7Q9NYK1 1049 aaKnown RBP28.07■■■□□ 2.08
TDP1-216ENST00000556867 MYH2Q9UKX2 1941 aa28.06■■■□□ 2.08
TDP1-216ENST00000556867 SPTY2D1Q68D10 685 aaPredicted RBP28.06■■■□□ 2.08
TDP1-216ENST00000556867 APOBEC3HQ6NTF7 200 aaKnown RBP28.06■■■□□ 2.08
TDP1-216ENST00000556867 PI16Q6UXB8 463 aa28.06■■■□□ 2.08
TDP1-216ENST00000556867 CCDC8Q9H0W5 538 aaPredicted RBP28.06■■■□□ 2.08
TDP1-216ENST00000556867 THSD7BQ9C0I4 1608 aa28.06■■■□□ 2.08
TDP1-216ENST00000556867 ECE1P42892 770 aa28.05■■■□□ 2.08
TDP1-216ENST00000556867 HUNKP57058 714 aa28.05■■■□□ 2.08
TDP1-216ENST00000556867 TNFAIP1Q13829 316 aa28.05■■■□□ 2.08
TDP1-216ENST00000556867 DIXDC1Q155Q3 683 aa28.05■■■□□ 2.08
TDP1-216ENST00000556867 AACSQ86V21 672 aa28.05■■■□□ 2.08
TDP1-216ENST00000556867 IL1RAPL2Q9NP60 686 aa28.05■■■□□ 2.08
TDP1-216ENST00000556867 ABCF2Q9UG63 623 aa28.05■■■□□ 2.08
TDP1-216ENST00000556867 DAGLAQ9Y4D2 1042 aa28.05■■■□□ 2.08
TDP1-216ENST00000556867 PCNTO95613 3336 aa28.04■■■□□ 2.08
TDP1-216ENST00000556867 WDR33Q9C0J8 1336 aaKnown RBP28.04■■■□□ 2.08
TDP1-216ENST00000556867 NF2P35240 595 aa28.04■■■□□ 2.08
TDP1-216ENST00000556867 CAPNS2Q96L46 248 aa28.04■■■□□ 2.08
TDP1-216ENST00000556867 CRBNQ96SW2 442 aa28.04■■■□□ 2.08
TDP1-216ENST00000556867 CYP4F22Q6NT55 531 aa28.03■■■□□ 2.08
TDP1-216ENST00000556867 PAXIP1Q6ZW49 1069 aaPredicted RBP28.03■■■□□ 2.08
TDP1-216ENST00000556867 DZIP1Q86YF9 867 aaKnown RBP28.03■■■□□ 2.08
TDP1-216ENST00000556867 CLASRPQ8N2M8 674 aaKnown RBP28.03■■■□□ 2.08
TDP1-216ENST00000556867 APBB1O00213 710 aa28.02■■■□□ 2.08
TDP1-216ENST00000556867 RASA3Q14644 834 aa28.02■■■□□ 2.08
TDP1-216ENST00000556867 GAKO14976 1311 aa28.01■■■□□ 2.07
TDP1-216ENST00000556867 ERICH6Q7L0X2 663 aa28.01■■■□□ 2.07
TDP1-216ENST00000556867 TMOD2Q9NZR1 351 aa28.01■■■□□ 2.07
TDP1-216ENST00000556867 SSC5DA1L4H1 1573 aa28.01■■■□□ 2.07
TDP1-216ENST00000556867 FKBP1CQ5VVH2 108 aa28■■■□□ 2.07
TDP1-216ENST00000556867 SLF2Q8IX21 1173 aa28■■■□□ 2.07
TDP1-216ENST00000556867 PCDHB15Q9Y5E8 787 aa28■■■□□ 2.07
TDP1-216ENST00000556867 MAST2Q6P0Q8 1798 aa28■■■□□ 2.07
TDP1-216ENST00000556867 TCP10L2B9ZVM9 353 aa27.99■■■□□ 2.07
TDP1-216ENST00000556867 TNNI2P48788 182 aa27.99■■■□□ 2.07
TDP1-216ENST00000556867 TBC1D9Q6ZT07 1266 aa27.99■■■□□ 2.07
TDP1-216ENST00000556867 FAM163AQ96GL9 167 aaPredicted RBP27.99■■■□□ 2.07
TDP1-216ENST00000556867 SNRKQ9NRH2 765 aa27.99■■■□□ 2.07
TDP1-216ENST00000556867 MECOMQ03112 1051 aa27.98■■■□□ 2.07
TDP1-216ENST00000556867 SUPT20HL1Q3ZLR7 823 aa27.98■■■□□ 2.07
TDP1-216ENST00000556867 RGMBQ6NW40 437 aa27.98■■■□□ 2.07
TDP1-216ENST00000556867 DCTPP1Q9H773 170 aa27.98■■■□□ 2.07
TDP1-216ENST00000556867 CACNB3P54284 484 aa27.97■■■□□ 2.07
TDP1-216ENST00000556867 CDC42EP5Q6NZY7 148 aa27.97■■■□□ 2.07
TDP1-216ENST00000556867 MOB2Q70IA6 237 aa27.97■■■□□ 2.07
TDP1-216ENST00000556867 FAM83AQ86UY5 434 aa27.97■■■□□ 2.07
TDP1-216ENST00000556867 ZNF384Q8TF68 577 aa27.97■■■□□ 2.07
TDP1-216ENST00000556867 LRRCC1Q9C099 1032 aa27.97■■■□□ 2.07
TDP1-216ENST00000556867 MROH7-TTC4A0A0A0MT08 1334 aa27.96■■■□□ 2.07
TDP1-216ENST00000556867 MYO5AQ9Y4I1 1855 aaKnown RBP27.96■■■□□ 2.07
TDP1-216ENST00000556867 CYP2E1P05181 493 aaPredicted RBP27.96■■■□□ 2.07
TDP1-216ENST00000556867 IFIT2P09913 472 aaKnown RBP27.96■■■□□ 2.07
TDP1-216ENST00000556867 ZAP70P43403 619 aa27.96■■■□□ 2.07
TDP1-216ENST00000556867 GRM1Q13255 1194 aa27.96■■■□□ 2.07
TDP1-216ENST00000556867 TTLL12Q14166 644 aaPredicted RBP27.96■■■□□ 2.07
TDP1-216ENST00000556867 NBPF12Q5TAG4 269 aaPredicted RBP27.96■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms