RNA–Protein interactions for RNA: ENST00000556417.5

LINC00520-204, long intergenic non-protein coding RNA 520, humanhuman

TSL 3 BASIC

Gene LINC00520, Length 778 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00520-204ENST00000556417 TRIM17Q9Y577 477 aa11.27□□□□□ -0.61
LINC00520-204ENST00000556417 UTYO14607 1347 aa11.27□□□□□ -0.61
LINC00520-204ENST00000556417 CRKP46108 304 aa11.26□□□□□ -0.61
LINC00520-204ENST00000556417 CRHR2Q13324 411 aa11.26□□□□□ -0.61
LINC00520-204ENST00000556417 TNFAIP1Q13829 316 aa11.26□□□□□ -0.61
LINC00520-204ENST00000556417 GRIK5Q16478 980 aa11.26□□□□□ -0.61
LINC00520-204ENST00000556417 OTOP1Q7RTM1 612 aa11.26□□□□□ -0.61
LINC00520-204ENST00000556417 FBXO33Q7Z6M2 555 aa11.26□□□□□ -0.61
LINC00520-204ENST00000556417 MS4A4AQ96JQ5 239 aa11.26□□□□□ -0.61
LINC00520-204ENST00000556417 CAP1Q01518 475 aa11.25□□□□□ -0.61
LINC00520-204ENST00000556417 RABL6Q3YEC7 729 aaPredicted RBP11.25□□□□□ -0.61
LINC00520-204ENST00000556417 LRRC24Q50LG9 513 aa11.25□□□□□ -0.61
LINC00520-204ENST00000556417 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.25□□□□□ -0.61
LINC00520-204ENST00000556417 FAM9BQ8IZU0 186 aa11.25□□□□□ -0.61
LINC00520-204ENST00000556417 OPTNQ96CV9 577 aa11.25□□□□□ -0.61
LINC00520-204ENST00000556417 BICC1Q9H694 974 aaKnown RBP11.25□□□□□ -0.61
LINC00520-204ENST00000556417 ELP3Q9H9T3 547 aa11.25□□□□□ -0.61
LINC00520-204ENST00000556417 MROH5Q6ZUA9 1318 aa11.25□□□□□ -0.61
LINC00520-204ENST00000556417 TCP10L2B9ZVM9 353 aa11.24□□□□□ -0.61
LINC00520-204ENST00000556417 OTUD7BQ6GQQ9 843 aa11.24□□□□□ -0.61
LINC00520-204ENST00000556417 ANKRD44Q8N8A2 993 aa11.24□□□□□ -0.61
LINC00520-204ENST00000556417 CD99L2Q8TCZ2 262 aa11.24□□□□□ -0.61
LINC00520-204ENST00000556417 TMEM39BQ9GZU3 492 aa11.24□□□□□ -0.61
LINC00520-204ENST00000556417 PCDH10Q9P2E7 1040 aa11.24□□□□□ -0.61
LINC00520-204ENST00000556417 IQSEC3Q9UPP2 1182 aaPredicted RBP11.24□□□□□ -0.61
LINC00520-204ENST00000556417 PTPN22Q9Y2R2 807 aa11.24□□□□□ -0.61
LINC00520-204ENST00000556417 ZNF521Q96K83 1311 aa11.24□□□□□ -0.61
LINC00520-204ENST00000556417 A0A1B0GUL6 1792 aa11.23□□□□□ -0.61
LINC00520-204ENST00000556417 POTEFA5A3E0 1075 aa11.23□□□□□ -0.61
LINC00520-204ENST00000556417 PDE8BO95263 885 aa11.23□□□□□ -0.61
LINC00520-204ENST00000556417 MAP3K9P80192 1104 aa11.23□□□□□ -0.61
LINC00520-204ENST00000556417 HDLBPQ00341 1268 aaKnown RBP11.23□□□□□ -0.61
LINC00520-204ENST00000556417 SP3Q02447 781 aa11.23□□□□□ -0.61
LINC00520-204ENST00000556417 VGLL4Q14135 290 aa11.23□□□□□ -0.61
LINC00520-204ENST00000556417 INTS3Q68E01 1043 aaKnown RBP11.23□□□□□ -0.61
LINC00520-204ENST00000556417 VPS37DQ86XT2 251 aa11.23□□□□□ -0.61
LINC00520-204ENST00000556417 MRPL50Q8N5N7 158 aaKnown RBP11.23□□□□□ -0.61
LINC00520-204ENST00000556417 VGLL2Q8N8G2 317 aa11.23□□□□□ -0.61
LINC00520-204ENST00000556417 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.23□□□□□ -0.61
LINC00520-204ENST00000556417 ERO1AQ96HE7 468 aa11.23□□□□□ -0.61
LINC00520-204ENST00000556417 TNNI2P48788 182 aa11.22□□□□□ -0.61
LINC00520-204ENST00000556417 BCAMP50895 628 aa11.22□□□□□ -0.61
LINC00520-204ENST00000556417 CHAF1AQ13111 956 aaPredicted RBP11.22□□□□□ -0.61
LINC00520-204ENST00000556417 CAVIN4Q5BKX8 364 aa11.22□□□□□ -0.61
LINC00520-204ENST00000556417 METTL24Q5JXM2 366 aa11.22□□□□□ -0.61
LINC00520-204ENST00000556417 KLHDC4Q8TBB5 520 aa11.22□□□□□ -0.61
LINC00520-204ENST00000556417 BRI3BPQ8WY22 251 aa11.22□□□□□ -0.61
LINC00520-204ENST00000556417 MRIQ9BWK5 157 aa11.22□□□□□ -0.61
LINC00520-204ENST00000556417 EFCC1Q9HA90 598 aa11.22□□□□□ -0.61
LINC00520-204ENST00000556417 CACNA1FO60840 1977 aa11.21□□□□□ -0.61
LINC00520-204ENST00000556417 FRAT2O75474 233 aaPredicted RBP11.21□□□□□ -0.61
LINC00520-204ENST00000556417 GTF2A2P52657 109 aa11.21□□□□□ -0.61
LINC00520-204ENST00000556417 CACNB3P54284 484 aa11.21□□□□□ -0.61
LINC00520-204ENST00000556417 APOBEC3HQ6NTF7 200 aaKnown RBP11.21□□□□□ -0.61
LINC00520-204ENST00000556417 FAM43AQ8N2R8 423 aa11.21□□□□□ -0.61
LINC00520-204ENST00000556417 TBC1D22AQ8WUA7 517 aa11.21□□□□□ -0.61
LINC00520-204ENST00000556417 TEKT1Q969V4 418 aa11.21□□□□□ -0.61
LINC00520-204ENST00000556417 ARMC5Q96C12 935 aa11.21□□□□□ -0.61
LINC00520-204ENST00000556417 USP44Q9H0E7 712 aa11.21□□□□□ -0.61
LINC00520-204ENST00000556417 ECM29Q5VYK3 1845 aa11.21□□□□□ -0.62
LINC00520-204ENST00000556417 PTPRCP08575 1304 aa11.2□□□□□ -0.62
LINC00520-204ENST00000556417 CCL15-CCL14A0A0B4J2E2 113 aa11.2□□□□□ -0.62
LINC00520-204ENST00000556417 FGFR2P21802 821 aa11.2□□□□□ -0.62
LINC00520-204ENST00000556417 CCL15Q16663 113 aa11.2□□□□□ -0.62
LINC00520-204ENST00000556417 FAM83AQ86UY5 434 aa11.2□□□□□ -0.62
LINC00520-204ENST00000556417 OTUD5Q96G74 571 aa11.2□□□□□ -0.62
LINC00520-204ENST00000556417 ZDHHC15Q96MV8 337 aa11.2□□□□□ -0.62
LINC00520-204ENST00000556417 ZFYVE28Q9HCC9 887 aa11.2□□□□□ -0.62
LINC00520-204ENST00000556417 CSADQ9Y600 493 aa11.2□□□□□ -0.62
LINC00520-204ENST00000556417 LAMB1P07942 1786 aa11.19□□□□□ -0.62
LINC00520-204ENST00000556417 SPDYE5A6NIY4 337 aa11.19□□□□□ -0.62
LINC00520-204ENST00000556417 RFX5P48382 616 aaPredicted RBP11.19□□□□□ -0.62
LINC00520-204ENST00000556417 SSH1Q8WYL5 1049 aa11.19□□□□□ -0.62
LINC00520-204ENST00000556417 ZKSCAN4Q969J2 545 aaPredicted RBP11.19□□□□□ -0.62
LINC00520-204ENST00000556417 SUGT1Q9Y2Z0 365 aa11.19□□□□□ -0.62
LINC00520-204ENST00000556417 SNCAIPQ9Y6H5 919 aa11.19□□□□□ -0.62
LINC00520-204ENST00000556417 KIF16BQ96L93 1317 aa11.18□□□□□ -0.62
LINC00520-204ENST00000556417 IRF6O14896 467 aa11.18□□□□□ -0.62
LINC00520-204ENST00000556417 EN2P19622 333 aaPredicted RBP11.18□□□□□ -0.62
LINC00520-204ENST00000556417 PUM3Q15397 648 aaKnown RBP11.18□□□□□ -0.62
LINC00520-204ENST00000556417 TAF1CQ15572 869 aaPredicted RBP11.18□□□□□ -0.62
LINC00520-204ENST00000556417 FKBP1CQ5VVH2 108 aa11.18□□□□□ -0.62
LINC00520-204ENST00000556417 HHIPL2Q6UWX4 724 aa11.18□□□□□ -0.62
LINC00520-204ENST00000556417 ERO1BQ86YB8 467 aa11.18□□□□□ -0.62
LINC00520-204ENST00000556417 ZNF333Q96JL9 665 aa11.18□□□□□ -0.62
LINC00520-204ENST00000556417 BTBD19C9JJ37 291 aa11.17□□□□□ -0.62
LINC00520-204ENST00000556417 EYA2O00167 538 aa11.17□□□□□ -0.62
LINC00520-204ENST00000556417 TLR2O60603 784 aa11.17□□□□□ -0.62
LINC00520-204ENST00000556417 IFIT1P09914 478 aaKnown RBP11.17□□□□□ -0.62
LINC00520-204ENST00000556417 MIGA2Q7L4E1 593 aa11.17□□□□□ -0.62
LINC00520-204ENST00000556417 ATG9AQ7Z3C6 839 aa11.17□□□□□ -0.62
LINC00520-204ENST00000556417 LPIN2Q92539 896 aa11.17□□□□□ -0.62
LINC00520-204ENST00000556417 WRNIP1Q96S55 665 aa11.17□□□□□ -0.62
LINC00520-204ENST00000556417 PTCH2Q9Y6C5 1203 aa11.17□□□□□ -0.62
LINC00520-204ENST00000556417 MAST3O60307 1309 aa11.16□□□□□ -0.62
LINC00520-204ENST00000556417 E9PSI1 815 aa11.16□□□□□ -0.62
LINC00520-204ENST00000556417 CETPP11597 493 aa11.16□□□□□ -0.62
LINC00520-204ENST00000556417 SLFN5Q08AF3 891 aa11.16□□□□□ -0.62
LINC00520-204ENST00000556417 PPIL2Q13356 520 aa11.16□□□□□ -0.62
LINC00520-204ENST00000556417 SNAPC2Q13487 334 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms