RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 POLR3DP05423 398 aaPredicted RBP7.89□□□□□ -1.15
PRPF39-210ENST00000556718 CPSF6Q16630 551 aaKnown RBP eCLIP7.89□□□□□ -1.15
PRPF39-210ENST00000556718 OGFOD2Q6N063 350 aa7.89□□□□□ -1.15
PRPF39-210ENST00000556718 VSIG10LQ86VR7 867 aa7.89□□□□□ -1.15
PRPF39-210ENST00000556718 TP53INP2Q8IXH6 220 aa7.89□□□□□ -1.15
PRPF39-210ENST00000556718 ADH5P11766 374 aa7.88□□□□□ -1.15
PRPF39-210ENST00000556718 LCE1DQ5T752 114 aa7.88□□□□□ -1.15
PRPF39-210ENST00000556718 C1orf115Q9H7X2 142 aa7.88□□□□□ -1.15
PRPF39-210ENST00000556718 ACTL7BQ9Y614 415 aa7.88□□□□□ -1.15
PRPF39-210ENST00000556718 FZD6O60353 706 aa7.87□□□□□ -1.15
PRPF39-210ENST00000556718 NFICP08651 508 aa7.87□□□□□ -1.15
PRPF39-210ENST00000556718 AAMPQ13685 434 aa7.87□□□□□ -1.15
PRPF39-210ENST00000556718 ZNF423Q2M1K9 1284 aa7.87□□□□□ -1.15
PRPF39-210ENST00000556718 ALKBH2Q6NS38 261 aa7.87□□□□□ -1.15
PRPF39-210ENST00000556718 FBXL18Q96ME1 805 aa7.87□□□□□ -1.15
PRPF39-210ENST00000556718 METTL22Q9BUU2 404 aaPredicted RBP7.87□□□□□ -1.15
PRPF39-210ENST00000556718 AMOTL2Q9Y2J4 779 aa7.87□□□□□ -1.15
PRPF39-210ENST00000556718 NPR3P17342 541 aa7.86□□□□□ -1.15
PRPF39-210ENST00000556718 SSFA2P28290 1259 aa7.86□□□□□ -1.15
PRPF39-210ENST00000556718 CCDC97Q96F63 343 aaPredicted RBP7.86□□□□□ -1.15
PRPF39-210ENST00000556718 ZFYVE28Q9HCC9 887 aa7.86□□□□□ -1.15
PRPF39-210ENST00000556718 CCDC87Q9NVE4 849 aa7.86□□□□□ -1.15
PRPF39-210ENST00000556718 BSDC1Q9NW68 430 aaPredicted RBP7.86□□□□□ -1.15
PRPF39-210ENST00000556718 ZC3H7BQ9UGR2 993 aaKnown RBP7.86□□□□□ -1.15
PRPF39-210ENST00000556718 ARID1BQ8NFD5 2236 aaPredicted RBP7.85□□□□□ -1.15
PRPF39-210ENST00000556718 TMEM88BA6NKF7 163 aa7.85□□□□□ -1.15
PRPF39-210ENST00000556718 ECEL1O95672 775 aa7.85□□□□□ -1.15
PRPF39-210ENST00000556718 ITGB5P18084 799 aa7.85□□□□□ -1.15
PRPF39-210ENST00000556718 RAB6AP20340 208 aa7.85□□□□□ -1.15
PRPF39-210ENST00000556718 MAOBP27338 520 aa7.85□□□□□ -1.15
PRPF39-210ENST00000556718 PCDH1Q08174 1060 aa7.85□□□□□ -1.15
PRPF39-210ENST00000556718 SPRED3Q2MJR0 410 aa7.85□□□□□ -1.15
PRPF39-210ENST00000556718 FLCNQ8NFG4 579 aa7.85□□□□□ -1.15
PRPF39-210ENST00000556718 LRRC4CQ9HCJ2 640 aa7.85□□□□□ -1.15
PRPF39-210ENST00000556718 PAK6Q9NQU5 681 aaPredicted RBP7.85□□□□□ -1.15
PRPF39-210ENST00000556718 A0A096LPE4 126 aa7.84□□□□□ -1.15
PRPF39-210ENST00000556718 A0A1W2PPZ6 126 aa7.84□□□□□ -1.15
PRPF39-210ENST00000556718 GRIA4P48058 902 aa7.84□□□□□ -1.15
PRPF39-210ENST00000556718 JAG1P78504 1218 aa7.84□□□□□ -1.15
PRPF39-210ENST00000556718 ZNF765Q7L2R6 523 aa7.84□□□□□ -1.15
PRPF39-210ENST00000556718 YIPF2Q9BWQ6 316 aa7.84□□□□□ -1.15
PRPF39-210ENST00000556718 KRTAP4-7Q9BYR0 210 aa7.84□□□□□ -1.15
PRPF39-210ENST00000556718 EHHADHQ08426 723 aa7.83□□□□□ -1.16
PRPF39-210ENST00000556718 AKAP4Q5JQC9 854 aa7.83□□□□□ -1.16
PRPF39-210ENST00000556718 DYMQ7RTS9 669 aa7.83□□□□□ -1.16
PRPF39-210ENST00000556718 GJD3Q8N144 294 aa7.83□□□□□ -1.16
PRPF39-210ENST00000556718 CCDC82Q8N4S0 544 aa7.83□□□□□ -1.16
PRPF39-210ENST00000556718 TCF12Q99081 682 aa7.83□□□□□ -1.16
PRPF39-210ENST00000556718 CLEC4MQ9H2X3 399 aaPredicted RBP7.83□□□□□ -1.16
PRPF39-210ENST00000556718 SEMA6CQ9H3T2 930 aa7.83□□□□□ -1.16
PRPF39-210ENST00000556718 ANO2Q9NQ90 1003 aa7.83□□□□□ -1.16
PRPF39-210ENST00000556718 FAM105AQ9NUU6 356 aa7.83□□□□□ -1.16
PRPF39-210ENST00000556718 A0A1W2PP55 124 aa7.82□□□□□ -1.16
PRPF39-210ENST00000556718 DYNC1LI2O43237 492 aaPredicted RBP7.82□□□□□ -1.16
PRPF39-210ENST00000556718 FAM13AO94988 1023 aa7.82□□□□□ -1.16
PRPF39-210ENST00000556718 C8AP07357 584 aa7.82□□□□□ -1.16
PRPF39-210ENST00000556718 POU4F3Q15319 338 aa7.82□□□□□ -1.16
PRPF39-210ENST00000556718 CCNJLQ8IV13 435 aa7.82□□□□□ -1.16
PRPF39-210ENST00000556718 ASIC4Q96FT7 647 aa7.82□□□□□ -1.16
PRPF39-210ENST00000556718 TRIM56Q9BRZ2 755 aaKnown RBP7.82□□□□□ -1.16
PRPF39-210ENST00000556718 ACSS3Q9H6R3 686 aa7.82□□□□□ -1.16
PRPF39-210ENST00000556718 SERPINA10Q9UK55 444 aa7.82□□□□□ -1.16
PRPF39-210ENST00000556718 USP5P45974 858 aa7.81□□□□□ -1.16
PRPF39-210ENST00000556718 MAP7Q14244 749 aa7.81□□□□□ -1.16
PRPF39-210ENST00000556718 DUSP27Q5VZP5 1158 aa7.81□□□□□ -1.16
PRPF39-210ENST00000556718 PHLDB3Q6NSJ2 640 aa7.81□□□□□ -1.16
PRPF39-210ENST00000556718 LIN7BQ9HAP6 207 aa7.81□□□□□ -1.16
PRPF39-210ENST00000556718 AP4E1Q9UPM8 1137 aa7.81□□□□□ -1.16
PRPF39-210ENST00000556718 CARNS1A5YM72 827 aa7.8□□□□□ -1.16
PRPF39-210ENST00000556718 SEZ6L2Q6UXD5 910 aa7.8□□□□□ -1.16
PRPF39-210ENST00000556718 ZNF574Q6ZN55 896 aaPredicted RBP7.8□□□□□ -1.16
PRPF39-210ENST00000556718 WFDC3Q8IUB2 231 aa7.8□□□□□ -1.16
PRPF39-210ENST00000556718 POU5F2Q8N7G0 328 aa7.8□□□□□ -1.16
PRPF39-210ENST00000556718 LGR6Q9HBX8 967 aa7.8□□□□□ -1.16
PRPF39-210ENST00000556718 C1GALT1Q9NS00 363 aa7.8□□□□□ -1.16
PRPF39-210ENST00000556718 CYP11A1P05108 521 aa7.79□□□□□ -1.16
PRPF39-210ENST00000556718 ZNF211Q13398 564 aaPredicted RBP7.79□□□□□ -1.16
PRPF39-210ENST00000556718 USPL1Q5W0Q7 1092 aa7.79□□□□□ -1.16
PRPF39-210ENST00000556718 GALNT12Q8IXK2 581 aa7.79□□□□□ -1.16
PRPF39-210ENST00000556718 AGBL5Q8NDL9 886 aa7.79□□□□□ -1.16
PRPF39-210ENST00000556718 RAD18Q9NS91 495 aa7.79□□□□□ -1.16
PRPF39-210ENST00000556718 PODXL2Q9NZ53 605 aa7.79□□□□□ -1.16
PRPF39-210ENST00000556718 PDIA4P13667 645 aaKnown RBP7.78□□□□□ -1.16
PRPF39-210ENST00000556718 JUNBP17275 347 aaPredicted RBP7.78□□□□□ -1.16
PRPF39-210ENST00000556718 ASPAP45381 313 aa7.78□□□□□ -1.16
PRPF39-210ENST00000556718 SPRED2Q7Z698 418 aa7.78□□□□□ -1.16
PRPF39-210ENST00000556718 BCL7CQ8WUZ0 217 aaPredicted RBP7.78□□□□□ -1.16
PRPF39-210ENST00000556718 GSX1Q9H4S2 264 aaPredicted RBP7.78□□□□□ -1.16
PRPF39-210ENST00000556718 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.77□□□□□ -1.17
PRPF39-210ENST00000556718 PAPLNO95428 1278 aa7.77□□□□□ -1.17
PRPF39-210ENST00000556718 ABL1P00519 1130 aa7.77□□□□□ -1.17
PRPF39-210ENST00000556718 FKBP4Q02790 459 aaKnown RBP eCLIP7.77□□□□□ -1.17
PRPF39-210ENST00000556718 PPP1R9AQ9ULJ8 1098 aa7.77□□□□□ -1.17
PRPF39-210ENST00000556718 DAGLAQ9Y4D2 1042 aa7.77□□□□□ -1.17
PRPF39-210ENST00000556718 EIF4EBP3O60516 100 aaPredicted RBP7.76□□□□□ -1.17
PRPF39-210ENST00000556718 CYP27A1Q02318 531 aa7.76□□□□□ -1.17
PRPF39-210ENST00000556718 SF3B2Q13435 895 aaKnown RBP7.76□□□□□ -1.17
PRPF39-210ENST00000556718 CORO1BQ9BR76 489 aa7.76□□□□□ -1.17
PRPF39-210ENST00000556718 WDR18Q9BV38 432 aa7.76□□□□□ -1.17
PRPF39-210ENST00000556718 ZNF576Q9H609 170 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms