RNA–Protein interactions for RNA: ENST00000556516.1

PCNX1-212, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-212ENST00000556516 PCNX4Q63HM2 1172 aa7.59□□□□□ -1.19
PCNX1-212ENST00000556516 METTL16Q86W50 562 aaKnown RBP7.59□□□□□ -1.19
PCNX1-212ENST00000556516 SULF2Q8IWU5 870 aa7.59□□□□□ -1.19
PCNX1-212ENST00000556516 CACTIN-AS1Q8N1I8 211 aa7.59□□□□□ -1.19
PCNX1-212ENST00000556516 ITGAEP38570 1179 aa7.58□□□□□ -1.2
PCNX1-212ENST00000556516 RAC1P63000 192 aa7.58□□□□□ -1.2
PCNX1-212ENST00000556516 GRIN3AQ8TCU5 1115 aa7.58□□□□□ -1.2
PCNX1-212ENST00000556516 RNF34Q969K3 372 aa7.58□□□□□ -1.2
PCNX1-212ENST00000556516 CEP44Q9C0F1 390 aa7.58□□□□□ -1.2
PCNX1-212ENST00000556516 CBX8Q9HC52 389 aa7.58□□□□□ -1.2
PCNX1-212ENST00000556516 IGSF5Q9NSI5 407 aa7.58□□□□□ -1.2
PCNX1-212ENST00000556516 KBTBD4Q9NVX7 518 aa7.58□□□□□ -1.2
PCNX1-212ENST00000556516 MINDY4BA8MYZ0 360 aa7.57□□□□□ -1.2
PCNX1-212ENST00000556516 DLGAP3O95886 979 aa7.57□□□□□ -1.2
PCNX1-212ENST00000556516 MAOBP27338 520 aa7.57□□□□□ -1.2
PCNX1-212ENST00000556516 CD68P34810 354 aaPredicted RBP7.57□□□□□ -1.2
PCNX1-212ENST00000556516 ARL4DP49703 201 aa7.57□□□□□ -1.2
PCNX1-212ENST00000556516 PPP2R3AQ06190 1150 aa7.57□□□□□ -1.2
PCNX1-212ENST00000556516 TRIM28Q13263 835 aaKnown RBP7.57□□□□□ -1.2
PCNX1-212ENST00000556516 TTBK2Q6IQ55 1244 aa7.57□□□□□ -1.2
PCNX1-212ENST00000556516 SV2BQ7L1I2 683 aa7.57□□□□□ -1.2
PCNX1-212ENST00000556516 HS2ST1Q7LGA3 356 aa7.57□□□□□ -1.2
PCNX1-212ENST00000556516 FBXO11Q86XK2 927 aa7.57□□□□□ -1.2
PCNX1-212ENST00000556516 NT5DC4Q86YG4 428 aa7.57□□□□□ -1.2
PCNX1-212ENST00000556516 BEND7Q8N7W2 519 aaPredicted RBP7.57□□□□□ -1.2
PCNX1-212ENST00000556516 NRSN2Q9GZP1 204 aa7.57□□□□□ -1.2
PCNX1-212ENST00000556516 ZFYVE1Q9HBF4 777 aa7.57□□□□□ -1.2
PCNX1-212ENST00000556516 PCDHB5Q9Y5E4 795 aa7.57□□□□□ -1.2
PCNX1-212ENST00000556516 DLL1O00548 723 aa7.56□□□□□ -1.2
PCNX1-212ENST00000556516 BMP6P22004 513 aa7.56□□□□□ -1.2
PCNX1-212ENST00000556516 LIG3P49916 1009 aa7.56□□□□□ -1.2
PCNX1-212ENST00000556516 FAM160A1Q05DH4 1040 aa7.56□□□□□ -1.2
PCNX1-212ENST00000556516 SUZ12Q15022 739 aaKnown RBP7.56□□□□□ -1.2
PCNX1-212ENST00000556516 OSGEPQ9NPF4 335 aa7.56□□□□□ -1.2
PCNX1-212ENST00000556516 LOC100289279A0A1B0GTE1 492 aa7.55□□□□□ -1.2
PCNX1-212ENST00000556516 NME2P22392 152 aa7.55□□□□□ -1.2
PCNX1-212ENST00000556516 GBP2P32456 591 aaPredicted RBP7.55□□□□□ -1.2
PCNX1-212ENST00000556516 POU4F3Q15319 338 aa7.55□□□□□ -1.2
PCNX1-212ENST00000556516 MAP1SQ66K74 1059 aaPredicted RBP7.55□□□□□ -1.2
PCNX1-212ENST00000556516 ERMP1Q7Z2K6 904 aa7.55□□□□□ -1.2
PCNX1-212ENST00000556516 AGGF1Q8N302 714 aaeCLIP7.55□□□□□ -1.2
PCNX1-212ENST00000556516 KLHL23Q8NBE8 558 aa7.55□□□□□ -1.2
PCNX1-212ENST00000556516 KCNB2Q92953 911 aa7.55□□□□□ -1.2
PCNX1-212ENST00000556516 NOC4LQ9BVI4 516 aaKnown RBP7.55□□□□□ -1.2
PCNX1-212ENST00000556516 SOX17Q9H6I2 414 aaPredicted RBP7.55□□□□□ -1.2
PCNX1-212ENST00000556516 ALX3O95076 343 aa7.54□□□□□ -1.2
PCNX1-212ENST00000556516 GSTP1P09211 210 aaKnown RBP7.54□□□□□ -1.2
PCNX1-212ENST00000556516 TFE3P19532 575 aaPredicted RBP7.54□□□□□ -1.2
PCNX1-212ENST00000556516 ARNTP27540 789 aa7.54□□□□□ -1.2
PCNX1-212ENST00000556516 ERCC5P28715 1186 aaPredicted RBP7.54□□□□□ -1.2
PCNX1-212ENST00000556516 RACK1P63244 317 aaKnown RBP7.54□□□□□ -1.2
PCNX1-212ENST00000556516 PTPN11Q06124 597 aaPredicted RBP7.54□□□□□ -1.2
PCNX1-212ENST00000556516 RAD51AP2Q09MP3 1159 aa7.54□□□□□ -1.2
PCNX1-212ENST00000556516 SEPT6Q14141 434 aa7.54□□□□□ -1.2
PCNX1-212ENST00000556516 DUOXA2Q1HG44 320 aa7.54□□□□□ -1.2
PCNX1-212ENST00000556516 PRRT3Q5FWE3 981 aa7.54□□□□□ -1.2
PCNX1-212ENST00000556516 PDZD3Q86UT5 571 aa7.54□□□□□ -1.2
PCNX1-212ENST00000556516 USP48Q86UV5 1035 aa7.54□□□□□ -1.2
PCNX1-212ENST00000556516 DTWD1Q8N5C7 304 aa7.54□□□□□ -1.2
PCNX1-212ENST00000556516 PHC3Q8NDX5 983 aa7.54□□□□□ -1.2
PCNX1-212ENST00000556516 ANKRD24Q8TF21 1146 aa7.54□□□□□ -1.2
PCNX1-212ENST00000556516 WNT8BQ93098 351 aa7.54□□□□□ -1.2
PCNX1-212ENST00000556516 WDR89Q96FK6 387 aaPredicted RBP7.54□□□□□ -1.2
PCNX1-212ENST00000556516 SCARF2Q96GP6 870 aaPredicted RBP7.54□□□□□ -1.2
PCNX1-212ENST00000556516 CORO1BQ9BR76 489 aa7.54□□□□□ -1.2
PCNX1-212ENST00000556516 CCDC86Q9H6F5 360 aaKnown RBP7.54□□□□□ -1.2
PCNX1-212ENST00000556516 METTL5Q9NRN9 209 aaKnown RBP7.54□□□□□ -1.2
PCNX1-212ENST00000556516 NOP53Q9NZM5 478 aaKnown RBP7.54□□□□□ -1.2
PCNX1-212ENST00000556516 PF4P02776 101 aa7.53□□□□□ -1.2
PCNX1-212ENST00000556516 ELNP15502 786 aa7.53□□□□□ -1.2
PCNX1-212ENST00000556516 SELPP16109 830 aa7.53□□□□□ -1.2
PCNX1-212ENST00000556516 LIG1P18858 919 aa7.53□□□□□ -1.2
PCNX1-212ENST00000556516 PDE3AQ14432 1141 aa7.53□□□□□ -1.2
PCNX1-212ENST00000556516 ACAD11Q709F0 780 aa7.53□□□□□ -1.2
PCNX1-212ENST00000556516 SPDYE3A6NKU9 549 aa7.52□□□□□ -1.21
PCNX1-212ENST00000556516 CYP11A1P05108 521 aa7.52□□□□□ -1.21
PCNX1-212ENST00000556516 TNNI2P48788 182 aa7.52□□□□□ -1.21
PCNX1-212ENST00000556516 CDK8P49336 464 aa7.52□□□□□ -1.21
PCNX1-212ENST00000556516 AP3B2Q13367 1082 aa7.52□□□□□ -1.21
PCNX1-212ENST00000556516 LLGL2Q6P1M3 1020 aa7.52□□□□□ -1.21
PCNX1-212ENST00000556516 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.52□□□□□ -1.21
PCNX1-212ENST00000556516 RELL1Q8IUW5 271 aa7.52□□□□□ -1.21
PCNX1-212ENST00000556516 MAP4K3Q8IVH8 894 aa7.52□□□□□ -1.21
PCNX1-212ENST00000556516 DDX54Q8TDD1 881 aaKnown RBP7.52□□□□□ -1.21
PCNX1-212ENST00000556516 TMEM74Q96NL1 305 aa7.52□□□□□ -1.21
PCNX1-212ENST00000556516 ACBD3Q9H3P7 528 aa7.52□□□□□ -1.21
PCNX1-212ENST00000556516 SRA1Q9HD15 236 aaKnown RBP7.52□□□□□ -1.21
PCNX1-212ENST00000556516 ADAMTS1Q9UHI8 967 aa7.52□□□□□ -1.21
PCNX1-212ENST00000556516 PIK3R2O00459 728 aa7.51□□□□□ -1.21
PCNX1-212ENST00000556516 SPATA31C1P0DKV0 1188 aa7.51□□□□□ -1.21
PCNX1-212ENST00000556516 ZNF252P-AS1Q0IIN9 211 aa7.51□□□□□ -1.21
PCNX1-212ENST00000556516 BNC2Q6ZN30 1099 aaPredicted RBP7.51□□□□□ -1.21
PCNX1-212ENST00000556516 AGMOQ6ZNB7 445 aa7.51□□□□□ -1.21
PCNX1-212ENST00000556516 KIAA1211Q6ZU35 1233 aa7.51□□□□□ -1.21
PCNX1-212ENST00000556516 GPBAR1Q8TDU6 330 aa7.51□□□□□ -1.21
PCNX1-212ENST00000556516 JARID2Q92833 1246 aaPredicted RBP7.51□□□□□ -1.21
PCNX1-212ENST00000556516 RHOVQ96L33 236 aa7.51□□□□□ -1.21
PCNX1-212ENST00000556516 RSRP1Q9BUV0 290 aa7.51□□□□□ -1.21
PCNX1-212ENST00000556516 DDX41Q9UJV9 622 aaKnown RBP7.51□□□□□ -1.21
PCNX1-212ENST00000556516 USP21Q9UK80 565 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms