RNA–Protein interactions for RNA: ENST00000556682.5

XRCC3-216, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-216ENST00000556682 UBE2Q2LH0YL09 131 aa13.4□□□□□ -0.26
XRCC3-216ENST00000556682 CRKP46108 304 aa13.4□□□□□ -0.26
XRCC3-216ENST00000556682 MTX1Q13505 466 aa13.4□□□□□ -0.26
XRCC3-216ENST00000556682 FTSJ3Q8IY81 847 aaKnown RBP13.4□□□□□ -0.26
XRCC3-216ENST00000556682 DZIP1LQ8IYY4 767 aaKnown RBP13.4□□□□□ -0.26
XRCC3-216ENST00000556682 TEKT1Q969V4 418 aa13.4□□□□□ -0.26
XRCC3-216ENST00000556682 MRIQ9BWK5 157 aa13.4□□□□□ -0.26
XRCC3-216ENST00000556682 AKAP2Q9Y2D5 859 aa13.4□□□□□ -0.26
XRCC3-216ENST00000556682 TNNI2P48788 182 aa13.39□□□□□ -0.27
XRCC3-216ENST00000556682 ZIC5Q96T25 663 aa13.39□□□□□ -0.27
XRCC3-216ENST00000556682 PA2G4Q9UQ80 394 aaKnown RBP13.39□□□□□ -0.27
XRCC3-216ENST00000556682 PCDHAC2Q9Y5I4 1007 aa13.39□□□□□ -0.27
XRCC3-216ENST00000556682 UNCXA6NJT0 531 aa13.38□□□□□ -0.27
XRCC3-216ENST00000556682 PRKG1Q13976 671 aa13.38□□□□□ -0.27
XRCC3-216ENST00000556682 RASA3Q14644 834 aa13.38□□□□□ -0.27
XRCC3-216ENST00000556682 SPDYE2Q495Y8 402 aa13.38□□□□□ -0.27
XRCC3-216ENST00000556682 MOB2Q70IA6 237 aa13.38□□□□□ -0.27
XRCC3-216ENST00000556682 RASAL3Q86YV0 1011 aa13.38□□□□□ -0.27
XRCC3-216ENST00000556682 TMEM57Q8N5G2 664 aa13.38□□□□□ -0.27
XRCC3-216ENST00000556682 TDRD3Q9H7E2 651 aaKnown RBP13.38□□□□□ -0.27
XRCC3-216ENST00000556682 SAGE1Q9NXZ1 904 aa13.38□□□□□ -0.27
XRCC3-216ENST00000556682 TMOD2Q9NZR1 351 aa13.38□□□□□ -0.27
XRCC3-216ENST00000556682 ZNF70Q9UC06 446 aaPredicted RBP13.38□□□□□ -0.27
XRCC3-216ENST00000556682 DENND2AQ9ULE3 1009 aa13.38□□□□□ -0.27
XRCC3-216ENST00000556682 ANGEL1Q9UNK9 670 aaKnown RBP13.38□□□□□ -0.27
XRCC3-216ENST00000556682 THSD7BQ9C0I4 1608 aa13.38□□□□□ -0.27
XRCC3-216ENST00000556682 A0A1B0GUL6 1792 aa13.37□□□□□ -0.27
XRCC3-216ENST00000556682 PAPPA2Q9BXP8 1791 aa13.37□□□□□ -0.27
XRCC3-216ENST00000556682 SEMA3EO15041 775 aa13.37□□□□□ -0.27
XRCC3-216ENST00000556682 IREB2P48200 963 aaKnown RBP13.37□□□□□ -0.27
XRCC3-216ENST00000556682 G3BP1Q13283 466 aaKnown RBP eCLIP13.37□□□□□ -0.27
XRCC3-216ENST00000556682 HHIPL2Q6UWX4 724 aa13.37□□□□□ -0.27
XRCC3-216ENST00000556682 SLC10A4Q96EP9 437 aa13.37□□□□□ -0.27
XRCC3-216ENST00000556682 CSRNP1Q96S65 589 aa13.37□□□□□ -0.27
XRCC3-216ENST00000556682 TSKSQ9UJT2 592 aa13.37□□□□□ -0.27
XRCC3-216ENST00000556682 MS4A1P11836 297 aa13.36□□□□□ -0.27
XRCC3-216ENST00000556682 MAP3K11Q16584 847 aa13.36□□□□□ -0.27
XRCC3-216ENST00000556682 LDLRAD1Q5T700 205 aa13.36□□□□□ -0.27
XRCC3-216ENST00000556682 ZGPATQ8N5A5 531 aaKnown RBP13.36□□□□□ -0.27
XRCC3-216ENST00000556682 ZDHHC15Q96MV8 337 aa13.36□□□□□ -0.27
XRCC3-216ENST00000556682 RNF186Q9NXI6 227 aa13.36□□□□□ -0.27
XRCC3-216ENST00000556682 TNNQ9UQP3 1299 aa13.36□□□□□ -0.27
XRCC3-216ENST00000556682 ZNF646O15015 1829 aaPredicted RBP13.36□□□□□ -0.27
XRCC3-216ENST00000556682 TCP10L2B9ZVM9 353 aa13.35□□□□□ -0.27
XRCC3-216ENST00000556682 TRPA1O75762 1119 aa13.35□□□□□ -0.27
XRCC3-216ENST00000556682 TIMM10P62072 90 aa13.35□□□□□ -0.27
XRCC3-216ENST00000556682 SREBF2Q12772 1141 aa13.35□□□□□ -0.27
XRCC3-216ENST00000556682 MVPQ14764 893 aaKnown RBP13.35□□□□□ -0.27
XRCC3-216ENST00000556682 GRIK5Q16478 980 aa13.35□□□□□ -0.27
XRCC3-216ENST00000556682 NBPF12Q5TAG4 269 aaPredicted RBP13.35□□□□□ -0.27
XRCC3-216ENST00000556682 ITPRIPQ8IWB1 547 aa13.35□□□□□ -0.27
XRCC3-216ENST00000556682 A0A1B0GUL7 405 aa13.34□□□□□ -0.27
XRCC3-216ENST00000556682 CAPN15O75808 1086 aa13.34□□□□□ -0.27
XRCC3-216ENST00000556682 LDHBP07195 334 aaKnown RBP13.34□□□□□ -0.27
XRCC3-216ENST00000556682 PHKA1P46020 1223 aa13.34□□□□□ -0.27
XRCC3-216ENST00000556682 TFCP2Q12800 502 aa13.34□□□□□ -0.27
XRCC3-216ENST00000556682 GORABQ5T7V8 394 aa13.34□□□□□ -0.27
XRCC3-216ENST00000556682 FKBP1CQ5VVH2 108 aa13.34□□□□□ -0.27
XRCC3-216ENST00000556682 CCDC102BQ68D86 513 aa13.34□□□□□ -0.27
XRCC3-216ENST00000556682 HOOK2Q96ED9 719 aa13.34□□□□□ -0.27
XRCC3-216ENST00000556682 NEUROD6Q96NK8 337 aa13.34□□□□□ -0.27
XRCC3-216ENST00000556682 PNMA6EA0A0J9YXQ4 647 aa13.33□□□□□ -0.28
XRCC3-216ENST00000556682 INHBEP58166 350 aa13.33□□□□□ -0.28
XRCC3-216ENST00000556682 ATP8B2P98198 1209 aa13.33□□□□□ -0.28
XRCC3-216ENST00000556682 OS9Q13438 667 aaPredicted RBP13.33□□□□□ -0.28
XRCC3-216ENST00000556682 SPTY2D1Q68D10 685 aaPredicted RBP13.33□□□□□ -0.28
XRCC3-216ENST00000556682 APOBEC3HQ6NTF7 200 aaKnown RBP13.33□□□□□ -0.28
XRCC3-216ENST00000556682 FAM83AQ86UY5 434 aa13.33□□□□□ -0.28
XRCC3-216ENST00000556682 SLF2Q8IX21 1173 aa13.33□□□□□ -0.28
XRCC3-216ENST00000556682 ANKRD13AQ8IZ07 590 aa13.33□□□□□ -0.28
XRCC3-216ENST00000556682 XAGE2Q96GT9 111 aa13.33□□□□□ -0.28
XRCC3-216ENST00000556682 AOX1Q06278 1338 aa13.33□□□□□ -0.28
XRCC3-216ENST00000556682 SALL1Q9NSC2 1324 aa13.33□□□□□ -0.28
XRCC3-216ENST00000556682 ZBTB7BO15156 539 aaPredicted RBP13.32□□□□□ -0.28
XRCC3-216ENST00000556682 USP2O75604 605 aaPredicted RBP13.32□□□□□ -0.28
XRCC3-216ENST00000556682 ZBTB48P10074 688 aaPredicted RBP13.32□□□□□ -0.28
XRCC3-216ENST00000556682 ADORA1P30542 326 aa13.32□□□□□ -0.28
XRCC3-216ENST00000556682 TM4SF4P48230 202 aa13.32□□□□□ -0.28
XRCC3-216ENST00000556682 MKRN3Q13064 507 aaKnown RBP13.32□□□□□ -0.28
XRCC3-216ENST00000556682 SPRYD7Q5W111 196 aa13.32□□□□□ -0.28
XRCC3-216ENST00000556682 TMEM39BQ9GZU3 492 aa13.32□□□□□ -0.28
XRCC3-216ENST00000556682 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.32□□□□□ -0.28
XRCC3-216ENST00000556682 FZD1Q9UP38 647 aa13.32□□□□□ -0.28
XRCC3-216ENST00000556682 PDS5AQ29RF7 1337 aaKnown RBP13.32□□□□□ -0.28
XRCC3-216ENST00000556682 MANSC4A6NHS7 340 aaPredicted RBP13.31□□□□□ -0.28
XRCC3-216ENST00000556682 SURF6O75683 361 aaKnown RBP13.31□□□□□ -0.28
XRCC3-216ENST00000556682 ALDH1A1P00352 501 aa13.31□□□□□ -0.28
XRCC3-216ENST00000556682 PRDX5P30044 214 aa13.31□□□□□ -0.28
XRCC3-216ENST00000556682 POLA2Q14181 598 aa13.31□□□□□ -0.28
XRCC3-216ENST00000556682 SSH3Q8TE77 659 aa13.31□□□□□ -0.28
XRCC3-216ENST00000556682 RLBP1P12271 317 aa13.3□□□□□ -0.28
XRCC3-216ENST00000556682 CACNB3P54284 484 aa13.3□□□□□ -0.28
XRCC3-216ENST00000556682 MAP3K9P80192 1104 aa13.3□□□□□ -0.28
XRCC3-216ENST00000556682 RASGRF1Q13972 1273 aa13.3□□□□□ -0.28
XRCC3-216ENST00000556682 DIXDC1Q155Q3 683 aa13.3□□□□□ -0.28
XRCC3-216ENST00000556682 OTUD7BQ6GQQ9 843 aa13.3□□□□□ -0.28
XRCC3-216ENST00000556682 DZIP1Q86YF9 867 aaKnown RBP13.3□□□□□ -0.28
XRCC3-216ENST00000556682 WNK4Q96J92 1243 aa13.3□□□□□ -0.28
XRCC3-216ENST00000556682 TEPSINQ96N21 525 aa13.3□□□□□ -0.28
XRCC3-216ENST00000556682 CHMP4BQ9H444 224 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms