RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 CC2D2BQ6DHV5 1058 aa9.29□□□□□ -0.92
ATXN3-236ENST00000556220 SH3BP5LQ7L8J4 393 aa9.29□□□□□ -0.92
ATXN3-236ENST00000556220 MORC1Q86VD1 984 aa9.29□□□□□ -0.92
ATXN3-236ENST00000556220 LARGE2Q8N3Y3 721 aa9.29□□□□□ -0.92
ATXN3-236ENST00000556220 ZIC5Q96T25 663 aa9.29□□□□□ -0.92
ATXN3-236ENST00000556220 ADARB2Q9NS39 739 aaKnown RBP9.29□□□□□ -0.92
ATXN3-236ENST00000556220 MAP4K5Q9Y4K4 846 aa9.29□□□□□ -0.92
ATXN3-236ENST00000556220 THSD7BQ9C0I4 1608 aa9.29□□□□□ -0.92
ATXN3-236ENST00000556220 COL11A2P13942 1736 aaPredicted RBP9.28□□□□□ -0.92
ATXN3-236ENST00000556220 ZIC2O95409 532 aaPredicted RBP9.28□□□□□ -0.92
ATXN3-236ENST00000556220 TRMT44Q8IYL2 757 aaKnown RBP9.28□□□□□ -0.92
ATXN3-236ENST00000556220 PGAP2Q9UHJ9 254 aa9.28□□□□□ -0.92
ATXN3-236ENST00000556220 NR3C2P08235 984 aa9.27□□□□□ -0.93
ATXN3-236ENST00000556220 HMOX1P09601 288 aa9.27□□□□□ -0.93
ATXN3-236ENST00000556220 CTDSPL2Q05D32 466 aa9.27□□□□□ -0.93
ATXN3-236ENST00000556220 SH3D19Q5HYK7 790 aa9.27□□□□□ -0.93
ATXN3-236ENST00000556220 IL17REQ8NFR9 667 aa9.27□□□□□ -0.93
ATXN3-236ENST00000556220 DDRGK1Q96HY6 314 aa9.27□□□□□ -0.93
ATXN3-236ENST00000556220 FMNL2Q96PY5 1086 aa9.27□□□□□ -0.93
ATXN3-236ENST00000556220 PURBQ96QR8 312 aaKnown RBP9.27□□□□□ -0.93
ATXN3-236ENST00000556220 POLR3GLQ9BT43 218 aa9.27□□□□□ -0.93
ATXN3-236ENST00000556220 GLIS2Q9BZE0 524 aaPredicted RBP9.27□□□□□ -0.93
ATXN3-236ENST00000556220 KDM4CQ9H3R0 1056 aa9.27□□□□□ -0.93
ATXN3-236ENST00000556220 PANK3Q9H999 370 aa9.27□□□□□ -0.93
ATXN3-236ENST00000556220 SAGE1Q9NXZ1 904 aa9.27□□□□□ -0.93
ATXN3-236ENST00000556220 GPRC5DQ9NZD1 345 aa9.27□□□□□ -0.93
ATXN3-236ENST00000556220 STK17AQ9UEE5 414 aa9.27□□□□□ -0.93
ATXN3-236ENST00000556220 NIP7Q9Y221 180 aaKnown RBP eCLIP9.27□□□□□ -0.93
ATXN3-236ENST00000556220 ZNF652Q9Y2D9 606 aa9.27□□□□□ -0.93
ATXN3-236ENST00000556220 SCN11AQ9UI33 1791 aa9.27□□□□□ -0.93
ATXN3-236ENST00000556220 LTBP1Q14766 1721 aa9.26□□□□□ -0.93
ATXN3-236ENST00000556220 SNED1Q8TER0 1413 aa9.26□□□□□ -0.93
ATXN3-236ENST00000556220 TEFQ10587 303 aa9.26□□□□□ -0.93
ATXN3-236ENST00000556220 CRY2Q49AN0 593 aa9.26□□□□□ -0.93
ATXN3-236ENST00000556220 CDC37L1Q7L3B6 337 aa9.26□□□□□ -0.93
ATXN3-236ENST00000556220 GCC1Q96CN9 775 aa9.26□□□□□ -0.93
ATXN3-236ENST00000556220 ITPKCQ96DU7 683 aa9.26□□□□□ -0.93
ATXN3-236ENST00000556220 ZFAND3Q9H8U3 227 aa9.26□□□□□ -0.93
ATXN3-236ENST00000556220 ZNF408Q9H9D4 720 aa9.26□□□□□ -0.93
ATXN3-236ENST00000556220 USP16Q9Y5T5 823 aa9.26□□□□□ -0.93
ATXN3-236ENST00000556220 FAM177BA6PVY3 158 aa9.25□□□□□ -0.93
ATXN3-236ENST00000556220 GTF2E1P29083 439 aaPredicted RBP9.25□□□□□ -0.93
ATXN3-236ENST00000556220 PIP4K2AP48426 406 aaPredicted RBP9.25□□□□□ -0.93
ATXN3-236ENST00000556220 HIRAP54198 1017 aaPredicted RBP9.25□□□□□ -0.93
ATXN3-236ENST00000556220 HUNKP57058 714 aa9.25□□□□□ -0.93
ATXN3-236ENST00000556220 NIM1KQ8IY84 436 aa9.25□□□□□ -0.93
ATXN3-236ENST00000556220 NBPF15Q8N660 670 aa9.25□□□□□ -0.93
ATXN3-236ENST00000556220 IRF7Q92985 503 aa9.25□□□□□ -0.93
ATXN3-236ENST00000556220 MAGEB6P1A0A0J9YX57 407 aa9.24□□□□□ -0.93
ATXN3-236ENST00000556220 FAM155AB1AL88 458 aaPredicted RBP9.24□□□□□ -0.93
ATXN3-236ENST00000556220 H3BM21 787 aa9.24□□□□□ -0.93
ATXN3-236ENST00000556220 KCNQ3O43525 872 aa9.24□□□□□ -0.93
ATXN3-236ENST00000556220 TRPA1O75762 1119 aa9.24□□□□□ -0.93
ATXN3-236ENST00000556220 HOXA10P31260 410 aaPredicted RBP9.24□□□□□ -0.93
ATXN3-236ENST00000556220 CXCL9Q07325 125 aa9.24□□□□□ -0.93
ATXN3-236ENST00000556220 PPP2R2DQ66LE6 453 aa9.24□□□□□ -0.93
ATXN3-236ENST00000556220 RGMBQ6NW40 437 aa9.24□□□□□ -0.93
ATXN3-236ENST00000556220 PDXDC2PQ6P474 469 aa9.24□□□□□ -0.93
ATXN3-236ENST00000556220 VASH1Q7L8A9 365 aaPredicted RBP9.24□□□□□ -0.93
ATXN3-236ENST00000556220 CTU1Q7Z7A3 348 aaKnown RBP9.24□□□□□ -0.93
ATXN3-236ENST00000556220 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.24□□□□□ -0.93
ATXN3-236ENST00000556220 VPS33BQ9H267 617 aa9.24□□□□□ -0.93
ATXN3-236ENST00000556220 RNF186Q9NXI6 227 aa9.24□□□□□ -0.93
ATXN3-236ENST00000556220 COL4A5P29400 1685 aa9.23□□□□□ -0.93
ATXN3-236ENST00000556220 GNAT3A8MTJ3 354 aa9.23□□□□□ -0.93
ATXN3-236ENST00000556220 PPIP5K2O43314 1243 aa9.23□□□□□ -0.93
ATXN3-236ENST00000556220 GMPSP49915 693 aaPredicted RBP9.23□□□□□ -0.93
ATXN3-236ENST00000556220 KIF23Q02241 960 aaPredicted RBP9.23□□□□□ -0.93
ATXN3-236ENST00000556220 USP48Q86UV5 1035 aa9.23□□□□□ -0.93
ATXN3-236ENST00000556220 FAM117AQ9C073 453 aa9.23□□□□□ -0.93
ATXN3-236ENST00000556220 ZNRF3Q9ULT6 936 aa9.23□□□□□ -0.93
ATXN3-236ENST00000556220 CACNA1SQ13698 1873 aa9.23□□□□□ -0.93
ATXN3-236ENST00000556220 ARFGEF2Q9Y6D5 1785 aa9.22□□□□□ -0.93
ATXN3-236ENST00000556220 TRPM7Q96QT4 1865 aa9.22□□□□□ -0.93
ATXN3-236ENST00000556220 BTBD11A6QL63 1104 aa9.22□□□□□ -0.93
ATXN3-236ENST00000556220 UPP2O95045 317 aa9.22□□□□□ -0.93
ATXN3-236ENST00000556220 FSHRP23945 695 aa9.22□□□□□ -0.93
ATXN3-236ENST00000556220 PKN2Q16513 984 aaKnown RBP9.22□□□□□ -0.93
ATXN3-236ENST00000556220 HLFQ16534 295 aa9.22□□□□□ -0.93
ATXN3-236ENST00000556220 AOC3Q16853 763 aa9.22□□□□□ -0.93
ATXN3-236ENST00000556220 HABP4Q5JVS0 413 aaKnown RBP9.22□□□□□ -0.93
ATXN3-236ENST00000556220 TRPM4Q8TD43 1214 aa9.22□□□□□ -0.93
ATXN3-236ENST00000556220 RPGRQ92834 1020 aaKnown RBP9.22□□□□□ -0.93
ATXN3-236ENST00000556220 RBM17Q96I25 401 aaKnown RBP9.22□□□□□ -0.93
ATXN3-236ENST00000556220 CSRNP1Q96S65 589 aa9.22□□□□□ -0.93
ATXN3-236ENST00000556220 NYXQ9GZU5 481 aa9.22□□□□□ -0.93
ATXN3-236ENST00000556220 FKBPLQ9UIM3 349 aa9.22□□□□□ -0.93
ATXN3-236ENST00000556220 SCN7AQ01118 1682 aa9.22□□□□□ -0.93
ATXN3-236ENST00000556220 NPC1L1Q9UHC9 1359 aa9.22□□□□□ -0.93
ATXN3-236ENST00000556220 MKI67P46013 3256 aaKnown RBP9.21□□□□□ -0.93
ATXN3-236ENST00000556220 PRAMEF22A3QJZ6 481 aa9.21□□□□□ -0.94
ATXN3-236ENST00000556220 TCERG1O14776 1098 aaKnown RBP9.21□□□□□ -0.94
ATXN3-236ENST00000556220 SNRPA1P09661 255 aaKnown RBP9.21□□□□□ -0.94
ATXN3-236ENST00000556220 NBPF10Q6P3W6 841 aaKnown RBP9.21□□□□□ -0.94
ATXN3-236ENST00000556220 PROCA1Q8NCQ7 364 aaPredicted RBP9.21□□□□□ -0.94
ATXN3-236ENST00000556220 GAS2L2Q8NHY3 880 aa9.21□□□□□ -0.94
ATXN3-236ENST00000556220 LRRN4Q8WUT4 740 aa9.21□□□□□ -0.94
ATXN3-236ENST00000556220 CRAMP1Q96RY5 1269 aa9.21□□□□□ -0.94
ATXN3-236ENST00000556220 BCL2L13Q9BXK5 485 aa9.21□□□□□ -0.94
ATXN3-236ENST00000556220 CNOT7Q9UIV1 285 aaKnown RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 170.5 ms