RNA–Protein interactions for RNA: ENST00000556079.1

TMEM260-209, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 596 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-209ENST00000556079 HUNKP57058 714 aa8.02□□□□□ -1.13
TMEM260-209ENST00000556079 ZNF280AP59817 542 aaPredicted RBP8.02□□□□□ -1.13
TMEM260-209ENST00000556079 ANGEL2Q5VTE6 544 aaKnown RBP8.02□□□□□ -1.13
TMEM260-209ENST00000556079 CDC37L1Q7L3B6 337 aa8.02□□□□□ -1.13
TMEM260-209ENST00000556079 PDCD7Q8N8D1 485 aaKnown RBP8.02□□□□□ -1.13
TMEM260-209ENST00000556079 VGLL2Q8N8G2 317 aa8.02□□□□□ -1.13
TMEM260-209ENST00000556079 SLAIN1Q8ND83 568 aa8.02□□□□□ -1.13
TMEM260-209ENST00000556079 DPF2Q92785 391 aa8.02□□□□□ -1.13
TMEM260-209ENST00000556079 ANKRD2Q9GZV1 360 aa8.02□□□□□ -1.13
TMEM260-209ENST00000556079 C1orf115Q9H7X2 142 aa8.02□□□□□ -1.13
TMEM260-209ENST00000556079 MYOZ2Q9NPC6 264 aa8.02□□□□□ -1.13
TMEM260-209ENST00000556079 LEMD3Q9Y2U8 911 aa8.02□□□□□ -1.13
TMEM260-209ENST00000556079 USP17L8P0C7I0 530 aa8.01□□□□□ -1.13
TMEM260-209ENST00000556079 UBTFL1P0CB47 393 aaPredicted RBP8.01□□□□□ -1.13
TMEM260-209ENST00000556079 RPS12P25398 132 aaKnown RBP8.01□□□□□ -1.13
TMEM260-209ENST00000556079 PTPN12Q05209 780 aaKnown RBP8.01□□□□□ -1.13
TMEM260-209ENST00000556079 METTL24Q5JXM2 366 aa8.01□□□□□ -1.13
TMEM260-209ENST00000556079 TTLL5Q6EMB2 1281 aa8.01□□□□□ -1.13
TMEM260-209ENST00000556079 ATG9AQ7Z3C6 839 aa8.01□□□□□ -1.13
TMEM260-209ENST00000556079 KRT26Q7Z3Y9 468 aa8.01□□□□□ -1.13
TMEM260-209ENST00000556079 TMEM57Q8N5G2 664 aa8.01□□□□□ -1.13
TMEM260-209ENST00000556079 ZC3H15Q8WU90 426 aaKnown RBP8.01□□□□□ -1.13
TMEM260-209ENST00000556079 FAM163AQ96GL9 167 aaPredicted RBP8.01□□□□□ -1.13
TMEM260-209ENST00000556079 HHIPL1Q96JK4 782 aa8.01□□□□□ -1.13
TMEM260-209ENST00000556079 FAM84BQ96KN1 310 aaPredicted RBP8.01□□□□□ -1.13
TMEM260-209ENST00000556079 COA1Q9GZY4 146 aa8.01□□□□□ -1.13
TMEM260-209ENST00000556079 MKI67P46013 3256 aaKnown RBP8.01□□□□□ -1.13
TMEM260-209ENST00000556079 ZNF609O15014 1411 aa8.01□□□□□ -1.13
TMEM260-209ENST00000556079 ECM29Q5VYK3 1845 aa8.01□□□□□ -1.13
TMEM260-209ENST00000556079 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8□□□□□ -1.13
TMEM260-209ENST00000556079 CA12O43570 354 aa8□□□□□ -1.13
TMEM260-209ENST00000556079 ADORA1P30542 326 aa8□□□□□ -1.13
TMEM260-209ENST00000556079 BCAMP50895 628 aa8□□□□□ -1.13
TMEM260-209ENST00000556079 CHAF1AQ13111 956 aaPredicted RBP8□□□□□ -1.13
TMEM260-209ENST00000556079 STRIP1Q5VSL9 837 aa8□□□□□ -1.13
TMEM260-209ENST00000556079 PODNQ7Z5L7 613 aa8□□□□□ -1.13
TMEM260-209ENST00000556079 CDAN1Q8IWY9 1227 aa8□□□□□ -1.13
TMEM260-209ENST00000556079 EFCAB3Q8N7B9 438 aa8□□□□□ -1.13
TMEM260-209ENST00000556079 AGBL3Q8NEM8 1001 aa8□□□□□ -1.13
TMEM260-209ENST00000556079 CDCA5Q96FF9 252 aa8□□□□□ -1.13
TMEM260-209ENST00000556079 ZFP91Q96JP5 570 aaPredicted RBP8□□□□□ -1.13
TMEM260-209ENST00000556079 API5Q9BZZ5 524 aaKnown RBP8□□□□□ -1.13
TMEM260-209ENST00000556079 ZBTB4Q9P1Z0 1013 aaPredicted RBP8□□□□□ -1.13
TMEM260-209ENST00000556079 SSC5DA1L4H1 1573 aa8□□□□□ -1.13
TMEM260-209ENST00000556079 ZBED9Q6R2W3 1325 aa8□□□□□ -1.13
TMEM260-209ENST00000556079 CENPFP49454 3210 aa7.99□□□□□ -1.13
TMEM260-209ENST00000556079 PNMA6EA0A0J9YXQ4 647 aa7.99□□□□□ -1.13
TMEM260-209ENST00000556079 CLRN2A0PK11 232 aa7.99□□□□□ -1.13
TMEM260-209ENST00000556079 FAM155AB1AL88 458 aaPredicted RBP7.99□□□□□ -1.13
TMEM260-209ENST00000556079 CT47B1P0C2W7 299 aaPredicted RBP7.99□□□□□ -1.13
TMEM260-209ENST00000556079 IL1R1P14778 569 aa7.99□□□□□ -1.13
TMEM260-209ENST00000556079 SOX10P56693 466 aa7.99□□□□□ -1.13
TMEM260-209ENST00000556079 KIF23Q02241 960 aaPredicted RBP7.99□□□□□ -1.13
TMEM260-209ENST00000556079 NOGQ13253 232 aa7.99□□□□□ -1.13
TMEM260-209ENST00000556079 PRKG1Q13976 671 aa7.99□□□□□ -1.13
TMEM260-209ENST00000556079 INTS3Q68E01 1043 aaKnown RBP7.99□□□□□ -1.13
TMEM260-209ENST00000556079 RGMBQ6NW40 437 aa7.99□□□□□ -1.13
TMEM260-209ENST00000556079 ATF7IPQ6VMQ6 1270 aa7.99□□□□□ -1.13
TMEM260-209ENST00000556079 C15orf52Q6ZUT6 534 aaKnown RBP7.99□□□□□ -1.13
TMEM260-209ENST00000556079 ZNF804AQ7Z570 1209 aa7.99□□□□□ -1.13
TMEM260-209ENST00000556079 PANK1Q8TE04 598 aa7.99□□□□□ -1.13
TMEM260-209ENST00000556079 ZBED3Q96IU2 234 aaPredicted RBP7.99□□□□□ -1.13
TMEM260-209ENST00000556079 KIF16BQ96L93 1317 aa7.99□□□□□ -1.13
TMEM260-209ENST00000556079 OTOFQ9HC10 1997 aa7.99□□□□□ -1.13
TMEM260-209ENST00000556079 EYA2O00167 538 aa7.98□□□□□ -1.13
TMEM260-209ENST00000556079 WNT10BO00744 389 aa7.98□□□□□ -1.13
TMEM260-209ENST00000556079 TRPA1O75762 1119 aa7.98□□□□□ -1.13
TMEM260-209ENST00000556079 FGFR2P21802 821 aa7.98□□□□□ -1.13
TMEM260-209ENST00000556079 HIBADHP31937 336 aaKnown RBP7.98□□□□□ -1.13
TMEM260-209ENST00000556079 FBXO33Q7Z6M2 555 aa7.98□□□□□ -1.13
TMEM260-209ENST00000556079 TDRD7Q8NHU6 1098 aaKnown RBP7.98□□□□□ -1.13
TMEM260-209ENST00000556079 DCPSQ96C86 337 aaKnown RBP7.98□□□□□ -1.13
TMEM260-209ENST00000556079 GBA2Q9HCG7 927 aaPredicted RBP7.98□□□□□ -1.13
TMEM260-209ENST00000556079 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.98□□□□□ -1.13
TMEM260-209ENST00000556079 BRCA2P51587 3418 aa7.98□□□□□ -1.13
TMEM260-209ENST00000556079 MROH5Q6ZUA9 1318 aa7.98□□□□□ -1.13
TMEM260-209ENST00000556079 HTTP42858 3142 aa7.98□□□□□ -1.13
TMEM260-209ENST00000556079 MYO5AQ9Y4I1 1855 aaKnown RBP7.98□□□□□ -1.13
TMEM260-209ENST00000556079 UBE2Q2LH0YL09 131 aa7.97□□□□□ -1.13
TMEM260-209ENST00000556079 PDE8BO95263 885 aa7.97□□□□□ -1.13
TMEM260-209ENST00000556079 PHKA1P46020 1223 aa7.97□□□□□ -1.13
TMEM260-209ENST00000556079 ZNF157P51786 506 aaPredicted RBP7.97□□□□□ -1.13
TMEM260-209ENST00000556079 CACNB3P54284 484 aa7.97□□□□□ -1.13
TMEM260-209ENST00000556079 UBE4AQ14139 1066 aa7.97□□□□□ -1.13
TMEM260-209ENST00000556079 CFAP100Q494V2 611 aa7.97□□□□□ -1.13
TMEM260-209ENST00000556079 SULF1Q8IWU6 871 aa7.97□□□□□ -1.13
TMEM260-209ENST00000556079 PRMT6Q96LA8 375 aaPredicted RBP7.97□□□□□ -1.13
TMEM260-209ENST00000556079 RNF186Q9NXI6 227 aa7.97□□□□□ -1.13
TMEM260-209ENST00000556079 PAPPA2Q9BXP8 1791 aa7.97□□□□□ -1.13
TMEM260-209ENST00000556079 SRGAP3O43295 1099 aa7.96□□□□□ -1.14
TMEM260-209ENST00000556079 TFCP2Q12800 502 aa7.96□□□□□ -1.14
TMEM260-209ENST00000556079 PUM3Q15397 648 aaKnown RBP7.96□□□□□ -1.14
TMEM260-209ENST00000556079 ATP2B3Q16720 1220 aa7.96□□□□□ -1.14
TMEM260-209ENST00000556079 MFSD14BQ5SR56 506 aa7.96□□□□□ -1.14
TMEM260-209ENST00000556079 C20orf194Q5TEA3 1177 aa7.96□□□□□ -1.14
TMEM260-209ENST00000556079 ZKSCAN2Q63HK3 967 aa7.96□□□□□ -1.14
TMEM260-209ENST00000556079 PI16Q6UXB8 463 aa7.96□□□□□ -1.14
TMEM260-209ENST00000556079 C2orf69Q8N8R5 385 aa7.96□□□□□ -1.14
TMEM260-209ENST00000556079 ARHGAP45Q92619 1136 aa7.96□□□□□ -1.14
TMEM260-209ENST00000556079 CSRNP1Q96S65 589 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms